RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 FBXO40Q9UH90 709 aa16.77■□□□□ 0.28
COL3A1-203ENST00000450867 ISY1Q9ULR0 285 aaKnown RBP16.77■□□□□ 0.28
COL3A1-203ENST00000450867 RIPK3Q9Y572 518 aa16.77■□□□□ 0.28
COL3A1-203ENST00000450867 CTDP1Q9Y5B0 961 aaPredicted RBP16.77■□□□□ 0.28
COL3A1-203ENST00000450867 FRMPD3Q5JV73 1810 aa16.76■□□□□ 0.27
COL3A1-203ENST00000450867 GOLGA8HP0CJ92 632 aa16.76■□□□□ 0.27
COL3A1-203ENST00000450867 FCER1AP12319 257 aa16.76■□□□□ 0.27
COL3A1-203ENST00000450867 ADORA2AP29274 412 aa16.76■□□□□ 0.27
COL3A1-203ENST00000450867 CATIPQ7Z7H3 387 aa16.76■□□□□ 0.27
COL3A1-203ENST00000450867 ZNF654Q8IZM8 581 aa16.76■□□□□ 0.27
COL3A1-203ENST00000450867 CPXCR1Q8N123 301 aa16.76■□□□□ 0.27
COL3A1-203ENST00000450867 STAG2Q8N3U4 1231 aa16.76■□□□□ 0.27
COL3A1-203ENST00000450867 MTMR8Q96EF0 704 aa16.76■□□□□ 0.27
COL3A1-203ENST00000450867 AGXT2Q9BYV1 514 aa16.76■□□□□ 0.27
COL3A1-203ENST00000450867 CWC22Q9HCG8 908 aaKnown RBP16.76■□□□□ 0.27
COL3A1-203ENST00000450867 MCM3APO60318 1980 aa16.76■□□□□ 0.27
COL3A1-203ENST00000450867 KLRF2D3W0D1 207 aa16.75■□□□□ 0.27
COL3A1-203ENST00000450867 HMGCRP04035 888 aa16.75■□□□□ 0.27
COL3A1-203ENST00000450867 PSMA5P28066 241 aa16.75■□□□□ 0.27
COL3A1-203ENST00000450867 RCAN1P53805 252 aa16.75■□□□□ 0.27
COL3A1-203ENST00000450867 ANAPC15P60006 121 aa16.75■□□□□ 0.27
COL3A1-203ENST00000450867 C8orf34Q49A92 452 aa16.75■□□□□ 0.27
COL3A1-203ENST00000450867 WDR78Q5VTH9 848 aa16.75■□□□□ 0.27
COL3A1-203ENST00000450867 ADGRF4Q8IZF3 695 aa16.75■□□□□ 0.27
COL3A1-203ENST00000450867 SH3TC2Q8TF17 1288 aa16.75■□□□□ 0.27
COL3A1-203ENST00000450867 TRIB2Q92519 343 aa16.75■□□□□ 0.27
COL3A1-203ENST00000450867 AGBL1Q96MI9 1066 aa16.75■□□□□ 0.27
COL3A1-203ENST00000450867 JAKMIP1Q96N16 626 aaKnown RBP16.75■□□□□ 0.27
COL3A1-203ENST00000450867 DNAJC25-GNG10A0A024R161 153 aa16.74■□□□□ 0.27
COL3A1-203ENST00000450867 CALM1P0DP23 149 aa16.74■□□□□ 0.27
COL3A1-203ENST00000450867 CALM2P0DP24 149 aa16.74■□□□□ 0.27
COL3A1-203ENST00000450867 CALM3P0DP25 149 aa16.74■□□□□ 0.27
COL3A1-203ENST00000450867 ELNP15502 786 aa16.74■□□□□ 0.27
COL3A1-203ENST00000450867 CYP2B6P20813 491 aa16.74■□□□□ 0.27
COL3A1-203ENST00000450867 RPS6KB1P23443 525 aa16.74■□□□□ 0.27
COL3A1-203ENST00000450867 SMARCA1P28370 1054 aa16.74■□□□□ 0.27
COL3A1-203ENST00000450867 KCTD2Q14681 263 aa16.74■□□□□ 0.27
COL3A1-203ENST00000450867 SLC35G1Q2M3R5 365 aa16.74■□□□□ 0.27
COL3A1-203ENST00000450867 MAP3K21Q5TCX8 1036 aa16.74■□□□□ 0.27
COL3A1-203ENST00000450867 OLFML2BQ68BL8 750 aa16.74■□□□□ 0.27
COL3A1-203ENST00000450867 BLOC1S2Q6QNY1 142 aa16.74■□□□□ 0.27
COL3A1-203ENST00000450867 MMP19Q99542 508 aa16.74■□□□□ 0.27
COL3A1-203ENST00000450867 LRRC2Q9BYS8 371 aa16.74■□□□□ 0.27
COL3A1-203ENST00000450867 UBA5Q9GZZ9 404 aa16.74■□□□□ 0.27
COL3A1-203ENST00000450867 MAF1Q9H063 256 aa16.74■□□□□ 0.27
COL3A1-203ENST00000450867 CPVLQ9H3G5 476 aa16.74■□□□□ 0.27
COL3A1-203ENST00000450867 RIOX1Q9H6W3 641 aa16.74■□□□□ 0.27
COL3A1-203ENST00000450867 JMJD4Q9H9V9 463 aa16.74■□□□□ 0.27
COL3A1-203ENST00000450867 ZSWIM6Q9HCJ5 1215 aa16.74■□□□□ 0.27
COL3A1-203ENST00000450867 DIS3Q9Y2L1 958 aaKnown RBP16.74■□□□□ 0.27
COL3A1-203ENST00000450867 BRCA2P51587 3418 aa16.73■□□□□ 0.27
COL3A1-203ENST00000450867 CCDC69A6NI79 296 aa16.73■□□□□ 0.27
COL3A1-203ENST00000450867 COBLO75128 1261 aa16.73■□□□□ 0.27
COL3A1-203ENST00000450867 CCDC174Q6PII3 467 aa16.73■□□□□ 0.27
COL3A1-203ENST00000450867 APOA5Q6Q788 366 aa16.73■□□□□ 0.27
COL3A1-203ENST00000450867 NPLOC4Q8TAT6 608 aa16.73■□□□□ 0.27
COL3A1-203ENST00000450867 SPZ1Q9BXG8 430 aa16.73■□□□□ 0.27
COL3A1-203ENST00000450867 ACAD9Q9H845 621 aa16.73■□□□□ 0.27
COL3A1-203ENST00000450867 RNF146Q9NTX7 359 aa16.73■□□□□ 0.27
COL3A1-203ENST00000450867 SLC5A4Q9NY91 659 aa16.73■□□□□ 0.27
COL3A1-203ENST00000450867 CCPG1Q9ULG6 757 aa16.73■□□□□ 0.27
COL3A1-203ENST00000450867 NID2Q14112 1375 aa16.73■□□□□ 0.27
COL3A1-203ENST00000450867 LRRC37A2A6NM11 1700 aa16.73■□□□□ 0.27
COL3A1-203ENST00000450867 SEC24BO95487 1268 aa16.72■□□□□ 0.27
COL3A1-203ENST00000450867 INHAP05111 366 aa16.72■□□□□ 0.27
COL3A1-203ENST00000450867 CASTP20810 708 aaKnown RBP16.72■□□□□ 0.27
COL3A1-203ENST00000450867 KIF5BP33176 963 aa16.72■□□□□ 0.27
COL3A1-203ENST00000450867 SNAP25P60880 206 aa16.72■□□□□ 0.27
COL3A1-203ENST00000450867 UBXN2AP68543 259 aa16.72■□□□□ 0.27
COL3A1-203ENST00000450867 CDC37Q16543 378 aaPredicted RBP16.72■□□□□ 0.27
COL3A1-203ENST00000450867 CCL14Q16627 93 aa16.72■□□□□ 0.27
COL3A1-203ENST00000450867 ZNF792Q3KQV3 632 aa16.72■□□□□ 0.27
COL3A1-203ENST00000450867 NFXL1Q6ZNB6 911 aa16.72■□□□□ 0.27
COL3A1-203ENST00000450867 CTCFLQ8NI51 663 aaPredicted RBP16.72■□□□□ 0.27
COL3A1-203ENST00000450867 TCEANC2Q96MN5 208 aa16.72■□□□□ 0.27
COL3A1-203ENST00000450867 TRERF1Q96PN7 1200 aa16.72■□□□□ 0.27
COL3A1-203ENST00000450867 GTF3C3Q9Y5Q9 886 aa16.72■□□□□ 0.27
COL3A1-203ENST00000450867 SLC12A7Q9Y666 1083 aa16.72■□□□□ 0.27
COL3A1-203ENST00000450867 PFASO15067 1338 aa16.71■□□□□ 0.27
COL3A1-203ENST00000450867 CYTH3O43739 400 aa16.71■□□□□ 0.27
COL3A1-203ENST00000450867 ALAS1P13196 640 aa16.71■□□□□ 0.27
COL3A1-203ENST00000450867 CPA1P15085 419 aa16.71■□□□□ 0.27
COL3A1-203ENST00000450867 EVCP57679 992 aa16.71■□□□□ 0.27
COL3A1-203ENST00000450867 QRICH1Q2TAL8 776 aa16.71■□□□□ 0.27
COL3A1-203ENST00000450867 RUFY3Q7L099 469 aa16.71■□□□□ 0.27
COL3A1-203ENST00000450867 DPP9Q86TI2 863 aa16.71■□□□□ 0.27
COL3A1-203ENST00000450867 MAML3Q96JK9 1138 aa16.71■□□□□ 0.27
COL3A1-203ENST00000450867 LZTS2Q9BRK4 669 aa16.71■□□□□ 0.27
COL3A1-203ENST00000450867 MYL10Q9BUA6 226 aa16.71■□□□□ 0.27
COL3A1-203ENST00000450867 A1CFQ9NQ94 594 aaKnown RBP16.71■□□□□ 0.27
COL3A1-203ENST00000450867 FLRT1Q9NZU1 646 aa16.71■□□□□ 0.27
COL3A1-203ENST00000450867 BRPF3Q9ULD4 1205 aa16.71■□□□□ 0.27
COL3A1-203ENST00000450867 ZBTB5O15062 677 aa16.7■□□□□ 0.26
COL3A1-203ENST00000450867 GNAQP50148 359 aa16.7■□□□□ 0.26
COL3A1-203ENST00000450867 MUM1L1Q5H9M0 696 aa16.7■□□□□ 0.26
COL3A1-203ENST00000450867 IFFO2Q5TF58 517 aa16.7■□□□□ 0.26
COL3A1-203ENST00000450867 ZNF467Q7Z7K2 595 aaPredicted RBP16.7■□□□□ 0.26
COL3A1-203ENST00000450867 MSL3Q8N5Y2 521 aaKnown RBP16.7■□□□□ 0.26
COL3A1-203ENST00000450867 FAM133AQ8N9E0 248 aa16.7■□□□□ 0.26
COL3A1-203ENST00000450867 FANCBQ8NB91 859 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms