RNA–Protein interactions for RNA: ENST00000449844.6

NPAS1-202, Transcript of neuronal PAS domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS1, Length 2,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1-202ENST00000449844 CCDC112Q8NEF3 446 aa24.68■■□□□ 1.54
NPAS1-202ENST00000449844 PCDHA6Q9UN73 950 aa24.68■■□□□ 1.54
NPAS1-202ENST00000449844 PCDHA8Q9Y5H6 950 aa24.68■■□□□ 1.54
NPAS1-202ENST00000449844 IGKV6D-41A0A0C4DH26 115 aa24.68■■□□□ 1.54
NPAS1-202ENST00000449844 PSDA5PKW4 1024 aaPredicted RBP24.68■■□□□ 1.54
NPAS1-202ENST00000449844 RBM10P98175 930 aaKnown RBP24.68■■□□□ 1.54
NPAS1-202ENST00000449844 R3HDM1Q15032 1099 aaKnown RBP24.68■■□□□ 1.54
NPAS1-202ENST00000449844 IL17AQ16552 155 aa24.68■■□□□ 1.54
NPAS1-202ENST00000449844 CEP135Q66GS9 1140 aa24.68■■□□□ 1.54
NPAS1-202ENST00000449844 CCDC12Q8WUD4 166 aaPredicted RBP24.68■■□□□ 1.54
NPAS1-202ENST00000449844 KIF2AO00139 706 aaPredicted RBP24.67■■□□□ 1.54
NPAS1-202ENST00000449844 VIL1P09327 827 aaKnown RBP24.67■■□□□ 1.54
NPAS1-202ENST00000449844 GOLGA8HP0CJ92 632 aa24.67■■□□□ 1.54
NPAS1-202ENST00000449844 CDK11BP21127 795 aaKnown RBP24.67■■□□□ 1.54
NPAS1-202ENST00000449844 PI4KBQ9UBF8 816 aa24.67■■□□□ 1.54
NPAS1-202ENST00000449844 PPP1R1BQ9UD71 204 aaPredicted RBP24.67■■□□□ 1.54
NPAS1-202ENST00000449844 HDAC9Q9UKV0 1011 aa24.67■■□□□ 1.54
NPAS1-202ENST00000449844 FER1L6Q2WGJ9 1857 aa24.67■■□□□ 1.54
NPAS1-202ENST00000449844 MYH4Q9Y623 1939 aa24.66■■□□□ 1.54
NPAS1-202ENST00000449844 DDTLA6NHG4 134 aaPredicted RBP24.66■■□□□ 1.54
NPAS1-202ENST00000449844 TXLNAP40222 546 aa24.66■■□□□ 1.54
NPAS1-202ENST00000449844 RASGRP2Q7LDG7 609 aa24.66■■□□□ 1.54
NPAS1-202ENST00000449844 MPHOSPH10O00566 681 aaKnown RBP24.66■■□□□ 1.54
NPAS1-202ENST00000449844 PDXDC2PQ6P474 469 aa24.66■■□□□ 1.54
NPAS1-202ENST00000449844 PRMT6Q96LA8 375 aaPredicted RBP24.66■■□□□ 1.54
NPAS1-202ENST00000449844 MED15Q96RN5 788 aa24.66■■□□□ 1.54
NPAS1-202ENST00000449844 TRIM34Q9BYJ4 488 aa24.66■■□□□ 1.54
NPAS1-202ENST00000449844 PDCL3Q9H2J4 239 aa24.66■■□□□ 1.54
NPAS1-202ENST00000449844 INTS13Q9NVM9 706 aa24.66■■□□□ 1.54
NPAS1-202ENST00000449844 ZNRF3Q9ULT6 936 aa24.66■■□□□ 1.54
NPAS1-202ENST00000449844 LAD1O00515 517 aa24.65■■□□□ 1.54
NPAS1-202ENST00000449844 GTPBP6O43824 516 aaPredicted RBP24.65■■□□□ 1.54
NPAS1-202ENST00000449844 TTLL1O95922 423 aa24.65■■□□□ 1.54
NPAS1-202ENST00000449844 CUL4BQ13620 913 aa24.65■■□□□ 1.54
NPAS1-202ENST00000449844 SPATA1Q5VX52 437 aa24.65■■□□□ 1.54
NPAS1-202ENST00000449844 TRMT44Q8IYL2 757 aaKnown RBP24.65■■□□□ 1.54
NPAS1-202ENST00000449844 RASGRP4Q8TDF6 673 aa24.65■■□□□ 1.54
NPAS1-202ENST00000449844 CCDC17Q96LX7 622 aa24.65■■□□□ 1.54
NPAS1-202ENST00000449844 ZMYND12Q9H0C1 365 aa24.65■■□□□ 1.54
NPAS1-202ENST00000449844 DNAJC18Q9H819 358 aa24.65■■□□□ 1.54
NPAS1-202ENST00000449844 CTIFO43310 598 aaKnown RBP24.64■■□□□ 1.54
NPAS1-202ENST00000449844 EIF6P56537 245 aaKnown RBP24.64■■□□□ 1.54
NPAS1-202ENST00000449844 E4F1Q66K89 784 aaPredicted RBP24.64■■□□□ 1.54
NPAS1-202ENST00000449844 USP17L2Q6R6M4 530 aa24.64■■□□□ 1.54
NPAS1-202ENST00000449844 SH3BP5LQ7L8J4 393 aa24.64■■□□□ 1.54
NPAS1-202ENST00000449844 LRRC47Q8N1G4 583 aaKnown RBP24.64■■□□□ 1.54
NPAS1-202ENST00000449844 RRP36Q96EU6 259 aaKnown RBP24.64■■□□□ 1.54
NPAS1-202ENST00000449844 TMOD2Q9NZR1 351 aa24.64■■□□□ 1.54
NPAS1-202ENST00000449844 TMEM232C9JQI7 657 aa24.64■■□□□ 1.53
NPAS1-202ENST00000449844 ENTPD3O75355 529 aa24.64■■□□□ 1.53
NPAS1-202ENST00000449844 CLEC10AQ8IUN9 316 aa24.64■■□□□ 1.53
NPAS1-202ENST00000449844 GMLQ99445 158 aa24.64■■□□□ 1.53
NPAS1-202ENST00000449844 TMX1Q9H3N1 280 aa24.64■■□□□ 1.53
NPAS1-202ENST00000449844 TRMT1Q9NXH9 659 aaKnown RBP24.64■■□□□ 1.53
NPAS1-202ENST00000449844 CCP110O43303 1012 aa24.63■■□□□ 1.53
NPAS1-202ENST00000449844 SLURP2P0DP57 97 aa24.63■■□□□ 1.53
NPAS1-202ENST00000449844 DTHD1Q6ZMT9 781 aa24.63■■□□□ 1.53
NPAS1-202ENST00000449844 KRT25Q7Z3Z0 450 aa24.63■■□□□ 1.53
NPAS1-202ENST00000449844 OGFOD1Q8N543 542 aa24.63■■□□□ 1.53
NPAS1-202ENST00000449844 TAOK3Q9H2K8 898 aa24.63■■□□□ 1.53
NPAS1-202ENST00000449844 FAM196BA6NMK8 535 aa24.62■■□□□ 1.53
NPAS1-202ENST00000449844 USP17L5A8MUK1 530 aa24.62■■□□□ 1.53
NPAS1-202ENST00000449844 PRPHP41219 470 aa24.62■■□□□ 1.53
NPAS1-202ENST00000449844 TBX2Q13207 712 aaPredicted RBP24.62■■□□□ 1.53
NPAS1-202ENST00000449844 PPP4R3BQ5MIZ7 849 aa24.62■■□□□ 1.53
NPAS1-202ENST00000449844 C6orf50Q9HD87 102 aa24.62■■□□□ 1.53
NPAS1-202ENST00000449844 ZBTB12Q9Y330 459 aaPredicted RBP24.62■■□□□ 1.53
NPAS1-202ENST00000449844 SYNRGQ9UMZ2 1314 aa24.62■■□□□ 1.53
NPAS1-202ENST00000449844 COL2A1P02458 1487 aaPredicted RBP24.62■■□□□ 1.53
NPAS1-202ENST00000449844 ATRNL1Q5VV63 1379 aa24.62■■□□□ 1.53
NPAS1-202ENST00000449844 SPDYE2BA6NHP3 402 aa24.62■■□□□ 1.53
NPAS1-202ENST00000449844 TUBB4AP04350 444 aa24.62■■□□□ 1.53
NPAS1-202ENST00000449844 SPDYE6P0CI01 402 aa24.62■■□□□ 1.53
NPAS1-202ENST00000449844 PDHBP11177 359 aa24.62■■□□□ 1.53
NPAS1-202ENST00000449844 GNA11P29992 359 aa24.62■■□□□ 1.53
NPAS1-202ENST00000449844 NAPAP54920 295 aa24.62■■□□□ 1.53
NPAS1-202ENST00000449844 DLGAP5Q15398 846 aa24.62■■□□□ 1.53
NPAS1-202ENST00000449844 SAMSN1Q9NSI8 373 aaKnown RBP24.62■■□□□ 1.53
NPAS1-202ENST00000449844 SEC63Q9UGP8 760 aaKnown RBP24.62■■□□□ 1.53
NPAS1-202ENST00000449844 PPP1R3GB7ZBB8 358 aa24.61■■□□□ 1.53
NPAS1-202ENST00000449844 hCG_1984214I3L0E3 225 aa24.61■■□□□ 1.53
NPAS1-202ENST00000449844 CD44P16070 742 aaKnown RBP24.61■■□□□ 1.53
NPAS1-202ENST00000449844 CASP1P29466 404 aa24.61■■□□□ 1.53
NPAS1-202ENST00000449844 INF2Q27J81 1249 aa24.61■■□□□ 1.53
NPAS1-202ENST00000449844 ZNF713Q8N859 430 aaPredicted RBP24.61■■□□□ 1.53
NPAS1-202ENST00000449844 CERKLQ49MI3 558 aaPredicted RBP24.61■■□□□ 1.53
NPAS1-202ENST00000449844 ASPRV1Q53RT3 343 aa24.61■■□□□ 1.53
NPAS1-202ENST00000449844 SPECC1LQ69YQ0 1117 aa24.61■■□□□ 1.53
NPAS1-202ENST00000449844 CPVLQ9H3G5 476 aa24.61■■□□□ 1.53
NPAS1-202ENST00000449844 RMND1Q9NWS8 449 aa24.61■■□□□ 1.53
NPAS1-202ENST00000449844 A0A1B0GTH6 734 aa24.6■■□□□ 1.53
NPAS1-202ENST00000449844 FCHSD1Q86WN1 690 aa24.6■■□□□ 1.53
NPAS1-202ENST00000449844 AGBL3Q8NEM8 1001 aa24.6■■□□□ 1.53
NPAS1-202ENST00000449844 PPP1R13BQ96KQ4 1090 aa24.6■■□□□ 1.53
NPAS1-202ENST00000449844 RIOX1Q9H6W3 641 aa24.6■■□□□ 1.53
NPAS1-202ENST00000449844 FRMPD2Q68DX3 1309 aaPredicted RBP24.6■■□□□ 1.53
NPAS1-202ENST00000449844 ESYT2A0FGR8 921 aa24.59■■□□□ 1.53
NPAS1-202ENST00000449844 ATP2B2Q01814 1243 aa24.59■■□□□ 1.53
NPAS1-202ENST00000449844 NR1I3Q14994 352 aa24.59■■□□□ 1.53
NPAS1-202ENST00000449844 HSP90AA4PQ58FG1 418 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms