RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 ZMYND12Q9H0C1 365 aa12.07□□□□□ -0.48
VIPAS39-203ENST00000448935 KCNH3Q9ULD8 1083 aa12.07□□□□□ -0.48
VIPAS39-203ENST00000448935 SYNPO2Q9UMS6 1093 aa12.07□□□□□ -0.48
VIPAS39-203ENST00000448935 PCDHAC2Q9Y5I4 1007 aa12.07□□□□□ -0.48
VIPAS39-203ENST00000448935 ZNF165P49910 485 aa12.06□□□□□ -0.48
VIPAS39-203ENST00000448935 ABCB5Q2M3G0 1257 aa12.06□□□□□ -0.48
VIPAS39-203ENST00000448935 CIAPIN1Q6FI81 312 aa12.06□□□□□ -0.48
VIPAS39-203ENST00000448935 PPP1R18Q6NYC8 613 aa12.06□□□□□ -0.48
VIPAS39-203ENST00000448935 SH3BP5LQ7L8J4 393 aa12.06□□□□□ -0.48
VIPAS39-203ENST00000448935 KRT25Q7Z3Z0 450 aa12.06□□□□□ -0.48
VIPAS39-203ENST00000448935 LRRC47Q8N1G4 583 aaKnown RBP12.06□□□□□ -0.48
VIPAS39-203ENST00000448935 DCAF4Q8WV16 495 aa12.06□□□□□ -0.48
VIPAS39-203ENST00000448935 GPKOWQ92917 476 aaPredicted RBP eCLIP12.06□□□□□ -0.48
VIPAS39-203ENST00000448935 DNAJC18Q9H819 358 aa12.06□□□□□ -0.48
VIPAS39-203ENST00000448935 BMP2KQ9NSY1 1161 aaPredicted RBP12.06□□□□□ -0.48
VIPAS39-203ENST00000448935 KIAA1468Q9P260 1216 aa12.06□□□□□ -0.48
VIPAS39-203ENST00000448935 ZNF70Q9UC06 446 aaPredicted RBP12.06□□□□□ -0.48
VIPAS39-203ENST00000448935 LTBP3Q9NS15 1303 aa12.06□□□□□ -0.48
VIPAS39-203ENST00000448935 RPS12P25398 132 aaKnown RBP12.05□□□□□ -0.48
VIPAS39-203ENST00000448935 ATP2C1P98194 919 aaPredicted RBP12.05□□□□□ -0.48
VIPAS39-203ENST00000448935 ARL6IP4Q66PJ3 421 aaKnown RBP12.05□□□□□ -0.48
VIPAS39-203ENST00000448935 HOMER1Q86YM7 354 aa12.05□□□□□ -0.48
VIPAS39-203ENST00000448935 CEP57L1Q8IYX8 460 aa12.05□□□□□ -0.48
VIPAS39-203ENST00000448935 CLIC6Q96NY7 704 aa12.05□□□□□ -0.48
VIPAS39-203ENST00000448935 CSRNP1Q96S65 589 aa12.05□□□□□ -0.48
VIPAS39-203ENST00000448935 COL4A5P29400 1685 aa12.05□□□□□ -0.48
VIPAS39-203ENST00000448935 C2orf72A6NCS6 295 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 M0R2N6 131 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 LAD1O00515 517 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 EIF6P56537 245 aaKnown RBP12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 ATP2B2Q01814 1243 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 ICA1Q05084 483 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 CXCL9Q07325 125 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 ORC2Q13416 577 aaPredicted RBP12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 R3HDM1Q15032 1099 aaKnown RBP12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 CCDC96Q2M329 555 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 SLC35G1Q2M3R5 365 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 EARS2Q5JPH6 523 aaKnown RBP12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 FAM83AQ86UY5 434 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 CNNM3Q8NE01 707 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 GLT8D2Q9H1C3 349 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 CBX8Q9HC52 389 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 USP25Q9UHP3 1055 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 PCDHA6Q9UN73 950 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 PCDHA8Q9Y5H6 950 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 FRMPD2Q68DX3 1309 aaPredicted RBP12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 ARFGEF1Q9Y6D6 1849 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 PNMA6FA0A0J9YX94 578 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 FAM205CA6NFA0 338 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 SMCO2A6NFE2 343 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 GOLGA6L19H0YKK7 550 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 EEF2P13639 858 aaKnown RBP12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 FECHP22830 423 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 TNNI2P48788 182 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 NONOQ15233 471 aaKnown RBP eCLIP12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 ZNF174Q15697 407 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 KRBA2Q6ZNG9 492 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 PIGSQ96S52 555 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 UBA5Q9GZZ9 404 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 DNAJC25Q9H1X3 360 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 VAT1LQ9HCJ6 419 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 PPP1R1BQ9UD71 204 aaPredicted RBP12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 CCDC39Q9UFE4 941 aa12.04□□□□□ -0.48
VIPAS39-203ENST00000448935 BECN2A8MW95 431 aa12.03□□□□□ -0.48
VIPAS39-203ENST00000448935 TCP10L2B9ZVM9 353 aa12.03□□□□□ -0.48
VIPAS39-203ENST00000448935 KIF3CO14782 793 aa12.03□□□□□ -0.48
VIPAS39-203ENST00000448935 TBC1D12O60347 775 aa12.03□□□□□ -0.48
VIPAS39-203ENST00000448935 VEGFAP15692 232 aaPredicted RBP12.03□□□□□ -0.48
VIPAS39-203ENST00000448935 NLRP12P59046 1061 aa12.03□□□□□ -0.48
VIPAS39-203ENST00000448935 PTGDRQ13258 359 aa12.03□□□□□ -0.48
VIPAS39-203ENST00000448935 TYW1BQ6NUM6 668 aa12.03□□□□□ -0.48
VIPAS39-203ENST00000448935 FAM43AQ8N2R8 423 aa12.03□□□□□ -0.48
VIPAS39-203ENST00000448935 PDCD7Q8N8D1 485 aaKnown RBP12.03□□□□□ -0.48
VIPAS39-203ENST00000448935 GMCL1P1Q8NEA9 526 aa12.03□□□□□ -0.48
VIPAS39-203ENST00000448935 CSRNP2Q9H175 543 aa12.03□□□□□ -0.48
VIPAS39-203ENST00000448935 GPCPD1Q9NPB8 672 aa12.03□□□□□ -0.48
VIPAS39-203ENST00000448935 CLRN2A0PK11 232 aa12.02□□□□□ -0.49
VIPAS39-203ENST00000448935 PSDA5PKW4 1024 aaPredicted RBP12.02□□□□□ -0.49
VIPAS39-203ENST00000448935 LONP1P36776 959 aaKnown RBP12.02□□□□□ -0.49
VIPAS39-203ENST00000448935 TXLNAP40222 546 aa12.02□□□□□ -0.49
VIPAS39-203ENST00000448935 SLC1A4P43007 532 aa12.02□□□□□ -0.49
VIPAS39-203ENST00000448935 ADCY7P51828 1080 aa12.02□□□□□ -0.49
VIPAS39-203ENST00000448935 TNFAIP1Q13829 316 aa12.02□□□□□ -0.49
VIPAS39-203ENST00000448935 SEPT2Q15019 361 aa12.02□□□□□ -0.49
VIPAS39-203ENST00000448935 SLFN13Q68D06 897 aa12.02□□□□□ -0.49
VIPAS39-203ENST00000448935 ADGRF4Q8IZF3 695 aa12.02□□□□□ -0.49
VIPAS39-203ENST00000448935 REXO1Q8N1G1 1221 aaKnown RBP12.02□□□□□ -0.49
VIPAS39-203ENST00000448935 GMCL1Q96IK5 515 aa12.02□□□□□ -0.49
VIPAS39-203ENST00000448935 BPIFA3Q9BQP9 254 aa12.02□□□□□ -0.49
VIPAS39-203ENST00000448935 ARHGEF10LQ9HCE6 1279 aa12.02□□□□□ -0.49
VIPAS39-203ENST00000448935 TUBE1Q9UJT0 475 aa12.02□□□□□ -0.49
VIPAS39-203ENST00000448935 BCS1LQ9Y276 419 aa12.02□□□□□ -0.49
VIPAS39-203ENST00000448935 FAM196BA6NMK8 535 aa12.01□□□□□ -0.49
VIPAS39-203ENST00000448935 NFKBIEO00221 500 aa12.01□□□□□ -0.49
VIPAS39-203ENST00000448935 ZBTB5O15062 677 aa12.01□□□□□ -0.49
VIPAS39-203ENST00000448935 POLR2DO15514 142 aaKnown RBP12.01□□□□□ -0.49
VIPAS39-203ENST00000448935 ADCY5O95622 1261 aa12.01□□□□□ -0.49
VIPAS39-203ENST00000448935 PTMAP06454 111 aaKnown RBP12.01□□□□□ -0.49
VIPAS39-203ENST00000448935 MCM7P33993 719 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms