RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 CASC4Q6P4E1 433 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 U2AF1L4Q8WU68 220 aaKnown RBP11.23□□□□□ -0.61
SCN10A-201ENST00000449082 JPH2Q9BR39 696 aaPredicted RBP11.23□□□□□ -0.61
SCN10A-201ENST00000449082 IFIH1Q9BYX4 1025 aaKnown RBP11.23□□□□□ -0.61
SCN10A-201ENST00000449082 TRIM31Q9BZY9 425 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 DHX36Q9H2U1 1008 aaKnown RBP11.23□□□□□ -0.61
SCN10A-201ENST00000449082 KANSL2Q9H9L4 492 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 HESX1Q9UBX0 185 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 TPCN1Q9ULQ1 816 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 ERBB3P21860 1342 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 LRRIQ4A6NIV6 560 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 VIMP08670 466 aaKnown RBP11.23□□□□□ -0.61
SCN10A-201ENST00000449082 RSPH3Q86UC2 560 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 TRIML1Q8N9V2 468 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 ZFP91Q96JP5 570 aaPredicted RBP11.23□□□□□ -0.61
SCN10A-201ENST00000449082 SLF1Q9BQI6 1058 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 KIAA1468Q9P260 1216 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 TTLL3Q9Y4R7 772 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 HEG1Q9ULI3 1381 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 LAD1O00515 517 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 BRD1O95696 1058 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 DALRD3Q5D0E6 543 aaKnown RBP11.23□□□□□ -0.61
SCN10A-201ENST00000449082 AP5M1Q9H0R1 490 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 SEC31BQ9NQW1 1179 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 RABGAP1Q9Y3P9 1069 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 NPR1P16066 1061 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 CMA1P23946 247 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 IGBP1P78318 339 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 KRT81Q14533 505 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 PPP2R5AQ15172 486 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 HADHQ16836 314 aaKnown RBP11.23□□□□□ -0.61
SCN10A-201ENST00000449082 NLRP10Q86W26 655 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 MAGEF1Q9HAY2 307 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.23□□□□□ -0.61
SCN10A-201ENST00000449082 MNAT1P51948 309 aa11.22□□□□□ -0.61
SCN10A-201ENST00000449082 ATP6V0A1Q93050 837 aa11.22□□□□□ -0.61
SCN10A-201ENST00000449082 DBNLQ9UJU6 430 aaKnown RBP11.22□□□□□ -0.61
SCN10A-201ENST00000449082 ABCA8O94911 1581 aa11.22□□□□□ -0.61
SCN10A-201ENST00000449082 XPOTO43592 962 aaKnown RBP11.22□□□□□ -0.61
SCN10A-201ENST00000449082 STAM2O75886 525 aa11.22□□□□□ -0.61
SCN10A-201ENST00000449082 PDIA3P30101 505 aaKnown RBP11.22□□□□□ -0.61
SCN10A-201ENST00000449082 HSPA1LP34931 641 aa11.22□□□□□ -0.61
SCN10A-201ENST00000449082 KLHL7Q8IXQ5 586 aa11.22□□□□□ -0.61
SCN10A-201ENST00000449082 SEPT12Q8IYM1 358 aa11.22□□□□□ -0.61
SCN10A-201ENST00000449082 RTKN2Q8IZC4 609 aa11.22□□□□□ -0.61
SCN10A-201ENST00000449082 LRCH2Q5VUJ6 765 aa11.22□□□□□ -0.61
SCN10A-201ENST00000449082 TRIM50Q86XT4 487 aa11.22□□□□□ -0.61
SCN10A-201ENST00000449082 STAP2Q9UGK3 403 aa11.22□□□□□ -0.61
SCN10A-201ENST00000449082 MKRN1Q9UHC7 482 aaKnown RBP11.22□□□□□ -0.61
SCN10A-201ENST00000449082 SYNMO15061 1565 aa11.22□□□□□ -0.61
SCN10A-201ENST00000449082 BTBD18B2RXH4 712 aa11.22□□□□□ -0.61
SCN10A-201ENST00000449082 PDE6CP51160 858 aa11.22□□□□□ -0.61
SCN10A-201ENST00000449082 ZNF445P59923 1031 aa11.22□□□□□ -0.61
SCN10A-201ENST00000449082 AOC3Q16853 763 aa11.22□□□□□ -0.61
SCN10A-201ENST00000449082 LONRF3Q496Y0 759 aa11.22□□□□□ -0.61
SCN10A-201ENST00000449082 RPS6KC1Q96S38 1066 aa11.22□□□□□ -0.61
SCN10A-201ENST00000449082 RAB20Q9NX57 234 aa11.22□□□□□ -0.61
SCN10A-201ENST00000449082 PARP2Q9UGN5 583 aa11.22□□□□□ -0.61
SCN10A-201ENST00000449082 HECW2Q9P2P5 1572 aa11.22□□□□□ -0.61
SCN10A-201ENST00000449082 ERVK-7P63135 1459 aa11.22□□□□□ -0.61
SCN10A-201ENST00000449082 SPICE1Q8N0Z3 855 aa11.22□□□□□ -0.61
SCN10A-201ENST00000449082 USP28Q96RU2 1077 aa11.22□□□□□ -0.61
SCN10A-201ENST00000449082 hCG_1984214I3L0E3 225 aa11.21□□□□□ -0.61
SCN10A-201ENST00000449082 CIB2O75838 187 aa11.21□□□□□ -0.61
SCN10A-201ENST00000449082 PAK2Q13177 524 aa11.21□□□□□ -0.61
SCN10A-201ENST00000449082 FAM182BQ5T319 152 aa11.21□□□□□ -0.61
SCN10A-201ENST00000449082 RUFY4Q6ZNE9 571 aa11.21□□□□□ -0.61
SCN10A-201ENST00000449082 PDZD4Q76G19 769 aaPredicted RBP11.21□□□□□ -0.61
SCN10A-201ENST00000449082 EXOC8Q8IYI6 725 aa11.21□□□□□ -0.61
SCN10A-201ENST00000449082 ZNF713Q8N859 430 aaPredicted RBP11.21□□□□□ -0.61
SCN10A-201ENST00000449082 RSAD2Q8WXG1 361 aa11.21□□□□□ -0.61
SCN10A-201ENST00000449082 TIGD1Q96MW7 591 aa11.21□□□□□ -0.61
SCN10A-201ENST00000449082 SERPINB13Q9UIV8 391 aa11.21□□□□□ -0.61
SCN10A-201ENST00000449082 PCDHA4Q9UN74 947 aa11.21□□□□□ -0.61
SCN10A-201ENST00000449082 HPDP32754 393 aaPredicted RBP11.21□□□□□ -0.61
SCN10A-201ENST00000449082 ADD2P35612 726 aa11.21□□□□□ -0.61
SCN10A-201ENST00000449082 SARNPP82979 210 aaKnown RBP11.21□□□□□ -0.61
SCN10A-201ENST00000449082 PTGDRQ13258 359 aa11.21□□□□□ -0.61
SCN10A-201ENST00000449082 GPIHBP1Q8IV16 184 aa11.21□□□□□ -0.61
SCN10A-201ENST00000449082 ZNF577Q9BSK1 485 aa11.21□□□□□ -0.61
SCN10A-201ENST00000449082 ZNF277Q9NRM2 450 aaPredicted RBP11.21□□□□□ -0.61
SCN10A-201ENST00000449082 SEPT9Q9UHD8 586 aaPredicted RBP11.21□□□□□ -0.61
SCN10A-201ENST00000449082 MBD5Q9P267 1494 aa11.21□□□□□ -0.61
SCN10A-201ENST00000449082 TLR3O15455 904 aaKnown RBP11.21□□□□□ -0.61
SCN10A-201ENST00000449082 DTNBO60941 627 aa11.21□□□□□ -0.61
SCN10A-201ENST00000449082 ABL1P00519 1130 aa11.21□□□□□ -0.61
SCN10A-201ENST00000449082 OATP04181 439 aa11.21□□□□□ -0.61
SCN10A-201ENST00000449082 RPN1P04843 607 aaKnown RBP11.21□□□□□ -0.61
SCN10A-201ENST00000449082 TRAPPC10P48553 1259 aa11.21□□□□□ -0.61
SCN10A-201ENST00000449082 GRAPQ13588 217 aa11.21□□□□□ -0.61
SCN10A-201ENST00000449082 FAM26FQ5R3K3 315 aa11.21□□□□□ -0.61
SCN10A-201ENST00000449082 MIS18BP1Q6P0N0 1132 aa11.21□□□□□ -0.61
SCN10A-201ENST00000449082 RETREG2Q8NC44 543 aa11.21□□□□□ -0.61
SCN10A-201ENST00000449082 OR8K1Q8NGG5 319 aa11.21□□□□□ -0.61
SCN10A-201ENST00000449082 GRAPLQ8TC17 118 aaPredicted RBP11.21□□□□□ -0.61
SCN10A-201ENST00000449082 RNF26Q9BY78 433 aaPredicted RBP11.21□□□□□ -0.61
SCN10A-201ENST00000449082 DLATP10515 647 aaKnown RBP11.21□□□□□ -0.62
SCN10A-201ENST00000449082 SLC12A2P55011 1212 aa11.21□□□□□ -0.62
SCN10A-201ENST00000449082 DYNLL1P63167 89 aaKnown RBP11.21□□□□□ -0.62
SCN10A-201ENST00000449082 LONRF2Q1L5Z9 754 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms