RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 GABPAQ06546 454 aa15.3■□□□□ 0.04
AC004540.1-204ENST00000449537 FSCN1Q16658 493 aaKnown RBP15.3■□□□□ 0.04
AC004540.1-204ENST00000449537 TTC39AQ5SRH9 613 aa15.3■□□□□ 0.04
AC004540.1-204ENST00000449537 SIAH1Q8IUQ4 282 aa15.3■□□□□ 0.04
AC004540.1-204ENST00000449537 CFAP54Q96N23 3096 aa15.3■□□□□ 0.04
AC004540.1-204ENST00000449537 FTOQ9C0B1 505 aaKnown RBP eCLIP15.3■□□□□ 0.04
AC004540.1-204ENST00000449537 SUGCTQ9HAC7 445 aa15.3■□□□□ 0.04
AC004540.1-204ENST00000449537 FBXO28Q9NVF7 368 aa15.3■□□□□ 0.04
AC004540.1-204ENST00000449537 PRKAG3Q9UGI9 489 aa15.3■□□□□ 0.04
AC004540.1-204ENST00000449537 FAM50BQ9Y247 325 aa15.3■□□□□ 0.04
AC004540.1-204ENST00000449537 COL11A1P12107 1806 aaPredicted RBP15.29■□□□□ 0.04
AC004540.1-204ENST00000449537 SRGAP3O43295 1099 aa15.29■□□□□ 0.04
AC004540.1-204ENST00000449537 RFC2P35250 354 aa15.29■□□□□ 0.04
AC004540.1-204ENST00000449537 CCDC184Q52MB2 194 aa15.29■□□□□ 0.04
AC004540.1-204ENST00000449537 CCDC158Q5M9N0 1113 aa15.29■□□□□ 0.04
AC004540.1-204ENST00000449537 IER5LQ5T953 404 aa15.29■□□□□ 0.04
AC004540.1-204ENST00000449537 MAGEB6Q8N7X4 407 aa15.29■□□□□ 0.04
AC004540.1-204ENST00000449537 AP5M1Q9H0R1 490 aa15.29■□□□□ 0.04
AC004540.1-204ENST00000449537 ALDH8A1Q9H2A2 487 aaPredicted RBP15.29■□□□□ 0.04
AC004540.1-204ENST00000449537 PPP1R9AQ9ULJ8 1098 aa15.29■□□□□ 0.04
AC004540.1-204ENST00000449537 C19orf67A6NJJ6 358 aa15.28■□□□□ 0.04
AC004540.1-204ENST00000449537 CYP2C9P11712 490 aa15.28■□□□□ 0.04
AC004540.1-204ENST00000449537 PSMC6P62333 389 aa15.28■□□□□ 0.04
AC004540.1-204ENST00000449537 ZP2Q05996 745 aa15.28■□□□□ 0.04
AC004540.1-204ENST00000449537 ARMCX2Q7L311 632 aa15.28■□□□□ 0.04
AC004540.1-204ENST00000449537 REPS2Q8NFH8 660 aa15.28■□□□□ 0.04
AC004540.1-204ENST00000449537 NEK9Q8TD19 979 aa15.28■□□□□ 0.04
AC004540.1-204ENST00000449537 SSH1Q8WYL5 1049 aa15.28■□□□□ 0.04
AC004540.1-204ENST00000449537 ZBED2Q9BTP6 218 aa15.28■□□□□ 0.04
AC004540.1-204ENST00000449537 TEX13BQ9BXU2 312 aa15.28■□□□□ 0.04
AC004540.1-204ENST00000449537 PIH1D3Q9NQM4 214 aaKnown RBP15.28■□□□□ 0.04
AC004540.1-204ENST00000449537 MTUS1Q9ULD2 1270 aa15.28■□□□□ 0.04
AC004540.1-204ENST00000449537 SPTBN4Q9H254 2564 aa15.28■□□□□ 0.04
AC004540.1-204ENST00000449537 ASTN1O14525 1302 aa15.27■□□□□ 0.04
AC004540.1-204ENST00000449537 ZFHX2Q9C0A1 2572 aaPredicted RBP15.27■□□□□ 0.04
AC004540.1-204ENST00000449537 LCHNA4D1U4 455 aa15.27■□□□□ 0.04
AC004540.1-204ENST00000449537 H3BQ06 376 aaPredicted RBP15.27■□□□□ 0.04
AC004540.1-204ENST00000449537 DYNC1LI2O43237 492 aaPredicted RBP15.27■□□□□ 0.04
AC004540.1-204ENST00000449537 ANP32CO43423 234 aa15.27■□□□□ 0.04
AC004540.1-204ENST00000449537 KCNJ6P48051 423 aa15.27■□□□□ 0.04
AC004540.1-204ENST00000449537 SLC4A3P48751 1232 aa15.27■□□□□ 0.04
AC004540.1-204ENST00000449537 ICA1Q05084 483 aa15.27■□□□□ 0.04
AC004540.1-204ENST00000449537 PKN1Q16512 942 aa15.27■□□□□ 0.04
AC004540.1-204ENST00000449537 SNRNP48Q6IEG0 339 aaKnown RBP15.27■□□□□ 0.04
AC004540.1-204ENST00000449537 ERMP1Q7Z2K6 904 aa15.27■□□□□ 0.04
AC004540.1-204ENST00000449537 BMP8AQ7Z5Y6 402 aa15.27■□□□□ 0.04
AC004540.1-204ENST00000449537 ADHFE1Q8IWW8 467 aa15.27■□□□□ 0.04
AC004540.1-204ENST00000449537 TGS1Q96RS0 853 aaKnown RBP15.27■□□□□ 0.04
AC004540.1-204ENST00000449537 TRMT13Q9NUP7 481 aaKnown RBP15.27■□□□□ 0.04
AC004540.1-204ENST00000449537 RIPK3Q9Y572 518 aa15.27■□□□□ 0.04
AC004540.1-204ENST00000449537 USP34Q70CQ2 3546 aa15.26■□□□□ 0.03
AC004540.1-204ENST00000449537 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.26■□□□□ 0.03
AC004540.1-204ENST00000449537 IDH1O75874 414 aaKnown RBP15.26■□□□□ 0.03
AC004540.1-204ENST00000449537 BAIAP3O94812 1187 aa15.26■□□□□ 0.03
AC004540.1-204ENST00000449537 ZAP70P43403 619 aa15.26■□□□□ 0.03
AC004540.1-204ENST00000449537 ERVK-21P61565 698 aa15.26■□□□□ 0.03
AC004540.1-204ENST00000449537 TCF15Q12870 199 aa15.26■□□□□ 0.03
AC004540.1-204ENST00000449537 G3BP1Q13283 466 aaKnown RBP eCLIP15.26■□□□□ 0.03
AC004540.1-204ENST00000449537 DIEXFQ68CQ4 756 aaKnown RBP15.26■□□□□ 0.03
AC004540.1-204ENST00000449537 TLK2Q86UE8 772 aa15.26■□□□□ 0.03
AC004540.1-204ENST00000449537 CLEC10AQ8IUN9 316 aa15.26■□□□□ 0.03
AC004540.1-204ENST00000449537 CCDC144CPQ8IYA2 1237 aa15.26■□□□□ 0.03
AC004540.1-204ENST00000449537 ANKRD35Q8N283 1001 aa15.26■□□□□ 0.03
AC004540.1-204ENST00000449537 RETREG2Q8NC44 543 aa15.26■□□□□ 0.03
AC004540.1-204ENST00000449537 GNEQ9Y223 722 aaKnown RBP15.26■□□□□ 0.03
AC004540.1-204ENST00000449537 SCN5AQ14524 2016 aa15.26■□□□□ 0.03
AC004540.1-204ENST00000449537 MCM3APO60318 1980 aa15.25■□□□□ 0.03
AC004540.1-204ENST00000449537 TNKSO95271 1327 aa15.25■□□□□ 0.03
AC004540.1-204ENST00000449537 PARP14Q460N5 1801 aa15.25■□□□□ 0.03
AC004540.1-204ENST00000449537 IQCF3P0C7M6 154 aa15.25■□□□□ 0.03
AC004540.1-204ENST00000449537 IRS1P35568 1242 aa15.25■□□□□ 0.03
AC004540.1-204ENST00000449537 PBXIP1Q96AQ6 731 aa15.25■□□□□ 0.03
AC004540.1-204ENST00000449537 KATNBL1Q9H079 304 aa15.25■□□□□ 0.03
AC004540.1-204ENST00000449537 COL4A4P53420 1690 aaPredicted RBP15.25■□□□□ 0.03
AC004540.1-204ENST00000449537 MYO5AQ9Y4I1 1855 aaKnown RBP15.25■□□□□ 0.03
AC004540.1-204ENST00000449537 RAD21O60216 631 aa15.24■□□□□ 0.03
AC004540.1-204ENST00000449537 HERC4Q5GLZ8 1057 aaPredicted RBP15.24■□□□□ 0.03
AC004540.1-204ENST00000449537 EP400NLQ6ZTU2 488 aa15.24■□□□□ 0.03
AC004540.1-204ENST00000449537 EDAQ92838 391 aa15.24■□□□□ 0.03
AC004540.1-204ENST00000449537 FGD4Q96M96 766 aa15.24■□□□□ 0.03
AC004540.1-204ENST00000449537 IRF2BPLQ9H1B7 796 aa15.24■□□□□ 0.03
AC004540.1-204ENST00000449537 MCM9Q9NXL9 1143 aa15.24■□□□□ 0.03
AC004540.1-204ENST00000449537 CTNNA3Q9UI47 895 aa15.24■□□□□ 0.03
AC004540.1-204ENST00000449537 MUTYHQ9UIF7 546 aa15.24■□□□□ 0.03
AC004540.1-204ENST00000449537 AKR1B1P15121 316 aa15.23■□□□□ 0.03
AC004540.1-204ENST00000449537 FAM83BQ5T0W9 1011 aa15.23■□□□□ 0.03
AC004540.1-204ENST00000449537 SUGP1Q8IWZ8 645 aaKnown RBP15.23■□□□□ 0.03
AC004540.1-204ENST00000449537 CPXCR1Q8N123 301 aa15.23■□□□□ 0.03
AC004540.1-204ENST00000449537 ZNF512BQ96KM6 892 aaPredicted RBP15.23■□□□□ 0.03
AC004540.1-204ENST00000449537 RAD9AQ99638 391 aa15.23■□□□□ 0.03
AC004540.1-204ENST00000449537 MEIS3Q99687 375 aa15.23■□□□□ 0.03
AC004540.1-204ENST00000449537 DBNDD2Q9BQY9 259 aa15.23■□□□□ 0.03
AC004540.1-204ENST00000449537 GOPCQ9HD26 462 aa15.23■□□□□ 0.03
AC004540.1-204ENST00000449537 FAM86C1Q9NVL1 165 aa15.23■□□□□ 0.03
AC004540.1-204ENST00000449537 SWAP70Q9UH65 585 aa15.23■□□□□ 0.03
AC004540.1-204ENST00000449537 Q9Y3F1 56 aa15.23■□□□□ 0.03
AC004540.1-204ENST00000449537 CTDP1Q9Y5B0 961 aaPredicted RBP15.23■□□□□ 0.03
AC004540.1-204ENST00000449537 TECTAO75443 2155 aa15.23■□□□□ 0.03
AC004540.1-204ENST00000449537 PITPNM1O00562 1244 aa15.22■□□□□ 0.03
AC004540.1-204ENST00000449537 EEF2P13639 858 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms