RNA–Protein interactions for RNA: ENST00000451405.1

RPUSD3-209, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-209ENST00000451405 TTYH1Q9H313 450 aaPredicted RBP19.46■□□□□ 0.71
RPUSD3-209ENST00000451405 CTDP1Q9Y5B0 961 aaPredicted RBP19.46■□□□□ 0.71
RPUSD3-209ENST00000451405 PRUNE2Q8WUY3 3088 aa19.45■□□□□ 0.7
RPUSD3-209ENST00000451405 ORC4O43929 436 aa19.45■□□□□ 0.7
RPUSD3-209ENST00000451405 SNAI1O95863 264 aaPredicted RBP19.45■□□□□ 0.7
RPUSD3-209ENST00000451405 ADCYAP1R1P41586 468 aa19.45■□□□□ 0.7
RPUSD3-209ENST00000451405 NOVP48745 357 aa19.45■□□□□ 0.7
RPUSD3-209ENST00000451405 KCTD1Q719H9 257 aa19.45■□□□□ 0.7
RPUSD3-209ENST00000451405 TICAM2Q86XR7 235 aa19.45■□□□□ 0.7
RPUSD3-209ENST00000451405 STAG1Q8WVM7 1258 aa19.45■□□□□ 0.7
RPUSD3-209ENST00000451405 FERMT2Q96AC1 680 aa19.45■□□□□ 0.7
RPUSD3-209ENST00000451405 NRBP1Q9UHY1 535 aa19.45■□□□□ 0.7
RPUSD3-209ENST00000451405 ISY1Q9ULR0 285 aaKnown RBP19.45■□□□□ 0.7
RPUSD3-209ENST00000451405 SDSP20132 328 aa19.44■□□□□ 0.7
RPUSD3-209ENST00000451405 COL9A1P20849 921 aa19.44■□□□□ 0.7
RPUSD3-209ENST00000451405 SLC1A4P43007 532 aa19.44■□□□□ 0.7
RPUSD3-209ENST00000451405 STAT2P52630 851 aa19.44■□□□□ 0.7
RPUSD3-209ENST00000451405 SNAP25P60880 206 aa19.44■□□□□ 0.7
RPUSD3-209ENST00000451405 RCSD1Q6JBY9 416 aa19.44■□□□□ 0.7
RPUSD3-209ENST00000451405 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.44■□□□□ 0.7
RPUSD3-209ENST00000451405 CHURC1Q8WUH1 139 aa19.44■□□□□ 0.7
RPUSD3-209ENST00000451405 LENG1Q96BZ8 264 aaPredicted RBP19.44■□□□□ 0.7
RPUSD3-209ENST00000451405 FGD4Q96M96 766 aa19.44■□□□□ 0.7
RPUSD3-209ENST00000451405 AGBL1Q96MI9 1066 aa19.44■□□□□ 0.7
RPUSD3-209ENST00000451405 OSBPL3Q9H4L5 887 aa19.44■□□□□ 0.7
RPUSD3-209ENST00000451405 ZNF536O15090 1300 aa19.44■□□□□ 0.7
RPUSD3-209ENST00000451405 PGK1P00558 417 aa19.43■□□□□ 0.7
RPUSD3-209ENST00000451405 OAZ1P54368 228 aa19.43■□□□□ 0.7
RPUSD3-209ENST00000451405 HAND2P61296 217 aa19.43■□□□□ 0.7
RPUSD3-209ENST00000451405 TRIM60Q495X7 471 aa19.43■□□□□ 0.7
RPUSD3-209ENST00000451405 RRP12Q5JTH9 1297 aaKnown RBP19.43■□□□□ 0.7
RPUSD3-209ENST00000451405 MAMDC4Q6UXC1 1216 aa19.43■□□□□ 0.7
RPUSD3-209ENST00000451405 FAM160B2Q86V87 743 aa19.43■□□□□ 0.7
RPUSD3-209ENST00000451405 ANKRD35Q8N283 1001 aa19.43■□□□□ 0.7
RPUSD3-209ENST00000451405 CHST13Q8NET6 341 aa19.43■□□□□ 0.7
RPUSD3-209ENST00000451405 XPNPEP3Q9NQH7 507 aa19.43■□□□□ 0.7
RPUSD3-209ENST00000451405 TOMM22Q9NS69 142 aa19.43■□□□□ 0.7
RPUSD3-209ENST00000451405 HOMER2Q9NSB8 354 aa19.43■□□□□ 0.7
RPUSD3-209ENST00000451405 MTMR7Q9Y216 660 aa19.43■□□□□ 0.7
RPUSD3-209ENST00000451405 SUPT16HQ9Y5B9 1047 aaKnown RBP19.43■□□□□ 0.7
RPUSD3-209ENST00000451405 TNFRSF10AO00220 468 aa19.42■□□□□ 0.7
RPUSD3-209ENST00000451405 PLA2G6O60733 806 aa19.42■□□□□ 0.7
RPUSD3-209ENST00000451405 FDX1P10109 184 aa19.42■□□□□ 0.7
RPUSD3-209ENST00000451405 RARBP10826 455 aa19.42■□□□□ 0.7
RPUSD3-209ENST00000451405 IKQ13123 557 aaPredicted RBP19.42■□□□□ 0.7
RPUSD3-209ENST00000451405 TJAP1Q5JTD0 557 aa19.42■□□□□ 0.7
RPUSD3-209ENST00000451405 RNPC3Q96LT9 517 aaKnown RBP19.42■□□□□ 0.7
RPUSD3-209ENST00000451405 CCDC171Q6TFL3 1326 aa19.42■□□□□ 0.7
RPUSD3-209ENST00000451405 SPTBN5Q9NRC6 3674 aaKnown RBP19.42■□□□□ 0.7
RPUSD3-209ENST00000451405 AKR1A1P14550 325 aa19.41■□□□□ 0.7
RPUSD3-209ENST00000451405 CNTN2Q02246 1040 aa19.41■□□□□ 0.7
RPUSD3-209ENST00000451405 PPP4R3BQ5MIZ7 849 aa19.41■□□□□ 0.7
RPUSD3-209ENST00000451405 TTBK2Q6IQ55 1244 aa19.41■□□□□ 0.7
RPUSD3-209ENST00000451405 ZNF467Q7Z7K2 595 aaPredicted RBP19.41■□□□□ 0.7
RPUSD3-209ENST00000451405 MSL3Q8N5Y2 521 aaKnown RBP19.41■□□□□ 0.7
RPUSD3-209ENST00000451405 TMEM47Q9BQJ4 181 aa19.41■□□□□ 0.7
RPUSD3-209ENST00000451405 FBXO40Q9UH90 709 aa19.41■□□□□ 0.7
RPUSD3-209ENST00000451405 PRR12Q9ULL5 1215 aa19.41■□□□□ 0.7
RPUSD3-209ENST00000451405 CNPY2Q9Y2B0 182 aa19.41■□□□□ 0.7
RPUSD3-209ENST00000451405 SYNGAP1Q96PV0 1343 aa19.41■□□□□ 0.7
RPUSD3-209ENST00000451405 TMEM265A0A087WTH1 108 aa19.4■□□□□ 0.7
RPUSD3-209ENST00000451405 CCDC174Q6PII3 467 aa19.4■□□□□ 0.7
RPUSD3-209ENST00000451405 SH3RF1Q7Z6J0 888 aa19.4■□□□□ 0.7
RPUSD3-209ENST00000451405 PDLIM7Q9NR12 457 aa19.4■□□□□ 0.7
RPUSD3-209ENST00000451405 TCP11L1Q9NUJ3 509 aa19.4■□□□□ 0.7
RPUSD3-209ENST00000451405 PHF24Q9UPV7 400 aa19.4■□□□□ 0.7
RPUSD3-209ENST00000451405 TRIM43BA6NCK2 446 aa19.39■□□□□ 0.69
RPUSD3-209ENST00000451405 ADCY6O43306 1168 aa19.39■□□□□ 0.69
RPUSD3-209ENST00000451405 ADAMTS4O75173 837 aa19.39■□□□□ 0.69
RPUSD3-209ENST00000451405 SLC16A2P36021 539 aa19.39■□□□□ 0.69
RPUSD3-209ENST00000451405 IRX5P78411 483 aaPredicted RBP19.39■□□□□ 0.69
RPUSD3-209ENST00000451405 ACVR2BQ13705 512 aa19.39■□□□□ 0.69
RPUSD3-209ENST00000451405 SNX17Q15036 470 aa19.39■□□□□ 0.69
RPUSD3-209ENST00000451405 MUM1L1Q5H9M0 696 aa19.39■□□□□ 0.69
RPUSD3-209ENST00000451405 AKNAD1Q5T1N1 836 aa19.39■□□□□ 0.69
RPUSD3-209ENST00000451405 CWC27Q6UX04 472 aaKnown RBP19.39■□□□□ 0.69
RPUSD3-209ENST00000451405 TBC1D10CQ8IV04 446 aa19.39■□□□□ 0.69
RPUSD3-209ENST00000451405 TRIM43Q96BQ3 446 aaPredicted RBP19.39■□□□□ 0.69
RPUSD3-209ENST00000451405 A1CFQ9NQ94 594 aaKnown RBP19.39■□□□□ 0.69
RPUSD3-209ENST00000451405 RNF146Q9NTX7 359 aa19.39■□□□□ 0.69
RPUSD3-209ENST00000451405 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.39■□□□□ 0.69
RPUSD3-209ENST00000451405 ZHX1Q9UKY1 873 aaPredicted RBP19.39■□□□□ 0.69
RPUSD3-209ENST00000451405 FAM184BQ9ULE4 1060 aa19.39■□□□□ 0.69
RPUSD3-209ENST00000451405 ZMYM6O95789 1325 aa19.39■□□□□ 0.69
RPUSD3-209ENST00000451405 MCM3APO60318 1980 aa19.39■□□□□ 0.69
RPUSD3-209ENST00000451405 SOWAHBA6NEL2 793 aa19.38■□□□□ 0.69
RPUSD3-209ENST00000451405 ALAS1P13196 640 aa19.38■□□□□ 0.69
RPUSD3-209ENST00000451405 TLE2Q04725 743 aa19.38■□□□□ 0.69
RPUSD3-209ENST00000451405 RNF180Q86T96 592 aa19.38■□□□□ 0.69
RPUSD3-209ENST00000451405 FAM133AQ8N9E0 248 aa19.38■□□□□ 0.69
RPUSD3-209ENST00000451405 DCAF4Q8WV16 495 aa19.38■□□□□ 0.69
RPUSD3-209ENST00000451405 TRERF1Q96PN7 1200 aa19.38■□□□□ 0.69
RPUSD3-209ENST00000451405 ACAD9Q9H845 621 aa19.38■□□□□ 0.69
RPUSD3-209ENST00000451405 DDX49Q9Y6V7 483 aaKnown RBP19.38■□□□□ 0.69
RPUSD3-209ENST00000451405 SYNRGQ9UMZ2 1314 aa19.37■□□□□ 0.69
RPUSD3-209ENST00000451405 TOP1P11387 765 aaKnown RBP19.37■□□□□ 0.69
RPUSD3-209ENST00000451405 PDE4AP27815 886 aa19.37■□□□□ 0.69
RPUSD3-209ENST00000451405 CCDC96Q2M329 555 aa19.37■□□□□ 0.69
RPUSD3-209ENST00000451405 MFSD6Q6ZSS7 791 aa19.37■□□□□ 0.69
RPUSD3-209ENST00000451405 ARMCX2Q7L311 632 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms