RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 IQCA1LA6NCM1 817 aa7.96□□□□□ -1.14
USP49-205ENST00000448078 CCDC85CA6NKD9 419 aa7.96□□□□□ -1.14
USP49-205ENST00000448078 ERVV-2B6SEH9 535 aa7.96□□□□□ -1.14
USP49-205ENST00000448078 H0YIN7 160 aa7.96□□□□□ -1.14
USP49-205ENST00000448078 PPM1GO15355 546 aaPredicted RBP7.96□□□□□ -1.14
USP49-205ENST00000448078 GYS1P13807 737 aa7.96□□□□□ -1.14
USP49-205ENST00000448078 KCNA3P22001 575 aa7.96□□□□□ -1.14
USP49-205ENST00000448078 TRIM26Q12899 539 aaPredicted RBP7.96□□□□□ -1.14
USP49-205ENST00000448078 RRS1Q15050 365 aaKnown RBP7.96□□□□□ -1.14
USP49-205ENST00000448078 DUSP27Q5VZP5 1158 aa7.96□□□□□ -1.14
USP49-205ENST00000448078 PDZD3Q86UT5 571 aa7.96□□□□□ -1.14
USP49-205ENST00000448078 SMYD4Q8IYR2 804 aaPredicted RBP7.96□□□□□ -1.14
USP49-205ENST00000448078 CRELD1Q96HD1 420 aa7.96□□□□□ -1.14
USP49-205ENST00000448078 SEMA6CQ9H3T2 930 aa7.96□□□□□ -1.14
USP49-205ENST00000448078 PCMTD2Q9NV79 361 aa7.96□□□□□ -1.14
USP49-205ENST00000448078 CRIM1Q9NZV1 1036 aa7.96□□□□□ -1.14
USP49-205ENST00000448078 LEMD3Q9Y2U8 911 aa7.96□□□□□ -1.14
USP49-205ENST00000448078 LY75O60449 1722 aa7.95□□□□□ -1.14
USP49-205ENST00000448078 KCPQ6ZWJ8 1503 aa7.95□□□□□ -1.14
USP49-205ENST00000448078 FOXN1O15353 648 aa7.95□□□□□ -1.14
USP49-205ENST00000448078 RLBP1P12271 317 aa7.95□□□□□ -1.14
USP49-205ENST00000448078 BMP6P22004 513 aa7.95□□□□□ -1.14
USP49-205ENST00000448078 ITGB7P26010 798 aa7.95□□□□□ -1.14
USP49-205ENST00000448078 ITPK1Q13572 414 aa7.95□□□□□ -1.14
USP49-205ENST00000448078 HSP90AB2PQ58FF8 381 aa7.95□□□□□ -1.14
USP49-205ENST00000448078 NBPF11Q86T75 865 aa7.95□□□□□ -1.14
USP49-205ENST00000448078 AMIGO3Q86WK7 504 aa7.95□□□□□ -1.14
USP49-205ENST00000448078 C12orf40Q86WS4 652 aa7.95□□□□□ -1.14
USP49-205ENST00000448078 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.95□□□□□ -1.14
USP49-205ENST00000448078 ABHD8Q96I13 439 aa7.95□□□□□ -1.14
USP49-205ENST00000448078 MIR1-1HGQ9H1L0 117 aa7.95□□□□□ -1.14
USP49-205ENST00000448078 LRRC4CQ9HCJ2 640 aa7.95□□□□□ -1.14
USP49-205ENST00000448078 TGFB1P01137 390 aa7.94□□□□□ -1.14
USP49-205ENST00000448078 FBLN1P23142 703 aa7.94□□□□□ -1.14
USP49-205ENST00000448078 CHRNA5P30532 468 aa7.94□□□□□ -1.14
USP49-205ENST00000448078 LBX1P52954 281 aa7.94□□□□□ -1.14
USP49-205ENST00000448078 ZNF252P-AS1Q0IIN9 211 aa7.94□□□□□ -1.14
USP49-205ENST00000448078 HDXQ7Z353 690 aa7.94□□□□□ -1.14
USP49-205ENST00000448078 NPM2Q86SE8 214 aaKnown RBP7.94□□□□□ -1.14
USP49-205ENST00000448078 JARID2Q92833 1246 aaPredicted RBP7.94□□□□□ -1.14
USP49-205ENST00000448078 METTL22Q9BUU2 404 aaPredicted RBP7.94□□□□□ -1.14
USP49-205ENST00000448078 ACSS3Q9H6R3 686 aa7.94□□□□□ -1.14
USP49-205ENST00000448078 RNF112Q9ULX5 631 aa7.94□□□□□ -1.14
USP49-205ENST00000448078 INSRP06213 1382 aa7.94□□□□□ -1.14
USP49-205ENST00000448078 KIF24Q5T7B8 1368 aa7.94□□□□□ -1.14
USP49-205ENST00000448078 MEGF6O75095 1541 aa7.93□□□□□ -1.14
USP49-205ENST00000448078 F6X3S4 739 aa7.93□□□□□ -1.14
USP49-205ENST00000448078 FYB1O15117 783 aa7.93□□□□□ -1.14
USP49-205ENST00000448078 NPHP1O15259 732 aa7.93□□□□□ -1.14
USP49-205ENST00000448078 LIG3P49916 1009 aa7.93□□□□□ -1.14
USP49-205ENST00000448078 DEFB115Q30KQ5 88 aa7.93□□□□□ -1.14
USP49-205ENST00000448078 PLEKHO1Q53GL0 409 aaPredicted RBP7.93□□□□□ -1.14
USP49-205ENST00000448078 PPM1JQ5JR12 505 aa7.93□□□□□ -1.14
USP49-205ENST00000448078 RELL1Q8IUW5 271 aa7.93□□□□□ -1.14
USP49-205ENST00000448078 DISC1Q9NRI5 854 aa7.93□□□□□ -1.14
USP49-205ENST00000448078 PRKAG2Q9UGJ0 569 aa7.93□□□□□ -1.14
USP49-205ENST00000448078 PCOLCE2Q9UKZ9 415 aa7.93□□□□□ -1.14
USP49-205ENST00000448078 PCNTO95613 3336 aa7.93□□□□□ -1.14
USP49-205ENST00000448078 SYNGAP1Q96PV0 1343 aa7.93□□□□□ -1.14
USP49-205ENST00000448078 CNTNAP4Q9C0A0 1308 aa7.93□□□□□ -1.14
USP49-205ENST00000448078 A0A1W2PP64 1363 aa7.93□□□□□ -1.14
USP49-205ENST00000448078 FLT4P35916 1363 aa7.93□□□□□ -1.14
USP49-205ENST00000448078 C4BP0C0L5 1744 aa7.92□□□□□ -1.14
USP49-205ENST00000448078 COBLO75128 1261 aa7.92□□□□□ -1.14
USP49-205ENST00000448078 PHKG2P15735 406 aa7.92□□□□□ -1.14
USP49-205ENST00000448078 ECE1P42892 770 aa7.92□□□□□ -1.14
USP49-205ENST00000448078 ETF1P62495 437 aaKnown RBP7.92□□□□□ -1.14
USP49-205ENST00000448078 CYP27A1Q02318 531 aa7.92□□□□□ -1.14
USP49-205ENST00000448078 SEPT6Q14141 434 aa7.92□□□□□ -1.14
USP49-205ENST00000448078 SOGA3Q5TF21 947 aa7.92□□□□□ -1.14
USP49-205ENST00000448078 LDHDQ86WU2 507 aa7.92□□□□□ -1.14
USP49-205ENST00000448078 C2CD5Q86YS7 1000 aa7.92□□□□□ -1.14
USP49-205ENST00000448078 EZH1Q92800 747 aaPredicted RBP7.92□□□□□ -1.14
USP49-205ENST00000448078 ZFP64Q9NPA5 681 aa7.92□□□□□ -1.14
USP49-205ENST00000448078 CICQ96RK0 1608 aaPredicted RBP7.92□□□□□ -1.14
USP49-205ENST00000448078 FAM208AQ9UK61 1670 aaKnown RBP7.92□□□□□ -1.14
USP49-205ENST00000448078 ST20-MTHFSA0A0A6YYL1 179 aa7.91□□□□□ -1.14
USP49-205ENST00000448078 BPNT1O95861 308 aa7.91□□□□□ -1.14
USP49-205ENST00000448078 PDE6BP35913 854 aa7.91□□□□□ -1.14
USP49-205ENST00000448078 RGS19P49795 217 aa7.91□□□□□ -1.14
USP49-205ENST00000448078 MTHFSP49914 203 aa7.91□□□□□ -1.14
USP49-205ENST00000448078 ERVK-24P63145 666 aa7.91□□□□□ -1.14
USP49-205ENST00000448078 CDK5R2Q13319 367 aa7.91□□□□□ -1.14
USP49-205ENST00000448078 AMOTQ4VCS5 1084 aa7.91□□□□□ -1.14
USP49-205ENST00000448078 ZC3H12AQ5D1E8 599 aaKnown RBP7.91□□□□□ -1.14
USP49-205ENST00000448078 C1orf141Q5JVX7 400 aa7.91□□□□□ -1.14
USP49-205ENST00000448078 ZAR1Q86SH2 424 aa7.91□□□□□ -1.14
USP49-205ENST00000448078 PNMA8AQ86V59 439 aaPredicted RBP7.91□□□□□ -1.14
USP49-205ENST00000448078 RNF214Q8ND24 703 aa7.91□□□□□ -1.14
USP49-205ENST00000448078 ZNF622Q969S3 477 aaKnown RBP eCLIP7.91□□□□□ -1.14
USP49-205ENST00000448078 C5P01031 1676 aa7.91□□□□□ -1.14
USP49-205ENST00000448078 DOT1LQ8TEK3 1739 aa7.91□□□□□ -1.14
USP49-205ENST00000448078 LTN1O94822 1766 aa7.91□□□□□ -1.14
USP49-205ENST00000448078 TUBGCP6Q96RT7 1819 aa7.91□□□□□ -1.14
USP49-205ENST00000448078 CNTNAP1P78357 1384 aa7.9□□□□□ -1.14
USP49-205ENST00000448078 WASHC2AQ641Q2 1341 aa7.9□□□□□ -1.14
USP49-205ENST00000448078 FAM170BA6NMN3 283 aa7.9□□□□□ -1.14
USP49-205ENST00000448078 CYP26A1O43174 497 aa7.9□□□□□ -1.14
USP49-205ENST00000448078 F13BP05160 661 aa7.9□□□□□ -1.14
USP49-205ENST00000448078 TM4SF1P30408 202 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms