RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 ZNF536O15090 1300 aa7.55□□□□□ -1.2
USP46-202ENST00000451218 ESPNB1AK53 854 aa7.55□□□□□ -1.2
USP46-202ENST00000451218 ZBTB7AO95365 584 aa7.55□□□□□ -1.2
USP46-202ENST00000451218 ECE1P42892 770 aa7.55□□□□□ -1.2
USP46-202ENST00000451218 NBPF9Q3BBW0 867 aa7.55□□□□□ -1.2
USP46-202ENST00000451218 CCDC93Q567U6 631 aa7.55□□□□□ -1.2
USP46-202ENST00000451218 TTC38Q5R3I4 469 aa7.55□□□□□ -1.2
USP46-202ENST00000451218 PAGE5Q96GU1 130 aa7.55□□□□□ -1.2
USP46-202ENST00000451218 ZKSCAN5Q9Y2L8 839 aa7.55□□□□□ -1.2
USP46-202ENST00000451218 ATP1A3P13637 1013 aa7.55□□□□□ -1.2
USP46-202ENST00000451218 PBX1P40424 430 aa7.55□□□□□ -1.2
USP46-202ENST00000451218 EIF6P56537 245 aaKnown RBP7.55□□□□□ -1.2
USP46-202ENST00000451218 GMCL1Q96IK5 515 aa7.55□□□□□ -1.2
USP46-202ENST00000451218 CEP350Q5VT06 3117 aa7.55□□□□□ -1.2
USP46-202ENST00000451218 USP17L10C9JJH3 530 aa7.55□□□□□ -1.2
USP46-202ENST00000451218 CTAGE5O15320 804 aa7.55□□□□□ -1.2
USP46-202ENST00000451218 TCP10Q12799 353 aa7.55□□□□□ -1.2
USP46-202ENST00000451218 SEPT2Q15019 361 aa7.55□□□□□ -1.2
USP46-202ENST00000451218 STK38Q15208 465 aa7.55□□□□□ -1.2
USP46-202ENST00000451218 TRIM22Q8IYM9 498 aa7.55□□□□□ -1.2
USP46-202ENST00000451218 SPDYE1Q8NFV5 336 aaPredicted RBP7.55□□□□□ -1.2
USP46-202ENST00000451218 UBE2Q2Q8WVN8 375 aa7.55□□□□□ -1.2
USP46-202ENST00000451218 UPF1Q92900 1129 aaKnown RBP eCLIP7.55□□□□□ -1.2
USP46-202ENST00000451218 NUDT12Q9BQG2 462 aa7.55□□□□□ -1.2
USP46-202ENST00000451218 MKNK2Q9HBH9 465 aa7.55□□□□□ -1.2
USP46-202ENST00000451218 MGAMO43451 1857 aa7.54□□□□□ -1.2
USP46-202ENST00000451218 CCZ1BP86790 482 aa7.54□□□□□ -1.2
USP46-202ENST00000451218 CCZ1P86791 482 aaPredicted RBP7.54□□□□□ -1.2
USP46-202ENST00000451218 DGKZQ13574 1117 aa7.54□□□□□ -1.2
USP46-202ENST00000451218 ZNF174Q15697 407 aa7.54□□□□□ -1.2
USP46-202ENST00000451218 STX1AQ16623 288 aa7.54□□□□□ -1.2
USP46-202ENST00000451218 SLF2Q8IX21 1173 aa7.54□□□□□ -1.2
USP46-202ENST00000451218 ZNF830Q96NB3 372 aaPredicted RBP7.54□□□□□ -1.2
USP46-202ENST00000451218 TMEM39BQ9GZU3 492 aa7.54□□□□□ -1.2
USP46-202ENST00000451218 MTFR1LQ9H019 292 aa7.54□□□□□ -1.2
USP46-202ENST00000451218 SCAF8Q9UPN6 1271 aaKnown RBP7.54□□□□□ -1.2
USP46-202ENST00000451218 PPIP5K2O43314 1243 aa7.54□□□□□ -1.2
USP46-202ENST00000451218 RAD17O75943 681 aa7.54□□□□□ -1.2
USP46-202ENST00000451218 RASSF7Q02833 373 aa7.54□□□□□ -1.2
USP46-202ENST00000451218 FKBP1CQ5VVH2 108 aa7.54□□□□□ -1.2
USP46-202ENST00000451218 IRF2BP1Q8IU81 584 aa7.54□□□□□ -1.2
USP46-202ENST00000451218 RTKN2Q8IZC4 609 aa7.54□□□□□ -1.2
USP46-202ENST00000451218 CTCFLQ8NI51 663 aaPredicted RBP7.54□□□□□ -1.2
USP46-202ENST00000451218 COA7Q96BR5 231 aa7.54□□□□□ -1.2
USP46-202ENST00000451218 PNMA5Q96PV4 448 aa7.54□□□□□ -1.2
USP46-202ENST00000451218 DHX36Q9H2U1 1008 aaKnown RBP7.54□□□□□ -1.2
USP46-202ENST00000451218 TMX1Q9H3N1 280 aa7.54□□□□□ -1.2
USP46-202ENST00000451218 POLR2DO15514 142 aaKnown RBP7.54□□□□□ -1.2
USP46-202ENST00000451218 SYKP43405 635 aa7.54□□□□□ -1.2
USP46-202ENST00000451218 ZNF165P49910 485 aa7.54□□□□□ -1.2
USP46-202ENST00000451218 GHRHRQ02643 423 aa7.54□□□□□ -1.2
USP46-202ENST00000451218 TBX2Q13207 712 aaPredicted RBP7.54□□□□□ -1.2
USP46-202ENST00000451218 ASPRV1Q53RT3 343 aa7.54□□□□□ -1.2
USP46-202ENST00000451218 ARL6IP4Q66PJ3 421 aaKnown RBP7.54□□□□□ -1.2
USP46-202ENST00000451218 DEFB129Q9H1M3 183 aa7.54□□□□□ -1.2
USP46-202ENST00000451218 RIC8AQ9NPQ8 531 aa7.54□□□□□ -1.2
USP46-202ENST00000451218 BLOC1S4Q9NUP1 217 aa7.54□□□□□ -1.2
USP46-202ENST00000451218 KBTBD4Q9NVX7 518 aa7.54□□□□□ -1.2
USP46-202ENST00000451218 PI4KBQ9UBF8 816 aa7.54□□□□□ -1.2
USP46-202ENST00000451218 SYNPO2Q9UMS6 1093 aa7.54□□□□□ -1.2
USP46-202ENST00000451218 STX8Q9UNK0 236 aa7.54□□□□□ -1.2
USP46-202ENST00000451218 SLC3A2P08195 630 aaKnown RBP7.53□□□□□ -1.2
USP46-202ENST00000451218 CDC25AP30304 524 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 SLC16A2P36021 539 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 PRPHP41219 470 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 GRIPAP1Q4V328 841 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 CDKAL1Q5VV42 579 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 KCTD1Q719H9 257 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 POTEDQ86YR6 584 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 ACER1Q8TDN7 264 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 CLIP2Q9UDT6 1046 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 SCN4AP35499 1836 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 MYH11P35749 1972 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 GDF11O95390 407 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 BAG6P46379 1132 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 INF2Q27J81 1249 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 CCDC178Q5BJE1 867 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 KCNK18Q7Z418 384 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 ZNF444Q8N0Y2 327 aaPredicted RBP7.53□□□□□ -1.2
USP46-202ENST00000451218 C17orf53Q8N3J3 647 aaPredicted RBP7.53□□□□□ -1.2
USP46-202ENST00000451218 AGBL3Q8NEM8 1001 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 GJA10Q969M2 543 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 NUP88Q99567 741 aaPredicted RBP7.53□□□□□ -1.2
USP46-202ENST00000451218 LZTS2Q9BRK4 669 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 KCNMB3Q9NPA1 279 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 KCND1Q9NSA2 647 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 FRMPD4Q14CM0 1322 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 CYP3A7-CYP3A51PA0A087WV96 503 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 IKBKBO14920 756 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 NDUFB10O96000 172 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 PARP1P09874 1014 aaKnown RBP7.53□□□□□ -1.2
USP46-202ENST00000451218 SLFN14P0C7P3 912 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 CYP3A7P24462 503 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 POLD1P28340 1107 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 PMS1P54277 932 aaKnown RBP7.53□□□□□ -1.2
USP46-202ENST00000451218 POSTNQ15063 836 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 B3GNT9Q6UX72 402 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 ETNPPLQ8TBG4 499 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 PIBF1Q8WXW3 757 aa7.53□□□□□ -1.2
USP46-202ENST00000451218 MRFAP1L1Q96HT8 127 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms