RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 PDE4DIPQ5VU43 2346 aa21.84■■□□□ 1.09
CCDC188-202ENST00000444532 E7EWF7 191 aa21.84■■□□□ 1.09
CCDC188-202ENST00000444532 SLC16A2P36021 539 aa21.84■■□□□ 1.09
CCDC188-202ENST00000444532 CASC1Q6TDU7 716 aa21.84■■□□□ 1.09
CCDC188-202ENST00000444532 NCOA7Q8NI08 942 aa21.84■■□□□ 1.09
CCDC188-202ENST00000444532 AGBL1Q96MI9 1066 aa21.84■■□□□ 1.09
CCDC188-202ENST00000444532 RANBP17Q9H2T7 1088 aaKnown RBP21.84■■□□□ 1.09
CCDC188-202ENST00000444532 DNAJC25-GNG10A0A024R161 153 aa21.83■■□□□ 1.09
CCDC188-202ENST00000444532 MSCO60682 206 aa21.83■■□□□ 1.09
CCDC188-202ENST00000444532 CYBAP13498 195 aa21.83■■□□□ 1.09
CCDC188-202ENST00000444532 LHX8Q68G74 356 aa21.83■■□□□ 1.09
CCDC188-202ENST00000444532 CCDC174Q6PII3 467 aa21.83■■□□□ 1.09
CCDC188-202ENST00000444532 CYB5R4Q7L1T6 521 aa21.83■■□□□ 1.09
CCDC188-202ENST00000444532 RALYLQ86SE5 291 aaKnown RBP21.83■■□□□ 1.09
CCDC188-202ENST00000444532 ANKRD35Q8N283 1001 aa21.83■■□□□ 1.09
CCDC188-202ENST00000444532 ACAD9Q9H845 621 aa21.83■■□□□ 1.09
CCDC188-202ENST00000444532 ICAM1P05362 532 aa21.82■■□□□ 1.08
CCDC188-202ENST00000444532 CNGA1P29973 690 aa21.82■■□□□ 1.08
CCDC188-202ENST00000444532 SNAP25P60880 206 aa21.82■■□□□ 1.08
CCDC188-202ENST00000444532 SEC23AQ15436 765 aa21.82■■□□□ 1.08
CCDC188-202ENST00000444532 IFIT1BQ5T764 474 aaKnown RBP21.82■■□□□ 1.08
CCDC188-202ENST00000444532 MSL3Q8N5Y2 521 aaKnown RBP21.82■■□□□ 1.08
CCDC188-202ENST00000444532 TRPV1Q8NER1 839 aa21.82■■□□□ 1.08
CCDC188-202ENST00000444532 TRERF1Q96PN7 1200 aa21.82■■□□□ 1.08
CCDC188-202ENST00000444532 TINF2Q9BSI4 451 aa21.82■■□□□ 1.08
CCDC188-202ENST00000444532 HOMER2Q9NSB8 354 aa21.82■■□□□ 1.08
CCDC188-202ENST00000444532 NRBP1Q9UHY1 535 aa21.82■■□□□ 1.08
CCDC188-202ENST00000444532 PNMA2Q9UL42 364 aa21.82■■□□□ 1.08
CCDC188-202ENST00000444532 CDC45O75419 566 aa21.81■■□□□ 1.08
CCDC188-202ENST00000444532 ALAS1P13196 640 aa21.81■■□□□ 1.08
CCDC188-202ENST00000444532 ZNF467Q7Z7K2 595 aaPredicted RBP21.81■■□□□ 1.08
CCDC188-202ENST00000444532 ANO2Q9NQ90 1003 aa21.81■■□□□ 1.08
CCDC188-202ENST00000444532 RNF146Q9NTX7 359 aa21.81■■□□□ 1.08
CCDC188-202ENST00000444532 PPP4R2Q9NY27 417 aa21.81■■□□□ 1.08
CCDC188-202ENST00000444532 DDX20Q9UHI6 824 aaKnown RBP21.81■■□□□ 1.08
CCDC188-202ENST00000444532 CCPG1Q9ULG6 757 aa21.81■■□□□ 1.08
CCDC188-202ENST00000444532 TAF6LQ9Y6J9 622 aa21.81■■□□□ 1.08
CCDC188-202ENST00000444532 MKI67P46013 3256 aaKnown RBP21.8■■□□□ 1.08
CCDC188-202ENST00000444532 SART3Q15020 963 aaKnown RBP21.8■■□□□ 1.08
CCDC188-202ENST00000444532 ASPRV1Q53RT3 343 aa21.8■■□□□ 1.08
CCDC188-202ENST00000444532 STOX1Q6ZVD7 989 aa21.8■■□□□ 1.08
CCDC188-202ENST00000444532 NECAB2Q7Z6G3 386 aa21.8■■□□□ 1.08
CCDC188-202ENST00000444532 HTATIP2Q9BUP3 242 aa21.8■■□□□ 1.08
CCDC188-202ENST00000444532 FRMPD3Q5JV73 1810 aa21.8■■□□□ 1.08
CCDC188-202ENST00000444532 ERICH2A1L162 156 aa21.79■■□□□ 1.08
CCDC188-202ENST00000444532 IFIT3O14879 490 aaKnown RBP21.79■■□□□ 1.08
CCDC188-202ENST00000444532 SEPT4O43236 478 aa21.79■■□□□ 1.08
CCDC188-202ENST00000444532 GOLGA8HP0CJ92 632 aa21.79■■□□□ 1.08
CCDC188-202ENST00000444532 NECTIN1Q15223 517 aa21.79■■□□□ 1.08
CCDC188-202ENST00000444532 PRPF38BQ5VTL8 546 aaKnown RBP21.79■■□□□ 1.08
CCDC188-202ENST00000444532 MAMDC4Q6UXC1 1216 aa21.79■■□□□ 1.08
CCDC188-202ENST00000444532 PAWRQ96IZ0 340 aaKnown RBP21.79■■□□□ 1.08
CCDC188-202ENST00000444532 PFASO15067 1338 aa21.79■■□□□ 1.08
CCDC188-202ENST00000444532 SYNGAP1Q96PV0 1343 aa21.79■■□□□ 1.08
CCDC188-202ENST00000444532 PARP1P09874 1014 aaKnown RBP21.78■■□□□ 1.08
CCDC188-202ENST00000444532 PRAMEF19Q5SWL8 479 aa21.78■■□□□ 1.08
CCDC188-202ENST00000444532 A1CFQ9NQ94 594 aaKnown RBP21.78■■□□□ 1.08
CCDC188-202ENST00000444532 POTEB2H3BUK9 544 aa21.77■■□□□ 1.08
CCDC188-202ENST00000444532 SLC27A2O14975 620 aa21.77■■□□□ 1.08
CCDC188-202ENST00000444532 MNX1P50219 401 aaPredicted RBP21.77■■□□□ 1.08
CCDC188-202ENST00000444532 MUM1L1Q5H9M0 696 aa21.77■■□□□ 1.08
CCDC188-202ENST00000444532 CREB3L3Q68CJ9 461 aa21.77■■□□□ 1.08
CCDC188-202ENST00000444532 MB21D2Q8IYB1 491 aaPredicted RBP21.77■■□□□ 1.08
CCDC188-202ENST00000444532 MTA3Q9BTC8 594 aa21.77■■□□□ 1.08
CCDC188-202ENST00000444532 UBA5Q9GZZ9 404 aa21.77■■□□□ 1.08
CCDC188-202ENST00000444532 SMCHD1A6NHR9 2005 aa21.77■■□□□ 1.07
CCDC188-202ENST00000444532 WTAPQ15007 396 aa21.76■■□□□ 1.07
CCDC188-202ENST00000444532 RNF20Q5VTR2 975 aa21.76■■□□□ 1.07
CCDC188-202ENST00000444532 FAM133AQ8N9E0 248 aa21.76■■□□□ 1.07
CCDC188-202ENST00000444532 DIS3LQ8TF46 1054 aaKnown RBP21.76■■□□□ 1.07
CCDC188-202ENST00000444532 DPF3Q92784 378 aa21.76■■□□□ 1.07
CCDC188-202ENST00000444532 CNPY2Q9Y2B0 182 aa21.76■■□□□ 1.07
CCDC188-202ENST00000444532 WDR19Q8NEZ3 1342 aa21.76■■□□□ 1.07
CCDC188-202ENST00000444532 TMEM67Q5HYA8 995 aa21.75■■□□□ 1.07
CCDC188-202ENST00000444532 CHST3Q7LGC8 479 aa21.75■■□□□ 1.07
CCDC188-202ENST00000444532 ADGRF4Q8IZF3 695 aa21.75■■□□□ 1.07
CCDC188-202ENST00000444532 IGDCC4Q8TDY8 1250 aa21.75■■□□□ 1.07
CCDC188-202ENST00000444532 C11orf49Q9H6J7 331 aa21.75■■□□□ 1.07
CCDC188-202ENST00000444532 CYP39A1Q9NYL5 469 aa21.75■■□□□ 1.07
CCDC188-202ENST00000444532 SNAI1O95863 264 aaPredicted RBP21.74■■□□□ 1.07
CCDC188-202ENST00000444532 ZNF865P0CJ78 1059 aaPredicted RBP21.74■■□□□ 1.07
CCDC188-202ENST00000444532 MCM5P33992 734 aa21.74■■□□□ 1.07
CCDC188-202ENST00000444532 ANTXR2P58335 489 aa21.74■■□□□ 1.07
CCDC188-202ENST00000444532 CNTN2Q02246 1040 aa21.74■■□□□ 1.07
CCDC188-202ENST00000444532 ARRDC4Q8NCT1 418 aa21.74■■□□□ 1.07
CCDC188-202ENST00000444532 FGD4Q96M96 766 aa21.74■■□□□ 1.07
CCDC188-202ENST00000444532 CPVLQ9H3G5 476 aa21.74■■□□□ 1.07
CCDC188-202ENST00000444532 PALM3A6NDB9 673 aaPredicted RBP21.73■■□□□ 1.07
CCDC188-202ENST00000444532 NSMFQ6X4W1 530 aa21.73■■□□□ 1.07
CCDC188-202ENST00000444532 ABHD16BQ9H3Z7 469 aa21.73■■□□□ 1.07
CCDC188-202ENST00000444532 MAD2L2Q9UI95 211 aa21.73■■□□□ 1.07
CCDC188-202ENST00000444532 ASB14A6NK59 587 aa21.72■■□□□ 1.07
CCDC188-202ENST00000444532 KLRF2D3W0D1 207 aa21.72■■□□□ 1.07
CCDC188-202ENST00000444532 PRC1O43663 620 aa21.72■■□□□ 1.07
CCDC188-202ENST00000444532 COL6A1P12109 1028 aa21.72■■□□□ 1.07
CCDC188-202ENST00000444532 TAL1P17542 331 aaPredicted RBP21.72■■□□□ 1.07
CCDC188-202ENST00000444532 CDC37Q16543 378 aaPredicted RBP21.72■■□□□ 1.07
CCDC188-202ENST00000444532 ARMCX2Q7L311 632 aa21.72■■□□□ 1.07
CCDC188-202ENST00000444532 CATIPQ7Z7H3 387 aa21.72■■□□□ 1.07
CCDC188-202ENST00000444532 TMTC2Q8N394 836 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms