RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 ABRAQ8N0Z2 381 aa17.38■□□□□ 0.37
HDAC4-204ENST00000446876 DEFB118Q96PH6 123 aa17.38■□□□□ 0.37
HDAC4-204ENST00000446876 UBA5Q9GZZ9 404 aa17.38■□□□□ 0.37
HDAC4-204ENST00000446876 RANBP17Q9H2T7 1088 aaKnown RBP17.38■□□□□ 0.37
HDAC4-204ENST00000446876 GPHNQ9NQX3 736 aaPredicted RBP17.38■□□□□ 0.37
HDAC4-204ENST00000446876 MYH6P13533 1939 aa17.37■□□□□ 0.37
HDAC4-204ENST00000446876 FDX1P10109 184 aa17.37■□□□□ 0.37
HDAC4-204ENST00000446876 ALAS1P13196 640 aa17.37■□□□□ 0.37
HDAC4-204ENST00000446876 CCND3P30281 292 aaPredicted RBP17.37■□□□□ 0.37
HDAC4-204ENST00000446876 U2AF1L4Q8WU68 220 aaKnown RBP17.37■□□□□ 0.37
HDAC4-204ENST00000446876 PAK6Q9NQU5 681 aaPredicted RBP17.37■□□□□ 0.37
HDAC4-204ENST00000446876 RNF146Q9NTX7 359 aa17.37■□□□□ 0.37
HDAC4-204ENST00000446876 LCTP09848 1927 aa17.37■□□□□ 0.37
HDAC4-204ENST00000446876 GJA8P48165 433 aa17.36■□□□□ 0.37
HDAC4-204ENST00000446876 TMEM67Q5HYA8 995 aa17.36■□□□□ 0.37
HDAC4-204ENST00000446876 GPATCH4Q5T3I0 446 aaKnown RBP17.36■□□□□ 0.37
HDAC4-204ENST00000446876 MFSD14CQ5VZR4 134 aa17.36■□□□□ 0.37
HDAC4-204ENST00000446876 MAML3Q96JK9 1138 aa17.36■□□□□ 0.37
HDAC4-204ENST00000446876 HMX1Q9NP08 348 aaPredicted RBP17.36■□□□□ 0.37
HDAC4-204ENST00000446876 CCPG1Q9ULG6 757 aa17.36■□□□□ 0.37
HDAC4-204ENST00000446876 MCM3APO60318 1980 aa17.36■□□□□ 0.37
HDAC4-204ENST00000446876 RPTORQ8N122 1335 aa17.36■□□□□ 0.37
HDAC4-204ENST00000446876 ERICH2A1L162 156 aa17.35■□□□□ 0.37
HDAC4-204ENST00000446876 PRC1O43663 620 aa17.35■□□□□ 0.37
HDAC4-204ENST00000446876 IGHA2P01877 340 aa17.35■□□□□ 0.37
HDAC4-204ENST00000446876 PARP1P09874 1014 aaKnown RBP17.35■□□□□ 0.37
HDAC4-204ENST00000446876 WTAPQ15007 396 aa17.35■□□□□ 0.37
HDAC4-204ENST00000446876 ZNF792Q3KQV3 632 aa17.35■□□□□ 0.37
HDAC4-204ENST00000446876 MUM1L1Q5H9M0 696 aa17.35■□□□□ 0.37
HDAC4-204ENST00000446876 OLFML2BQ68BL8 750 aa17.35■□□□□ 0.37
HDAC4-204ENST00000446876 RASEFQ8IZ41 740 aa17.35■□□□□ 0.37
HDAC4-204ENST00000446876 STAG2Q8N3U4 1231 aa17.35■□□□□ 0.37
HDAC4-204ENST00000446876 TRPV1Q8NER1 839 aa17.35■□□□□ 0.37
HDAC4-204ENST00000446876 CHST13Q8NET6 341 aa17.35■□□□□ 0.37
HDAC4-204ENST00000446876 TRERF1Q96PN7 1200 aa17.35■□□□□ 0.37
HDAC4-204ENST00000446876 SGPL1O95470 568 aa17.34■□□□□ 0.37
HDAC4-204ENST00000446876 ICAM1P05362 532 aa17.34■□□□□ 0.37
HDAC4-204ENST00000446876 SART3Q15020 963 aaKnown RBP17.34■□□□□ 0.37
HDAC4-204ENST00000446876 ASPRV1Q53RT3 343 aa17.34■□□□□ 0.37
HDAC4-204ENST00000446876 ANKRD35Q8N283 1001 aa17.34■□□□□ 0.37
HDAC4-204ENST00000446876 IGDCC4Q8TDY8 1250 aa17.34■□□□□ 0.37
HDAC4-204ENST00000446876 DDX11Q96FC9 970 aa17.34■□□□□ 0.37
HDAC4-204ENST00000446876 LRRC2Q9BYS8 371 aa17.34■□□□□ 0.37
HDAC4-204ENST00000446876 ACAD9Q9H845 621 aa17.34■□□□□ 0.37
HDAC4-204ENST00000446876 SLC5A4Q9NY91 659 aa17.34■□□□□ 0.37
HDAC4-204ENST00000446876 FBXO40Q9UH90 709 aa17.34■□□□□ 0.37
HDAC4-204ENST00000446876 DNAJC25-GNG10A0A024R161 153 aa17.33■□□□□ 0.36
HDAC4-204ENST00000446876 TFRCP02786 760 aaKnown RBP17.33■□□□□ 0.36
HDAC4-204ENST00000446876 ADCK5Q3MIX3 580 aa17.33■□□□□ 0.36
HDAC4-204ENST00000446876 PRAMEF19Q5SWL8 479 aa17.33■□□□□ 0.36
HDAC4-204ENST00000446876 RNF20Q5VTR2 975 aa17.33■□□□□ 0.36
HDAC4-204ENST00000446876 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.33■□□□□ 0.36
HDAC4-204ENST00000446876 ADGRF4Q8IZF3 695 aa17.33■□□□□ 0.36
HDAC4-204ENST00000446876 FGD4Q96M96 766 aa17.33■□□□□ 0.36
HDAC4-204ENST00000446876 MYL10Q9BUA6 226 aa17.33■□□□□ 0.36
HDAC4-204ENST00000446876 LY9Q9HBG7 655 aa17.33■□□□□ 0.36
HDAC4-204ENST00000446876 A1CFQ9NQ94 594 aaKnown RBP17.33■□□□□ 0.36
HDAC4-204ENST00000446876 MAD2L2Q9UI95 211 aa17.33■□□□□ 0.36
HDAC4-204ENST00000446876 TNRC18O15417 2968 aaPredicted RBP17.33■□□□□ 0.36
HDAC4-204ENST00000446876 BAZ2BQ9UIF8 2168 aaKnown RBP17.32■□□□□ 0.36
HDAC4-204ENST00000446876 SH2B2O14492 632 aaPredicted RBP17.32■□□□□ 0.36
HDAC4-204ENST00000446876 DHX16O60231 1041 aaKnown RBP17.32■□□□□ 0.36
HDAC4-204ENST00000446876 CYBAP13498 195 aa17.32■□□□□ 0.36
HDAC4-204ENST00000446876 CNGA1P29973 690 aa17.32■□□□□ 0.36
HDAC4-204ENST00000446876 MCM5P33992 734 aa17.32■□□□□ 0.36
HDAC4-204ENST00000446876 CNTN2Q02246 1040 aa17.32■□□□□ 0.36
HDAC4-204ENST00000446876 GRM4Q14833 912 aa17.32■□□□□ 0.36
HDAC4-204ENST00000446876 CDC37Q16543 378 aaPredicted RBP17.32■□□□□ 0.36
HDAC4-204ENST00000446876 TKFCQ3LXA3 575 aa17.32■□□□□ 0.36
HDAC4-204ENST00000446876 TCEANC2Q96MN5 208 aa17.32■□□□□ 0.36
HDAC4-204ENST00000446876 CRISPLD2Q9H0B8 497 aa17.32■□□□□ 0.36
HDAC4-204ENST00000446876 VAT1LQ9HCJ6 419 aa17.32■□□□□ 0.36
HDAC4-204ENST00000446876 MKI67P46013 3256 aaKnown RBP17.32■□□□□ 0.36
HDAC4-204ENST00000446876 NFIBO00712 420 aa17.31■□□□□ 0.36
HDAC4-204ENST00000446876 SLC35G1Q2M3R5 365 aa17.31■□□□□ 0.36
HDAC4-204ENST00000446876 USH1GQ495M9 461 aa17.31■□□□□ 0.36
HDAC4-204ENST00000446876 NSMFQ6X4W1 530 aa17.31■□□□□ 0.36
HDAC4-204ENST00000446876 NUP133Q8WUM0 1156 aa17.31■□□□□ 0.36
HDAC4-204ENST00000446876 NEK1Q96PY6 1258 aa17.31■□□□□ 0.36
HDAC4-204ENST00000446876 TINF2Q9BSI4 451 aa17.31■□□□□ 0.36
HDAC4-204ENST00000446876 LRRC37A2A6NM11 1700 aa17.3■□□□□ 0.36
HDAC4-204ENST00000446876 PALM3A6NDB9 673 aaPredicted RBP17.3■□□□□ 0.36
HDAC4-204ENST00000446876 KLRF2D3W0D1 207 aa17.3■□□□□ 0.36
HDAC4-204ENST00000446876 FARP2O94887 1054 aaPredicted RBP17.3■□□□□ 0.36
HDAC4-204ENST00000446876 TROAPQ12815 778 aa17.3■□□□□ 0.36
HDAC4-204ENST00000446876 QRICH1Q2TAL8 776 aa17.3■□□□□ 0.36
HDAC4-204ENST00000446876 ANO1Q5XXA6 986 aa17.3■□□□□ 0.36
HDAC4-204ENST00000446876 CATIPQ7Z7H3 387 aa17.3■□□□□ 0.36
HDAC4-204ENST00000446876 RAB11FIP4Q86YS3 637 aa17.3■□□□□ 0.36
HDAC4-204ENST00000446876 ZNF654Q8IZM8 581 aa17.3■□□□□ 0.36
HDAC4-204ENST00000446876 DIS3LQ8TF46 1054 aaKnown RBP17.3■□□□□ 0.36
HDAC4-204ENST00000446876 TMEM87BQ96K49 555 aa17.3■□□□□ 0.36
HDAC4-204ENST00000446876 PURBQ96QR8 312 aaKnown RBP17.3■□□□□ 0.36
HDAC4-204ENST00000446876 JMJD4Q9H9V9 463 aa17.3■□□□□ 0.36
HDAC4-204ENST00000446876 DIS3Q9Y2L1 958 aaKnown RBP17.3■□□□□ 0.36
HDAC4-204ENST00000446876 DDX49Q9Y6V7 483 aaKnown RBP17.3■□□□□ 0.36
HDAC4-204ENST00000446876 WDR19Q8NEZ3 1342 aa17.29■□□□□ 0.36
HDAC4-204ENST00000446876 POTEB2H3BUK9 544 aa17.29■□□□□ 0.36
HDAC4-204ENST00000446876 REC8O95072 547 aa17.29■□□□□ 0.36
HDAC4-204ENST00000446876 CPA1P15085 419 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms