RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 GREM2Q9H772 168 aa4.23□□□□□ -1.73
PMS1-215ENST00000447232 MSRAQ9UJ68 235 aa4.23□□□□□ -1.73
PMS1-215ENST00000447232 ZHX2Q9Y6X8 837 aa4.23□□□□□ -1.73
PMS1-215ENST00000447232 UTYO14607 1347 aa4.23□□□□□ -1.73
PMS1-215ENST00000447232 MYBBP1AQ9BQG0 1328 aaKnown RBP4.23□□□□□ -1.73
PMS1-215ENST00000447232 ACACBO00763 2458 aa4.23□□□□□ -1.73
PMS1-215ENST00000447232 ATRNL1Q5VV63 1379 aa4.23□□□□□ -1.73
PMS1-215ENST00000447232 MED19A0JLT2 244 aaPredicted RBP4.23□□□□□ -1.73
PMS1-215ENST00000447232 PHF20L1A8MW92 1017 aa4.23□□□□□ -1.73
PMS1-215ENST00000447232 SNAP23O00161 211 aa4.23□□□□□ -1.73
PMS1-215ENST00000447232 IGHA2P01877 340 aa4.23□□□□□ -1.73
PMS1-215ENST00000447232 THBS1P07996 1170 aa4.23□□□□□ -1.73
PMS1-215ENST00000447232 RAG1P15918 1043 aa4.23□□□□□ -1.73
PMS1-215ENST00000447232 ID4P47928 161 aa4.23□□□□□ -1.73
PMS1-215ENST00000447232 EIF4G2P78344 907 aaKnown RBP eCLIP4.23□□□□□ -1.73
PMS1-215ENST00000447232 HDLBPQ00341 1268 aaKnown RBP4.23□□□□□ -1.73
PMS1-215ENST00000447232 MFSD14BQ5SR56 506 aa4.23□□□□□ -1.73
PMS1-215ENST00000447232 TREML2Q5T2D2 321 aa4.23□□□□□ -1.73
PMS1-215ENST00000447232 GJC2Q5T442 439 aaPredicted RBP4.23□□□□□ -1.73
PMS1-215ENST00000447232 SLC28A3Q9HAS3 691 aa4.23□□□□□ -1.73
PMS1-215ENST00000447232 GAKO14976 1311 aa4.23□□□□□ -1.73
PMS1-215ENST00000447232 GVINP1Q7Z2Y8 2422 aa4.23□□□□□ -1.73
PMS1-215ENST00000447232 PROB1E7EW31 1015 aa4.22□□□□□ -1.73
PMS1-215ENST00000447232 IRS1P35568 1242 aa4.22□□□□□ -1.73
PMS1-215ENST00000447232 USP4Q13107 963 aa4.22□□□□□ -1.73
PMS1-215ENST00000447232 COL9A2Q14055 689 aaPredicted RBP4.22□□□□□ -1.73
PMS1-215ENST00000447232 ZNF804AQ7Z570 1209 aa4.22□□□□□ -1.73
PMS1-215ENST00000447232 SCYL3Q8IZE3 742 aa4.22□□□□□ -1.73
PMS1-215ENST00000447232 CCDC191Q8NCU4 936 aa4.22□□□□□ -1.73
PMS1-215ENST00000447232 APBA2Q99767 749 aa4.22□□□□□ -1.73
PMS1-215ENST00000447232 PRRX2Q99811 253 aa4.22□□□□□ -1.73
PMS1-215ENST00000447232 CHPF2Q9P2E5 772 aa4.22□□□□□ -1.73
PMS1-215ENST00000447232 TECTAO75443 2155 aa4.22□□□□□ -1.73
PMS1-215ENST00000447232 DNAH14Q0VDD8 3507 aa4.22□□□□□ -1.73
PMS1-215ENST00000447232 DOCK1Q14185 1865 aa4.22□□□□□ -1.73
PMS1-215ENST00000447232 KMT2EQ8IZD2 1858 aa4.22□□□□□ -1.73
PMS1-215ENST00000447232 STAU1O95793 577 aaKnown RBP4.22□□□□□ -1.73
PMS1-215ENST00000447232 RGS2P41220 211 aa4.22□□□□□ -1.73
PMS1-215ENST00000447232 PHKA2P46019 1235 aa4.22□□□□□ -1.73
PMS1-215ENST00000447232 MARSP56192 900 aaKnown RBP4.22□□□□□ -1.73
PMS1-215ENST00000447232 CHRNDQ07001 517 aa4.22□□□□□ -1.73
PMS1-215ENST00000447232 VAC14Q08AM6 782 aa4.22□□□□□ -1.73
PMS1-215ENST00000447232 GRIK5Q16478 980 aa4.22□□□□□ -1.73
PMS1-215ENST00000447232 APOBEC3HQ6NTF7 200 aaKnown RBP4.22□□□□□ -1.73
PMS1-215ENST00000447232 ARRDC4Q8NCT1 418 aa4.22□□□□□ -1.73
PMS1-215ENST00000447232 TRPV1Q8NER1 839 aa4.22□□□□□ -1.73
PMS1-215ENST00000447232 TDRD7Q8NHU6 1098 aaKnown RBP4.22□□□□□ -1.73
PMS1-215ENST00000447232 JARID2Q92833 1246 aaPredicted RBP4.22□□□□□ -1.73
PMS1-215ENST00000447232 ZDHHC15Q96MV8 337 aa4.22□□□□□ -1.73
PMS1-215ENST00000447232 ZSCAN10Q96SZ4 725 aaPredicted RBP4.22□□□□□ -1.73
PMS1-215ENST00000447232 NUCKS1Q9H1E3 243 aaKnown RBP4.22□□□□□ -1.73
PMS1-215ENST00000447232 GDPD2Q9HCC8 539 aa4.22□□□□□ -1.73
PMS1-215ENST00000447232 PRM3Q9NNZ6 103 aa4.22□□□□□ -1.73
PMS1-215ENST00000447232 FLRT1Q9NZU1 646 aa4.22□□□□□ -1.73
PMS1-215ENST00000447232 TSPYL4Q9UJ04 414 aa4.22□□□□□ -1.73
PMS1-215ENST00000447232 ZNF521Q96K83 1311 aa4.22□□□□□ -1.73
PMS1-215ENST00000447232 KBTBD13C9JR72 458 aa4.21□□□□□ -1.73
PMS1-215ENST00000447232 IGHMBP2P38935 993 aaKnown RBP4.21□□□□□ -1.73
PMS1-215ENST00000447232 KCNJ4P48050 445 aa4.21□□□□□ -1.73
PMS1-215ENST00000447232 MAP3K10Q02779 954 aa4.21□□□□□ -1.73
PMS1-215ENST00000447232 SLFNL1Q499Z3 407 aa4.21□□□□□ -1.73
PMS1-215ENST00000447232 FAM151AQ8WW52 585 aa4.21□□□□□ -1.73
PMS1-215ENST00000447232 ACDQ96AP0 544 aa4.21□□□□□ -1.73
PMS1-215ENST00000447232 SCARF2Q96GP6 870 aaPredicted RBP4.21□□□□□ -1.73
PMS1-215ENST00000447232 TRERF1Q96PN7 1200 aa4.21□□□□□ -1.73
PMS1-215ENST00000447232 MRIQ9BWK5 157 aa4.21□□□□□ -1.73
PMS1-215ENST00000447232 DBF4Q9UBU7 674 aaPredicted RBP4.21□□□□□ -1.73
PMS1-215ENST00000447232 COL4A6Q14031 1691 aa4.21□□□□□ -1.74
PMS1-215ENST00000447232 TIMP1P01033 207 aa4.21□□□□□ -1.74
PMS1-215ENST00000447232 DMDP11532 3685 aa4.21□□□□□ -1.74
PMS1-215ENST00000447232 CYBAP13498 195 aa4.21□□□□□ -1.74
PMS1-215ENST00000447232 SLC5A1P13866 664 aa4.21□□□□□ -1.74
PMS1-215ENST00000447232 ADCYAP1R1P41586 468 aa4.21□□□□□ -1.74
PMS1-215ENST00000447232 FAAP100Q0VG06 881 aa4.21□□□□□ -1.74
PMS1-215ENST00000447232 KRT40Q6A162 431 aa4.21□□□□□ -1.74
PMS1-215ENST00000447232 MFSD5Q6N075 450 aa4.21□□□□□ -1.74
PMS1-215ENST00000447232 ASCL5Q7RTU5 278 aa4.21□□□□□ -1.74
PMS1-215ENST00000447232 ANKRD33Q7Z3H0 272 aa4.21□□□□□ -1.74
PMS1-215ENST00000447232 BMP8AQ7Z5Y6 402 aa4.21□□□□□ -1.74
PMS1-215ENST00000447232 TOX2Q96NM4 488 aa4.21□□□□□ -1.74
PMS1-215ENST00000447232 KRTAP9-8Q9BYQ0 159 aa4.21□□□□□ -1.74
PMS1-215ENST00000447232 ASCC2Q9H1I8 757 aaPredicted RBP4.21□□□□□ -1.74
PMS1-215ENST00000447232 ETNK1Q9HBU6 452 aa4.21□□□□□ -1.74
PMS1-215ENST00000447232 TXNRD2Q9NNW7 524 aa4.21□□□□□ -1.74
PMS1-215ENST00000447232 ENAMQ9NRM1 1142 aa4.21□□□□□ -1.74
PMS1-215ENST00000447232 FAM86C1Q9NVL1 165 aa4.21□□□□□ -1.74
PMS1-215ENST00000447232 BABAM1Q9NWV8 329 aa4.21□□□□□ -1.74
PMS1-215ENST00000447232 TMOD2Q9NZR1 351 aa4.21□□□□□ -1.74
PMS1-215ENST00000447232 TBX21Q9UL17 535 aa4.21□□□□□ -1.74
PMS1-215ENST00000447232 DOLKQ9UPQ8 538 aa4.21□□□□□ -1.74
PMS1-215ENST00000447232 FASNP49327 2511 aaKnown RBP4.21□□□□□ -1.74
PMS1-215ENST00000447232 DMXL1Q9Y485 3027 aa4.21□□□□□ -1.74
PMS1-215ENST00000447232 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.2□□□□□ -1.74
PMS1-215ENST00000447232 A0A1B0GTH6 734 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 EPOPA6NHQ4 379 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 TRIM75PA6NK02 468 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 RFXAPO00287 272 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 MX2P20592 715 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 MAPK4P31152 587 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 PPIGQ13427 754 aaKnown RBP eCLIP4.2□□□□□ -1.742e-6■■□□□ 12.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms