RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 RPS6KA5O75582 802 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 TUBGCP2Q9BSJ2 902 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 ZMYND12Q9H0C1 365 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 TEX33O43247 280 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 MAP3K21Q5TCX8 1036 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 SAMD1Q6SPF0 538 aaPredicted RBP8.64□□□□□ -1.03
SMG1-202ENST00000446231 ADAT2Q7Z6V5 191 aaKnown RBP8.64□□□□□ -1.03
SMG1-202ENST00000446231 FRMD4BQ9Y2L6 1034 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 PGRMC1O00264 195 aaKnown RBP8.63□□□□□ -1.03
SMG1-202ENST00000446231 PPP1R37O75864 691 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 HOOK2Q96ED9 719 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 NOD2Q9HC29 1040 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 MDH1P40925 334 aaKnown RBP8.63□□□□□ -1.03
SMG1-202ENST00000446231 ZNF444Q8N0Y2 327 aaPredicted RBP8.63□□□□□ -1.03
SMG1-202ENST00000446231 BICD1Q96G01 975 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 AP1M1Q9BXS5 423 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 NUF2Q9BZD4 464 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 HOXB7P09629 217 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 RAB21Q9UL25 225 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 DEXIO95424 95 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 TMEM132AQ24JP5 1023 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 LRIG3Q6UXM1 1119 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 APLFQ8IW19 511 aaPredicted RBP8.63□□□□□ -1.03
SMG1-202ENST00000446231 ZMAT2Q96NC0 199 aaKnown RBP8.63□□□□□ -1.03
SMG1-202ENST00000446231 MLXIPQ9HAP2 919 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 LRWD1Q9UFC0 647 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.63□□□□□ -1.03
SMG1-202ENST00000446231 CARMIL3Q8ND23 1372 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 ATP1A1P05023 1023 aaKnown RBP8.63□□□□□ -1.03
SMG1-202ENST00000446231 FERP16591 822 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.63□□□□□ -1.03
SMG1-202ENST00000446231 GNAT1P11488 350 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 CCDC65Q8IXS2 484 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 SUGCTQ9HAC7 445 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 ZNF711Q9Y462 761 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 CCDC97Q96F63 343 aaPredicted RBP8.63□□□□□ -1.03
SMG1-202ENST00000446231 KDM4CQ9H3R0 1056 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 VCPKMTQ9H867 229 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 RNF8O76064 485 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 GNA11P29992 359 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 BICDL1Q6ZP65 573 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 SH2D3CQ8N5H7 860 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 GDAP1Q8TB36 358 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 DZIP3Q86Y13 1208 aaKnown RBP8.63□□□□□ -1.03
SMG1-202ENST00000446231 RIMS2Q9UQ26 1411 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 MAPK13O15264 365 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 SLCO1A2P46721 670 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 EIF3BP55884 814 aaKnown RBP8.63□□□□□ -1.03
SMG1-202ENST00000446231 MTF1Q14872 753 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 SCYL3Q8IZE3 742 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 CHCHD3Q9NX63 227 aaKnown RBP8.63□□□□□ -1.03
SMG1-202ENST00000446231 KRT15P19012 456 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 TMOD1P28289 359 aa8.63□□□□□ -1.03
SMG1-202ENST00000446231 EIF4E1BA6NMX2 242 aaKnown RBP8.62□□□□□ -1.03
SMG1-202ENST00000446231 STARD3NLO95772 234 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 TROVE2P10155 538 aaKnown RBP eCLIP8.62□□□□□ -1.03
SMG1-202ENST00000446231 PDHBP11177 359 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 PREPLQ4J6C6 727 aaPredicted RBP8.62□□□□□ -1.03
SMG1-202ENST00000446231 ALDH8A1Q9H2A2 487 aaPredicted RBP8.62□□□□□ -1.03
SMG1-202ENST00000446231 VPS37BQ9H9H4 285 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 C6orf50Q9HD87 102 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 ZFYVE9O95405 1425 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 BACH1O14867 736 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 STRN3Q13033 797 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 NR1I3Q14994 352 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 PTPROQ16827 1216 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 BZW2Q9Y6E2 419 aaKnown RBP8.62□□□□□ -1.03
SMG1-202ENST00000446231 TRIM65Q6PJ69 517 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 PTPRTO14522 1441 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 UAP1Q16222 522 aaPredicted RBP8.62□□□□□ -1.03
SMG1-202ENST00000446231 IGF2BP3O00425 579 aaKnown RBP eCLIP8.62□□□□□ -1.03
SMG1-202ENST00000446231 PSMD1Q99460 953 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 ARHGEF11O15085 1522 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 CYP7A1P22680 504 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 PSMC4P43686 418 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 SPDYE1Q8NFV5 336 aaPredicted RBP8.62□□□□□ -1.03
SMG1-202ENST00000446231 RRP36Q96EU6 259 aaKnown RBP8.62□□□□□ -1.03
SMG1-202ENST00000446231 ETAA1Q9NY74 926 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 IQSEC3Q9UPP2 1182 aaPredicted RBP8.62□□□□□ -1.03
SMG1-202ENST00000446231 TRAPPC8Q9Y2L5 1435 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 SPDYE3A6NKU9 549 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 MAP2K7O14733 419 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 ZFXP17010 805 aaPredicted RBP8.62□□□□□ -1.03
SMG1-202ENST00000446231 MSH2P43246 934 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 ZNF579Q8NAF0 562 aaKnown RBP8.62□□□□□ -1.03
SMG1-202ENST00000446231 ZKSCAN3Q9BRR0 538 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 STOML1Q9UBI4 398 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 A0A1W2PP64 1363 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 PALMO75781 387 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 H2AFZP0C0S5 128 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 TNNI2P48788 182 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 H2AFVQ71UI9 128 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 AMOTL2Q9Y2J4 779 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 ESCO1Q5FWF5 840 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 SGSM3Q96HU1 749 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 ATP6V0A2Q9Y487 856 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 THAP12O43422 761 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 PLTPP55058 493 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 LRRC1Q9BTT6 524 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 HSPA1LP34931 641 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms