RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 KCTD2Q14681 263 aa17.55■□□□□ 0.4
CSNK1E-210ENST00000442216 GRM4Q14833 912 aa17.55■□□□□ 0.4
CSNK1E-210ENST00000442216 DPP9Q86TI2 863 aa17.55■□□□□ 0.4
CSNK1E-210ENST00000442216 SGMS1Q86VZ5 419 aa17.55■□□□□ 0.4
CSNK1E-210ENST00000442216 MMP19Q99542 508 aa17.55■□□□□ 0.4
CSNK1E-210ENST00000442216 RIPK3Q9Y572 518 aa17.55■□□□□ 0.4
CSNK1E-210ENST00000442216 DDAH1O94760 285 aa17.54■□□□□ 0.4
CSNK1E-210ENST00000442216 GOLGA8HP0CJ92 632 aa17.54■□□□□ 0.4
CSNK1E-210ENST00000442216 CALM1P0DP23 149 aa17.54■□□□□ 0.4
CSNK1E-210ENST00000442216 CALM2P0DP24 149 aa17.54■□□□□ 0.4
CSNK1E-210ENST00000442216 CALM3P0DP25 149 aa17.54■□□□□ 0.4
CSNK1E-210ENST00000442216 ELNP15502 786 aa17.54■□□□□ 0.4
CSNK1E-210ENST00000442216 PSMA5P28066 241 aa17.54■□□□□ 0.4
CSNK1E-210ENST00000442216 SENP2Q9HC62 589 aa17.54■□□□□ 0.4
CSNK1E-210ENST00000442216 BIN2Q9UBW5 565 aaPredicted RBP17.54■□□□□ 0.4
CSNK1E-210ENST00000442216 MAD2L2Q9UI95 211 aa17.54■□□□□ 0.4
CSNK1E-210ENST00000442216 DIS3Q9Y2L1 958 aaKnown RBP17.54■□□□□ 0.4
CSNK1E-210ENST00000442216 CCDC69A6NI79 296 aa17.53■□□□□ 0.4
CSNK1E-210ENST00000442216 INHAP05111 366 aa17.53■□□□□ 0.4
CSNK1E-210ENST00000442216 COL9A3Q14050 684 aaPredicted RBP17.53■□□□□ 0.4
CSNK1E-210ENST00000442216 ZNF654Q8IZM8 581 aa17.53■□□□□ 0.4
CSNK1E-210ENST00000442216 TRIB2Q92519 343 aa17.53■□□□□ 0.4
CSNK1E-210ENST00000442216 AGBL1Q96MI9 1066 aa17.53■□□□□ 0.4
CSNK1E-210ENST00000442216 TMEM106CQ9BVX2 250 aa17.53■□□□□ 0.4
CSNK1E-210ENST00000442216 UBA5Q9GZZ9 404 aa17.53■□□□□ 0.4
CSNK1E-210ENST00000442216 ACAD9Q9H845 621 aa17.53■□□□□ 0.4
CSNK1E-210ENST00000442216 CCPG1Q9ULG6 757 aa17.53■□□□□ 0.4
CSNK1E-210ENST00000442216 KIAA0100Q14667 2235 aaKnown RBP17.52■□□□□ 0.4
CSNK1E-210ENST00000442216 BAZ2BQ9UIF8 2168 aaKnown RBP17.52■□□□□ 0.4
CSNK1E-210ENST00000442216 KLRF2D3W0D1 207 aa17.52■□□□□ 0.4
CSNK1E-210ENST00000442216 IGHA2P01877 340 aa17.52■□□□□ 0.4
CSNK1E-210ENST00000442216 CAPN2P17655 700 aa17.52■□□□□ 0.4
CSNK1E-210ENST00000442216 OLFML2BQ68BL8 750 aa17.52■□□□□ 0.4
CSNK1E-210ENST00000442216 CCDC174Q6PII3 467 aa17.52■□□□□ 0.4
CSNK1E-210ENST00000442216 BLOC1S2Q6QNY1 142 aa17.52■□□□□ 0.4
CSNK1E-210ENST00000442216 NFXL1Q6ZNB6 911 aa17.52■□□□□ 0.4
CSNK1E-210ENST00000442216 ADGRF4Q8IZF3 695 aa17.52■□□□□ 0.4
CSNK1E-210ENST00000442216 STAG2Q8N3U4 1231 aa17.52■□□□□ 0.4
CSNK1E-210ENST00000442216 FBXL16Q8N461 479 aa17.52■□□□□ 0.4
CSNK1E-210ENST00000442216 NPLOC4Q8TAT6 608 aa17.52■□□□□ 0.4
CSNK1E-210ENST00000442216 JAKMIP1Q96N16 626 aaKnown RBP17.52■□□□□ 0.4
CSNK1E-210ENST00000442216 TRERF1Q96PN7 1200 aa17.52■□□□□ 0.4
CSNK1E-210ENST00000442216 MAF1Q9H063 256 aa17.52■□□□□ 0.4
CSNK1E-210ENST00000442216 RNF146Q9NTX7 359 aa17.52■□□□□ 0.4
CSNK1E-210ENST00000442216 HTTP42858 3142 aa17.52■□□□□ 0.39
CSNK1E-210ENST00000442216 DNAJC25-GNG10A0A024R161 153 aa17.51■□□□□ 0.39
CSNK1E-210ENST00000442216 COBLO75128 1261 aa17.51■□□□□ 0.39
CSNK1E-210ENST00000442216 ALAS1P13196 640 aa17.51■□□□□ 0.39
CSNK1E-210ENST00000442216 SMARCA1P28370 1054 aa17.51■□□□□ 0.39
CSNK1E-210ENST00000442216 KIF5BP33176 963 aa17.51■□□□□ 0.39
CSNK1E-210ENST00000442216 SLC4A3P48751 1232 aa17.51■□□□□ 0.39
CSNK1E-210ENST00000442216 SNAP25P60880 206 aa17.51■□□□□ 0.39
CSNK1E-210ENST00000442216 MAP3K21Q5TCX8 1036 aa17.51■□□□□ 0.39
CSNK1E-210ENST00000442216 CTCFLQ8NI51 663 aaPredicted RBP17.51■□□□□ 0.39
CSNK1E-210ENST00000442216 MTMR8Q96EF0 704 aa17.51■□□□□ 0.39
CSNK1E-210ENST00000442216 DDX11Q96FC9 970 aa17.51■□□□□ 0.39
CSNK1E-210ENST00000442216 TM6SF1Q9BZW5 370 aa17.51■□□□□ 0.39
CSNK1E-210ENST00000442216 RIOX1Q9H6W3 641 aa17.51■□□□□ 0.39
CSNK1E-210ENST00000442216 GPHNQ9NQX3 736 aaPredicted RBP17.51■□□□□ 0.39
CSNK1E-210ENST00000442216 SLC12A7Q9Y666 1083 aa17.51■□□□□ 0.39
CSNK1E-210ENST00000442216 PFASO15067 1338 aa17.5■□□□□ 0.39
CSNK1E-210ENST00000442216 RPTORQ8N122 1335 aa17.5■□□□□ 0.39
CSNK1E-210ENST00000442216 CCL5P13501 91 aa17.5■□□□□ 0.39
CSNK1E-210ENST00000442216 GNAQP50148 359 aa17.5■□□□□ 0.39
CSNK1E-210ENST00000442216 MTFR1Q15390 333 aa17.5■□□□□ 0.39
CSNK1E-210ENST00000442216 CDC37Q16543 378 aaPredicted RBP17.5■□□□□ 0.39
CSNK1E-210ENST00000442216 CCL14Q16627 93 aa17.5■□□□□ 0.39
CSNK1E-210ENST00000442216 ZNF792Q3KQV3 632 aa17.5■□□□□ 0.39
CSNK1E-210ENST00000442216 MFSD14CQ5VZR4 134 aa17.5■□□□□ 0.39
CSNK1E-210ENST00000442216 SYNE3Q6ZMZ3 975 aa17.5■□□□□ 0.39
CSNK1E-210ENST00000442216 ANKRD35Q8N283 1001 aa17.5■□□□□ 0.39
CSNK1E-210ENST00000442216 MSL3Q8N5Y2 521 aaKnown RBP17.5■□□□□ 0.39
CSNK1E-210ENST00000442216 NUP133Q8WUM0 1156 aa17.5■□□□□ 0.39
CSNK1E-210ENST00000442216 MAML3Q96JK9 1138 aa17.5■□□□□ 0.39
CSNK1E-210ENST00000442216 LZTS2Q9BRK4 669 aa17.5■□□□□ 0.39
CSNK1E-210ENST00000442216 LRRC2Q9BYS8 371 aa17.5■□□□□ 0.39
CSNK1E-210ENST00000442216 CPVLQ9H3G5 476 aa17.5■□□□□ 0.39
CSNK1E-210ENST00000442216 JMJD4Q9H9V9 463 aa17.5■□□□□ 0.39
CSNK1E-210ENST00000442216 LCTP09848 1927 aa17.49■□□□□ 0.39
CSNK1E-210ENST00000442216 DHX16O60231 1041 aaKnown RBP17.49■□□□□ 0.39
CSNK1E-210ENST00000442216 RPS6KB1P23443 525 aa17.49■□□□□ 0.39
CSNK1E-210ENST00000442216 RCAN1P53805 252 aa17.49■□□□□ 0.39
CSNK1E-210ENST00000442216 ANAPC15P60006 121 aa17.49■□□□□ 0.39
CSNK1E-210ENST00000442216 ZNF467Q7Z7K2 595 aaPredicted RBP17.49■□□□□ 0.39
CSNK1E-210ENST00000442216 AGXT2Q9BYV1 514 aa17.49■□□□□ 0.39
CSNK1E-210ENST00000442216 RNF208Q9H0X6 261 aa17.49■□□□□ 0.39
CSNK1E-210ENST00000442216 ZSWIM6Q9HCJ5 1215 aa17.49■□□□□ 0.39
CSNK1E-210ENST00000442216 HMX1Q9NP08 348 aaPredicted RBP17.49■□□□□ 0.39
CSNK1E-210ENST00000442216 HOMER2Q9NSB8 354 aa17.49■□□□□ 0.39
CSNK1E-210ENST00000442216 FLRT1Q9NZU1 646 aa17.49■□□□□ 0.39
CSNK1E-210ENST00000442216 MCM3APO60318 1980 aa17.49■□□□□ 0.39
CSNK1E-210ENST00000442216 CAPN15O75808 1086 aa17.48■□□□□ 0.39
CSNK1E-210ENST00000442216 PGK2P07205 417 aa17.48■□□□□ 0.39
CSNK1E-210ENST00000442216 GJB1P08034 283 aa17.48■□□□□ 0.39
CSNK1E-210ENST00000442216 PRKAR2AP13861 404 aaKnown RBP17.48■□□□□ 0.39
CSNK1E-210ENST00000442216 CASTP20810 708 aaKnown RBP17.48■□□□□ 0.39
CSNK1E-210ENST00000442216 RGS19P49795 217 aa17.48■□□□□ 0.39
CSNK1E-210ENST00000442216 TRAF1Q13077 416 aa17.48■□□□□ 0.39
CSNK1E-210ENST00000442216 QRICH1Q2TAL8 776 aa17.48■□□□□ 0.39
CSNK1E-210ENST00000442216 APOA5Q6Q788 366 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms