RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 SHCBP1Q8NEM2 672 aa18.68■□□□□ 0.58
USP39-205ENST00000442708 ABHD8Q96I13 439 aa18.68■□□□□ 0.58
USP39-205ENST00000442708 TEX13BQ9BXU2 312 aa18.68■□□□□ 0.58
USP39-205ENST00000442708 JMJD4Q9H9V9 463 aa18.68■□□□□ 0.58
USP39-205ENST00000442708 VAT1LQ9HCJ6 419 aa18.68■□□□□ 0.58
USP39-205ENST00000442708 PDRG1Q9NUG6 133 aa18.68■□□□□ 0.58
USP39-205ENST00000442708 SRRDQ9UH36 339 aa18.68■□□□□ 0.58
USP39-205ENST00000442708 HPS5Q9UPZ3 1129 aa18.68■□□□□ 0.58
USP39-205ENST00000442708 PLEKHA8P1O95397 391 aa18.67■□□□□ 0.58
USP39-205ENST00000442708 OAZ1P54368 228 aa18.67■□□□□ 0.58
USP39-205ENST00000442708 FGD1P98174 961 aa18.67■□□□□ 0.58
USP39-205ENST00000442708 MORN1Q5T089 497 aa18.67■□□□□ 0.58
USP39-205ENST00000442708 WDR78Q5VTH9 848 aa18.67■□□□□ 0.58
USP39-205ENST00000442708 NCAPG2Q86XI2 1143 aa18.67■□□□□ 0.58
USP39-205ENST00000442708 CMTR1Q8N1G2 835 aaKnown RBP18.67■□□□□ 0.58
USP39-205ENST00000442708 SRBD1Q8N5C6 995 aaKnown RBP18.67■□□□□ 0.58
USP39-205ENST00000442708 FANCBQ8NB91 859 aa18.67■□□□□ 0.58
USP39-205ENST00000442708 MTMR8Q96EF0 704 aa18.67■□□□□ 0.58
USP39-205ENST00000442708 MCOLN1Q9GZU1 580 aa18.67■□□□□ 0.58
USP39-205ENST00000442708 FAM217BQ9NTX9 383 aaPredicted RBP18.67■□□□□ 0.58
USP39-205ENST00000442708 PTPN22Q9Y2R2 807 aa18.67■□□□□ 0.58
USP39-205ENST00000442708 CTDP1Q9Y5B0 961 aaPredicted RBP18.67■□□□□ 0.58
USP39-205ENST00000442708 PTCH2Q9Y6C5 1203 aa18.67■□□□□ 0.58
USP39-205ENST00000442708 ZNF236Q9UL36 1845 aa18.67■□□□□ 0.58
USP39-205ENST00000442708 ZBTB43O43298 467 aa18.66■□□□□ 0.58
USP39-205ENST00000442708 SLC25A27O95847 323 aa18.66■□□□□ 0.58
USP39-205ENST00000442708 GNRH1P01148 92 aa18.66■□□□□ 0.58
USP39-205ENST00000442708 ICAM1P05362 532 aa18.66■□□□□ 0.58
USP39-205ENST00000442708 CALM1P0DP23 149 aa18.66■□□□□ 0.58
USP39-205ENST00000442708 CALM2P0DP24 149 aa18.66■□□□□ 0.58
USP39-205ENST00000442708 CALM3P0DP25 149 aa18.66■□□□□ 0.58
USP39-205ENST00000442708 EVCP57679 992 aa18.66■□□□□ 0.58
USP39-205ENST00000442708 CDC37Q16543 378 aaPredicted RBP18.66■□□□□ 0.58
USP39-205ENST00000442708 CCAR1Q8IX12 1150 aaKnown RBP18.66■□□□□ 0.58
USP39-205ENST00000442708 CTCFLQ8NI51 663 aaPredicted RBP18.66■□□□□ 0.58
USP39-205ENST00000442708 USP6NLQ92738 828 aa18.66■□□□□ 0.58
USP39-205ENST00000442708 COA7Q96BR5 231 aa18.66■□□□□ 0.58
USP39-205ENST00000442708 MROH8Q9H579 483 aa18.66■□□□□ 0.58
USP39-205ENST00000442708 RIOX1Q9H6W3 641 aa18.66■□□□□ 0.58
USP39-205ENST00000442708 PPP1R11O60927 126 aaPredicted RBP18.65■□□□□ 0.58
USP39-205ENST00000442708 PTPREP23469 700 aa18.65■□□□□ 0.58
USP39-205ENST00000442708 CDC27P30260 824 aa18.65■□□□□ 0.58
USP39-205ENST00000442708 FLT3LGP49771 235 aa18.65■□□□□ 0.58
USP39-205ENST00000442708 ARHGEF6Q15052 776 aa18.65■□□□□ 0.58
USP39-205ENST00000442708 QRICH1Q2TAL8 776 aa18.65■□□□□ 0.58
USP39-205ENST00000442708 MUM1L1Q5H9M0 696 aa18.65■□□□□ 0.58
USP39-205ENST00000442708 HOMER2Q9NSB8 354 aa18.65■□□□□ 0.58
USP39-205ENST00000442708 CCPG1Q9ULG6 757 aa18.65■□□□□ 0.58
USP39-205ENST00000442708 SLC15A5A6NIM6 579 aa18.64■□□□□ 0.57
USP39-205ENST00000442708 GOLGA8AA7E2F4 631 aa18.64■□□□□ 0.57
USP39-205ENST00000442708 GOLGA8BA8MQT2 603 aa18.64■□□□□ 0.57
USP39-205ENST00000442708 DHX16O60231 1041 aaKnown RBP18.64■□□□□ 0.57
USP39-205ENST00000442708 ALAS1P13196 640 aa18.64■□□□□ 0.57
USP39-205ENST00000442708 PDIA3P30101 505 aaKnown RBP18.64■□□□□ 0.57
USP39-205ENST00000442708 KIF5BP33176 963 aa18.64■□□□□ 0.57
USP39-205ENST00000442708 AK2P54819 239 aa18.64■□□□□ 0.57
USP39-205ENST00000442708 GRB14Q14449 540 aa18.64■□□□□ 0.57
USP39-205ENST00000442708 FBXO46Q6PJ61 603 aaPredicted RBP18.64■□□□□ 0.57
USP39-205ENST00000442708 SYNE3Q6ZMZ3 975 aa18.64■□□□□ 0.57
USP39-205ENST00000442708 TMTC3Q6ZXV5 915 aa18.64■□□□□ 0.57
USP39-205ENST00000442708 TBC1D32Q96NH3 1257 aa18.64■□□□□ 0.57
USP39-205ENST00000442708 PIGSQ96S52 555 aa18.64■□□□□ 0.57
USP39-205ENST00000442708 ALDH8A1Q9H2A2 487 aaPredicted RBP18.64■□□□□ 0.57
USP39-205ENST00000442708 NAP1L2Q9ULW6 460 aaPredicted RBP18.64■□□□□ 0.57
USP39-205ENST00000442708 PLXNA1Q9UIW2 1896 aa18.64■□□□□ 0.57
USP39-205ENST00000442708 LCTP09848 1927 aa18.63■□□□□ 0.57
USP39-205ENST00000442708 HOXD10P28358 340 aa18.63■□□□□ 0.57
USP39-205ENST00000442708 NEK4P51957 841 aa18.63■□□□□ 0.57
USP39-205ENST00000442708 FUT2Q10981 343 aa18.63■□□□□ 0.57
USP39-205ENST00000442708 PKN2Q16513 984 aaKnown RBP18.63■□□□□ 0.57
USP39-205ENST00000442708 RTN1Q16799 776 aa18.63■□□□□ 0.57
USP39-205ENST00000442708 CCDC82Q8N4S0 544 aa18.63■□□□□ 0.57
USP39-205ENST00000442708 PIBF1Q8WXW3 757 aa18.63■□□□□ 0.57
USP39-205ENST00000442708 TRERF1Q96PN7 1200 aa18.63■□□□□ 0.57
USP39-205ENST00000442708 SPZ1Q9BXG8 430 aa18.63■□□□□ 0.57
USP39-205ENST00000442708 CWC22Q9HCG8 908 aaKnown RBP18.63■□□□□ 0.57
USP39-205ENST00000442708 RNF146Q9NTX7 359 aa18.63■□□□□ 0.57
USP39-205ENST00000442708 NID2Q14112 1375 aa18.63■□□□□ 0.57
USP39-205ENST00000442708 COBLO75128 1261 aa18.62■□□□□ 0.57
USP39-205ENST00000442708 ADORA2AP29274 412 aa18.62■□□□□ 0.57
USP39-205ENST00000442708 COPB2P35606 906 aa18.62■□□□□ 0.57
USP39-205ENST00000442708 ADD1P35611 737 aaKnown RBP18.62■□□□□ 0.57
USP39-205ENST00000442708 RGS19P49795 217 aa18.62■□□□□ 0.57
USP39-205ENST00000442708 RCAN1P53805 252 aa18.62■□□□□ 0.57
USP39-205ENST00000442708 PRMT2P55345 433 aa18.62■□□□□ 0.57
USP39-205ENST00000442708 MAP2K5Q13163 448 aa18.62■□□□□ 0.57
USP39-205ENST00000442708 IRF5Q13568 498 aa18.62■□□□□ 0.57
USP39-205ENST00000442708 USH1GQ495M9 461 aa18.62■□□□□ 0.57
USP39-205ENST00000442708 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.62■□□□□ 0.57
USP39-205ENST00000442708 HOMER1Q86YM7 354 aa18.62■□□□□ 0.57
USP39-205ENST00000442708 NPLOC4Q8TAT6 608 aa18.62■□□□□ 0.57
USP39-205ENST00000442708 CLEC4DQ8WXI8 215 aa18.62■□□□□ 0.57
USP39-205ENST00000442708 MMP19Q99542 508 aa18.62■□□□□ 0.57
USP39-205ENST00000442708 NUDT12Q9BQG2 462 aa18.62■□□□□ 0.57
USP39-205ENST00000442708 NCOA5Q9HCD5 579 aaKnown RBP18.62■□□□□ 0.57
USP39-205ENST00000442708 IVNS1ABPQ9Y6Y0 642 aa18.62■□□□□ 0.57
USP39-205ENST00000442708 hCG_1642624A0A1W2PR95 340 aa18.61■□□□□ 0.57
USP39-205ENST00000442708 ZBTB5O15062 677 aa18.61■□□□□ 0.57
USP39-205ENST00000442708 STRNO43815 780 aa18.61■□□□□ 0.57
USP39-205ENST00000442708 PGK2P07205 417 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms