RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 ARHGAP5Q13017 1502 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 ERCC6Q03468 1493 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 KCNA3P22001 575 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 TTC38Q5R3I4 469 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 UNC5CLQ8IV45 518 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 SIRT2Q8IXJ6 389 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 SPZ1Q9BXG8 430 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 PITPNM3Q9BZ71 974 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 CHPF2Q9P2E5 772 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 TXNDC16Q9P2K2 825 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 LRWD1Q9UFC0 647 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 ZRANB2O95218 330 aaKnown RBP eCLIP11.29□□□□□ -0.6
LIN54-202ENST00000442461 CALM1P0DP23 149 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 CALM2P0DP24 149 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 CALM3P0DP25 149 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 RPL13P26373 211 aaKnown RBP11.29□□□□□ -0.6
LIN54-202ENST00000442461 SLCO1A2P46721 670 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 CYP27A1Q02318 531 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 FOXR1Q6PIV2 292 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 PHKBQ93100 1093 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 NUDT16Q96DE0 195 aaKnown RBP11.29□□□□□ -0.6
LIN54-202ENST00000442461 VPS37BQ9H9H4 285 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 PALMDQ9NP74 551 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 TYW1Q9NV66 732 aaKnown RBP11.29□□□□□ -0.6
LIN54-202ENST00000442461 ZNF446Q9NWS9 450 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 MAN1B1Q9UKM7 699 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 TTC21BQ7Z4L5 1316 aa11.28□□□□□ -0.6
LIN54-202ENST00000442461 TMCC1O94876 653 aa11.28□□□□□ -0.6
LIN54-202ENST00000442461 EEF1GP26641 437 aaKnown RBP11.28□□□□□ -0.6
LIN54-202ENST00000442461 ZBED6P86452 979 aa11.28□□□□□ -0.6
LIN54-202ENST00000442461 TMEM132AQ24JP5 1023 aa11.28□□□□□ -0.6
LIN54-202ENST00000442461 LGSNQ5TDP6 509 aa11.28□□□□□ -0.6
LIN54-202ENST00000442461 KSR2Q6VAB6 950 aa11.28□□□□□ -0.6
LIN54-202ENST00000442461 ZKSCAN4Q969J2 545 aaPredicted RBP11.28□□□□□ -0.6
LIN54-202ENST00000442461 CYTH2Q99418 400 aa11.28□□□□□ -0.6
LIN54-202ENST00000442461 GYG2O15488 501 aa11.28□□□□□ -0.6
LIN54-202ENST00000442461 FBLN1P23142 703 aa11.28□□□□□ -0.6
LIN54-202ENST00000442461 SERPINB3P29508 390 aa11.28□□□□□ -0.6
LIN54-202ENST00000442461 GNAQP50148 359 aa11.28□□□□□ -0.6
LIN54-202ENST00000442461 PTGISQ16647 500 aa11.28□□□□□ -0.6
LIN54-202ENST00000442461 GRAMD1BQ3KR37 738 aa11.28□□□□□ -0.6
LIN54-202ENST00000442461 DCAF17Q5H9S7 520 aaPredicted RBP11.28□□□□□ -0.6
LIN54-202ENST00000442461 NOSTRINQ8IVI9 506 aa11.28□□□□□ -0.6
LIN54-202ENST00000442461 NSUN7Q8NE18 718 aaKnown RBP11.28□□□□□ -0.6
LIN54-202ENST00000442461 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.28□□□□□ -0.6
LIN54-202ENST00000442461 MAIP1Q8WWC4 291 aa11.28□□□□□ -0.6
LIN54-202ENST00000442461 KDM5DQ9BY66 1539 aa11.28□□□□□ -0.6
LIN54-202ENST00000442461 SPAG7O75391 227 aa11.28□□□□□ -0.6
LIN54-202ENST00000442461 MOCS3O95396 460 aa11.28□□□□□ -0.6
LIN54-202ENST00000442461 H2AFZP0C0S5 128 aa11.28□□□□□ -0.6
LIN54-202ENST00000442461 MFSD4BQ5TF39 518 aa11.28□□□□□ -0.6
LIN54-202ENST00000442461 H2AFVQ71UI9 128 aa11.28□□□□□ -0.6
LIN54-202ENST00000442461 TXNDC2Q86VQ3 553 aa11.28□□□□□ -0.6
LIN54-202ENST00000442461 SNRNP27Q8WVK2 155 aaKnown RBP11.28□□□□□ -0.6
LIN54-202ENST00000442461 TSPY2A6NKD2 308 aa11.27□□□□□ -0.6
LIN54-202ENST00000442461 CCT8L1PA6NM43 557 aa11.27□□□□□ -0.6
LIN54-202ENST00000442461 SART1O43290 800 aaKnown RBP11.27□□□□□ -0.6
LIN54-202ENST00000442461 GSTA2P09210 222 aa11.27□□□□□ -0.6
LIN54-202ENST00000442461 CNGA1P29973 690 aa11.27□□□□□ -0.6
LIN54-202ENST00000442461 IL15P40933 162 aaPredicted RBP11.27□□□□□ -0.6
LIN54-202ENST00000442461 SEMA3FQ13275 785 aa11.27□□□□□ -0.6
LIN54-202ENST00000442461 SLC9C2Q5TAH2 1124 aa11.27□□□□□ -0.6
LIN54-202ENST00000442461 OLFML2BQ68BL8 750 aa11.27□□□□□ -0.6
LIN54-202ENST00000442461 ZMYND12Q9H0C1 365 aa11.27□□□□□ -0.6
LIN54-202ENST00000442461 RTL9Q8NET4 1388 aa11.27□□□□□ -0.6
LIN54-202ENST00000442461 E7EWF7 191 aa11.27□□□□□ -0.61
LIN54-202ENST00000442461 MGEA5O60502 916 aa11.27□□□□□ -0.61
LIN54-202ENST00000442461 PARP1P09874 1014 aaKnown RBP11.27□□□□□ -0.61
LIN54-202ENST00000442461 C16orf87Q6PH81 154 aa11.27□□□□□ -0.61
LIN54-202ENST00000442461 ZNF444Q8N0Y2 327 aaPredicted RBP11.27□□□□□ -0.61
LIN54-202ENST00000442461 SSH3Q8TE77 659 aa11.27□□□□□ -0.61
LIN54-202ENST00000442461 LRRC37BQ96QE4 947 aa11.27□□□□□ -0.61
LIN54-202ENST00000442461 TUBGCP2Q9BSJ2 902 aa11.27□□□□□ -0.61
LIN54-202ENST00000442461 FGFR1OP2Q9NVK5 253 aa11.27□□□□□ -0.61
LIN54-202ENST00000442461 FAM135AQ9P2D6 1515 aa11.27□□□□□ -0.61
LIN54-202ENST00000442461 GTPBP6O43824 516 aaPredicted RBP11.27□□□□□ -0.61
LIN54-202ENST00000442461 PECAM1P16284 738 aaPredicted RBP11.27□□□□□ -0.61
LIN54-202ENST00000442461 KRT80Q6KB66 452 aa11.27□□□□□ -0.61
LIN54-202ENST00000442461 TTLL7Q6ZT98 887 aa11.27□□□□□ -0.61
LIN54-202ENST00000442461 MSANTD4Q8NCY6 345 aa11.27□□□□□ -0.61
LIN54-202ENST00000442461 PBKQ96KB5 322 aa11.27□□□□□ -0.61
LIN54-202ENST00000442461 TAF1DQ9H5J8 278 aaPredicted RBP11.27□□□□□ -0.61
LIN54-202ENST00000442461 PASKQ96RG2 1323 aa11.27□□□□□ -0.61
LIN54-202ENST00000442461 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.26□□□□□ -0.61
LIN54-202ENST00000442461 MCF2LO15068 1137 aa11.26□□□□□ -0.61
LIN54-202ENST00000442461 NVLO15381 856 aaKnown RBP11.26□□□□□ -0.61
LIN54-202ENST00000442461 RPS6KA5O75582 802 aa11.26□□□□□ -0.61
LIN54-202ENST00000442461 CA8P35219 290 aa11.26□□□□□ -0.61
LIN54-202ENST00000442461 HDLBPQ00341 1268 aaKnown RBP11.26□□□□□ -0.61
LIN54-202ENST00000442461 KIAA0825Q8IV33 1275 aa11.26□□□□□ -0.61
LIN54-202ENST00000442461 FMR1NBQ8N0W7 255 aaPredicted RBP11.26□□□□□ -0.61
LIN54-202ENST00000442461 KLHL23Q8NBE8 558 aa11.26□□□□□ -0.61
LIN54-202ENST00000442461 MYCBPAPQ8TBZ2 947 aa11.26□□□□□ -0.61
LIN54-202ENST00000442461 LZICQ8WZA0 190 aa11.26□□□□□ -0.61
LIN54-202ENST00000442461 EPSTI1Q96J88 318 aa11.26□□□□□ -0.61
LIN54-202ENST00000442461 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.26□□□□□ -0.61
LIN54-202ENST00000442461 NHEJ1Q9H9Q4 299 aaPredicted RBP11.26□□□□□ -0.61
LIN54-202ENST00000442461 LRRIQ3A6PVS8 624 aaPredicted RBP11.26□□□□□ -0.61
LIN54-202ENST00000442461 CCDC188H7C350 402 aa11.26□□□□□ -0.61
LIN54-202ENST00000442461 PTPROQ16827 1216 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms