RNA–Protein interactions for RNA: ENST00000447726.6

PBX3-207, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene PBX3, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-207ENST00000447726 TTI2Q6NXR4 508 aa18.35■□□□□ 0.53
PBX3-207ENST00000447726 BICDL1Q6ZP65 573 aa18.35■□□□□ 0.53
PBX3-207ENST00000447726 CCDC148Q8NFR7 591 aa18.35■□□□□ 0.53
PBX3-207ENST00000447726 KAT14Q9H8E8 782 aa18.35■□□□□ 0.53
PBX3-207ENST00000447726 MCM9Q9NXL9 1143 aa18.35■□□□□ 0.53
PBX3-207ENST00000447726 MYH14Q7Z406 1995 aaKnown RBP18.35■□□□□ 0.53
PBX3-207ENST00000447726 CCDC194A0A1B0GVG4 234 aa18.35■□□□□ 0.53
PBX3-207ENST00000447726 M0R2N6 131 aa18.35■□□□□ 0.53
PBX3-207ENST00000447726 TFAP4Q01664 338 aa18.35■□□□□ 0.53
PBX3-207ENST00000447726 SF3B3Q15393 1217 aaKnown RBP18.35■□□□□ 0.53
PBX3-207ENST00000447726 PCDHA6Q9UN73 950 aa18.35■□□□□ 0.53
PBX3-207ENST00000447726 PCDHA8Q9Y5H6 950 aa18.35■□□□□ 0.53
PBX3-207ENST00000447726 SAR1BQ9Y6B6 198 aa18.35■□□□□ 0.53
PBX3-207ENST00000447726 PHLPP1O60346 1717 aa18.35■□□□□ 0.53
PBX3-207ENST00000447726 NKRFO15226 690 aaKnown RBP eCLIP18.34■□□□□ 0.53
PBX3-207ENST00000447726 USP14P54578 494 aa18.34■□□□□ 0.53
PBX3-207ENST00000447726 KCNB1Q14721 858 aa18.34■□□□□ 0.53
PBX3-207ENST00000447726 TSR1Q2NL82 804 aaKnown RBP18.34■□□□□ 0.53
PBX3-207ENST00000447726 SMIM5Q71RC9 77 aa18.34■□□□□ 0.53
PBX3-207ENST00000447726 GIMAP8Q8ND71 665 aaPredicted RBP18.34■□□□□ 0.53
PBX3-207ENST00000447726 PNMA1Q8ND90 353 aa18.34■□□□□ 0.53
PBX3-207ENST00000447726 ZFP91Q96JP5 570 aaPredicted RBP18.34■□□□□ 0.53
PBX3-207ENST00000447726 DUSP9Q99956 384 aaKnown RBP18.34■□□□□ 0.53
PBX3-207ENST00000447726 THAP9Q9H5L6 903 aa18.34■□□□□ 0.53
PBX3-207ENST00000447726 ATP8A2Q9NTI2 1148 aa18.34■□□□□ 0.53
PBX3-207ENST00000447726 KBTBD4Q9NVX7 518 aa18.34■□□□□ 0.53
PBX3-207ENST00000447726 DUSP10Q9Y6W6 482 aa18.34■□□□□ 0.53
PBX3-207ENST00000447726 DLEC1Q9Y238 1755 aa18.34■□□□□ 0.53
PBX3-207ENST00000447726 PSMA7O14818 248 aa18.34■□□□□ 0.53
PBX3-207ENST00000447726 RHOBTB3O94955 611 aa18.34■□□□□ 0.53
PBX3-207ENST00000447726 DYNLL2Q96FJ2 89 aa18.34■□□□□ 0.53
PBX3-207ENST00000447726 TUBGCP2Q9BSJ2 902 aa18.34■□□□□ 0.53
PBX3-207ENST00000447726 MAGEC2Q9UBF1 373 aaPredicted RBP18.34■□□□□ 0.53
PBX3-207ENST00000447726 ARPP21Q9UBL0 812 aaPredicted RBP18.34■□□□□ 0.53
PBX3-207ENST00000447726 FEZ2Q9UHY8 353 aaPredicted RBP18.34■□□□□ 0.53
PBX3-207ENST00000447726 ZMYND10O75800 440 aa18.33■□□□□ 0.53
PBX3-207ENST00000447726 HSP90B2PQ58FF3 399 aa18.33■□□□□ 0.53
PBX3-207ENST00000447726 KIAA1328Q86T90 577 aa18.33■□□□□ 0.53
PBX3-207ENST00000447726 CSGALNACT2Q8N6G5 542 aa18.33■□□□□ 0.53
PBX3-207ENST00000447726 GDAP1L1Q96MZ0 367 aa18.33■□□□□ 0.53
PBX3-207ENST00000447726 CYTH3O43739 400 aa18.33■□□□□ 0.52
PBX3-207ENST00000447726 TUBBP07437 444 aa18.33■□□□□ 0.52
PBX3-207ENST00000447726 SRGNP10124 158 aa18.33■□□□□ 0.52
PBX3-207ENST00000447726 TRIM21P19474 475 aaKnown RBP18.33■□□□□ 0.52
PBX3-207ENST00000447726 DNM2P50570 870 aa18.33■□□□□ 0.52
PBX3-207ENST00000447726 MEA1Q16626 185 aa18.33■□□□□ 0.52
PBX3-207ENST00000447726 PAPD7Q5XG87 772 aaKnown RBP18.33■□□□□ 0.52
PBX3-207ENST00000447726 HEATR3Q7Z4Q2 680 aa18.33■□□□□ 0.52
PBX3-207ENST00000447726 JAKMIP2Q96AA8 810 aa18.33■□□□□ 0.52
PBX3-207ENST00000447726 TTYH3Q9C0H2 523 aa18.33■□□□□ 0.52
PBX3-207ENST00000447726 A0A1B0GUL6 1792 aa18.32■□□□□ 0.52
PBX3-207ENST00000447726 USP17L3A6NCW0 530 aa18.32■□□□□ 0.52
PBX3-207ENST00000447726 USP17L4A6NCW7 530 aa18.32■□□□□ 0.52
PBX3-207ENST00000447726 ZNF185O15231 689 aa18.32■□□□□ 0.52
PBX3-207ENST00000447726 CYP27A1Q02318 531 aa18.32■□□□□ 0.52
PBX3-207ENST00000447726 STIM1Q13586 685 aa18.32■□□□□ 0.52
PBX3-207ENST00000447726 SBK1Q52WX2 424 aa18.32■□□□□ 0.52
PBX3-207ENST00000447726 FOXR1Q6PIV2 292 aa18.32■□□□□ 0.52
PBX3-207ENST00000447726 USP17L1Q7RTZ2 530 aa18.32■□□□□ 0.52
PBX3-207ENST00000447726 FAM71BQ8TC56 605 aa18.32■□□□□ 0.52
PBX3-207ENST00000447726 TBC1D8BQ0IIM8 1120 aa18.32■□□□□ 0.52
PBX3-207ENST00000447726 CCSER1Q9C0I3 900 aa18.32■□□□□ 0.52
PBX3-207ENST00000447726 NHEJ1Q9H9Q4 299 aaPredicted RBP18.32■□□□□ 0.52
PBX3-207ENST00000447726 SH3GLB2Q9NR46 395 aa18.32■□□□□ 0.52
PBX3-207ENST00000447726 EXOC1Q9NV70 894 aa18.32■□□□□ 0.52
PBX3-207ENST00000447726 MAD2L2Q9UI95 211 aa18.32■□□□□ 0.52
PBX3-207ENST00000447726 ZNF652Q9Y2D9 606 aa18.32■□□□□ 0.52
PBX3-207ENST00000447726 DOT1LQ8TEK3 1739 aa18.32■□□□□ 0.52
PBX3-207ENST00000447726 HIBADHP31937 336 aaKnown RBP18.31■□□□□ 0.52
PBX3-207ENST00000447726 ANKRD40Q6AI12 368 aa18.31■□□□□ 0.52
PBX3-207ENST00000447726 LEKR1Q6ZMV7 388 aa18.31■□□□□ 0.52
PBX3-207ENST00000447726 TRIM66O15016 1216 aa18.31■□□□□ 0.52
PBX3-207ENST00000447726 PLCG1P19174 1290 aa18.31■□□□□ 0.52
PBX3-207ENST00000447726 GTF2E1P29083 439 aaPredicted RBP18.31■□□□□ 0.52
PBX3-207ENST00000447726 KRT83P78385 493 aa18.31■□□□□ 0.52
PBX3-207ENST00000447726 STK4Q13043 487 aa18.31■□□□□ 0.52
PBX3-207ENST00000447726 TXNRD3Q86VQ6 643 aa18.31■□□□□ 0.52
PBX3-207ENST00000447726 CPVLQ9H3G5 476 aa18.31■□□□□ 0.52
PBX3-207ENST00000447726 PDE2AO00408 941 aaPredicted RBP18.3■□□□□ 0.52
PBX3-207ENST00000447726 KRT86O43790 486 aa18.3■□□□□ 0.52
PBX3-207ENST00000447726 TNNT3P45378 269 aaPredicted RBP18.3■□□□□ 0.52
PBX3-207ENST00000447726 KCNQ4P56696 695 aa18.3■□□□□ 0.52
PBX3-207ENST00000447726 GSPT2Q8IYD1 628 aaKnown RBP18.3■□□□□ 0.52
PBX3-207ENST00000447726 FAM204AQ9H8W3 233 aa18.3■□□□□ 0.52
PBX3-207ENST00000447726 CWC15Q9P013 229 aaKnown RBP18.3■□□□□ 0.52
PBX3-207ENST00000447726 MACROD2A1Z1Q3 448 aa18.3■□□□□ 0.52
PBX3-207ENST00000447726 FCER1AP12319 257 aa18.3■□□□□ 0.52
PBX3-207ENST00000447726 DDB1Q16531 1140 aa18.3■□□□□ 0.52
PBX3-207ENST00000447726 CCDC178Q5BJE1 867 aa18.3■□□□□ 0.52
PBX3-207ENST00000447726 DGKHQ86XP1 1220 aa18.3■□□□□ 0.52
PBX3-207ENST00000447726 CCDC24Q8N4L8 307 aa18.3■□□□□ 0.52
PBX3-207ENST00000447726 BBXQ8WY36 941 aaPredicted RBP18.3■□□□□ 0.52
PBX3-207ENST00000447726 HPS3Q969F9 1004 aa18.3■□□□□ 0.52
PBX3-207ENST00000447726 PCMTD1Q96MG8 357 aaPredicted RBP18.3■□□□□ 0.52
PBX3-207ENST00000447726 HINFPQ9BQA5 517 aa18.3■□□□□ 0.52
PBX3-207ENST00000447726 PODXL2Q9NZ53 605 aa18.3■□□□□ 0.52
PBX3-207ENST00000447726 MYO1CO00159 1063 aa18.3■□□□□ 0.52
PBX3-207ENST00000447726 SYF2O95926 243 aaKnown RBP18.3■□□□□ 0.52
PBX3-207ENST00000447726 GOLGA8HP0CJ92 632 aa18.3■□□□□ 0.52
PBX3-207ENST00000447726 PDE4DQ08499 809 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms