RNA–Protein interactions for RNA: ENST00000441730.2

BRPF3-204, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 3,329 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-204ENST00000441730 SPC24Q8NBT2 197 aa11.7□□□□□ -0.54
BRPF3-204ENST00000441730 ZNF512BQ96KM6 892 aaPredicted RBP11.7□□□□□ -0.54
BRPF3-204ENST00000441730 KIF9Q9HAQ2 790 aa11.7□□□□□ -0.54
BRPF3-204ENST00000441730 DDX4Q9NQI0 724 aaKnown RBP11.7□□□□□ -0.54
BRPF3-204ENST00000441730 TBC1D7Q9P0N9 293 aa11.7□□□□□ -0.54
BRPF3-204ENST00000441730 MRFAP1Q9Y605 127 aa11.7□□□□□ -0.54
BRPF3-204ENST00000441730 VIL1P09327 827 aaKnown RBP11.7□□□□□ -0.54
BRPF3-204ENST00000441730 MYSM1Q5VVJ2 828 aa11.7□□□□□ -0.54
BRPF3-204ENST00000441730 ARMC9Q7Z3E5 817 aa11.7□□□□□ -0.54
BRPF3-204ENST00000441730 TRIM11Q96F44 468 aa11.7□□□□□ -0.54
BRPF3-204ENST00000441730 CSRNP1Q96S65 589 aa11.7□□□□□ -0.54
BRPF3-204ENST00000441730 EPB41L4AQ9HCS5 686 aaPredicted RBP11.7□□□□□ -0.54
BRPF3-204ENST00000441730 U3KPZ7 1027 aaPredicted RBP11.7□□□□□ -0.54
BRPF3-204ENST00000441730 COL11A2P13942 1736 aaPredicted RBP11.69□□□□□ -0.54
BRPF3-204ENST00000441730 TCRBV5S4A2TA0A5A2 114 aa11.69□□□□□ -0.54
BRPF3-204ENST00000441730 TSPY2A6NKD2 308 aa11.69□□□□□ -0.54
BRPF3-204ENST00000441730 GDF11O95390 407 aa11.69□□□□□ -0.54
BRPF3-204ENST00000441730 IQCB1Q15051 598 aa11.69□□□□□ -0.54
BRPF3-204ENST00000441730 APOBEC3HQ6NTF7 200 aaKnown RBP11.69□□□□□ -0.54
BRPF3-204ENST00000441730 MFSD6Q6ZSS7 791 aa11.69□□□□□ -0.54
BRPF3-204ENST00000441730 TMEM110Q86TL2 294 aa11.69□□□□□ -0.54
BRPF3-204ENST00000441730 MYOCDQ8IZQ8 938 aa11.69□□□□□ -0.54
BRPF3-204ENST00000441730 TRIML1Q8N9V2 468 aa11.69□□□□□ -0.54
BRPF3-204ENST00000441730 MORC4Q8TE76 937 aa11.69□□□□□ -0.54
BRPF3-204ENST00000441730 NUP133Q8WUM0 1156 aa11.69□□□□□ -0.54
BRPF3-204ENST00000441730 RSPH1Q8WYR4 309 aa11.69□□□□□ -0.54
BRPF3-204ENST00000441730 ZBTB10Q96DT7 871 aa11.69□□□□□ -0.54
BRPF3-204ENST00000441730 SPATA32Q96LK8 384 aa11.69□□□□□ -0.54
BRPF3-204ENST00000441730 DCP1AQ9NPI6 582 aaPredicted RBP11.69□□□□□ -0.54
BRPF3-204ENST00000441730 FAM205AQ6ZU69 1335 aa11.69□□□□□ -0.54
BRPF3-204ENST00000441730 CREB3O43889 395 aa11.69□□□□□ -0.54
BRPF3-204ENST00000441730 RTN3O95197 1032 aaPredicted RBP11.69□□□□□ -0.54
BRPF3-204ENST00000441730 CYP11B2P19099 503 aa11.69□□□□□ -0.54
BRPF3-204ENST00000441730 RANBP1P43487 201 aa11.69□□□□□ -0.54
BRPF3-204ENST00000441730 MKRN3Q13064 507 aaKnown RBP11.69□□□□□ -0.54
BRPF3-204ENST00000441730 CAVIN1Q6NZI2 390 aaKnown RBP11.69□□□□□ -0.54
BRPF3-204ENST00000441730 BLOC1S2Q6QNY1 142 aa11.69□□□□□ -0.54
BRPF3-204ENST00000441730 KIAA1328Q86T90 577 aa11.69□□□□□ -0.54
BRPF3-204ENST00000441730 FAM107BQ9H098 131 aa11.69□□□□□ -0.54
BRPF3-204ENST00000441730 METTL14Q9HCE5 456 aaKnown RBP11.69□□□□□ -0.54
BRPF3-204ENST00000441730 POLR3GO15318 223 aaPredicted RBP11.68□□□□□ -0.54
BRPF3-204ENST00000441730 HNRNPH1P31943 449 aaKnown RBP11.68□□□□□ -0.54
BRPF3-204ENST00000441730 SAPCD2Q86UD0 394 aa11.68□□□□□ -0.54
BRPF3-204ENST00000441730 ZNF444Q8N0Y2 327 aaPredicted RBP11.68□□□□□ -0.54
BRPF3-204ENST00000441730 TCP11Q8WWU5 503 aa11.68□□□□□ -0.54
BRPF3-204ENST00000441730 BHMTQ93088 406 aa11.68□□□□□ -0.54
BRPF3-204ENST00000441730 EXOC4Q96A65 974 aa11.68□□□□□ -0.54
BRPF3-204ENST00000441730 DUSP9Q99956 384 aaKnown RBP11.68□□□□□ -0.54
BRPF3-204ENST00000441730 JPH2Q9BR39 696 aaPredicted RBP11.68□□□□□ -0.54
BRPF3-204ENST00000441730 RIOK1Q9BRS2 568 aaKnown RBP11.68□□□□□ -0.54
BRPF3-204ENST00000441730 MMADHCQ9H3L0 296 aaPredicted RBP11.68□□□□□ -0.54
BRPF3-204ENST00000441730 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.68□□□□□ -0.54
BRPF3-204ENST00000441730 HACL1Q9UJ83 578 aa11.68□□□□□ -0.54
BRPF3-204ENST00000441730 COL24A1Q17RW2 1714 aa11.68□□□□□ -0.54
BRPF3-204ENST00000441730 IRS2Q9Y4H2 1338 aa11.68□□□□□ -0.54
BRPF3-204ENST00000441730 LAMB2P55268 1798 aa11.68□□□□□ -0.54
BRPF3-204ENST00000441730 LAMB3Q13751 1172 aa11.68□□□□□ -0.54
BRPF3-204ENST00000441730 LRSAM1Q6UWE0 723 aa11.68□□□□□ -0.54
BRPF3-204ENST00000441730 C15orf52Q6ZUT6 534 aaKnown RBP11.68□□□□□ -0.54
BRPF3-204ENST00000441730 CCDC80Q76M96 950 aa11.68□□□□□ -0.54
BRPF3-204ENST00000441730 KIAA1524Q8TCG1 905 aa11.68□□□□□ -0.54
BRPF3-204ENST00000441730 B4GALNT2Q8NHY0 566 aa11.68□□□□□ -0.54
BRPF3-204ENST00000441730 MIPOL1Q8TD10 442 aa11.68□□□□□ -0.54
BRPF3-204ENST00000441730 MYL10Q9BUA6 226 aa11.68□□□□□ -0.54
BRPF3-204ENST00000441730 TTC12Q9H892 705 aaPredicted RBP11.68□□□□□ -0.54
BRPF3-204ENST00000441730 CLIP2Q9UDT6 1046 aa11.68□□□□□ -0.54
BRPF3-204ENST00000441730 SNX14Q9Y5W7 946 aa11.68□□□□□ -0.54
BRPF3-204ENST00000441730 NMT2O60551 498 aa11.67□□□□□ -0.54
BRPF3-204ENST00000441730 E2F6O75461 281 aa11.67□□□□□ -0.54
BRPF3-204ENST00000441730 PPARAQ07869 468 aa11.67□□□□□ -0.54
BRPF3-204ENST00000441730 PREPLQ4J6C6 727 aaPredicted RBP11.67□□□□□ -0.54
BRPF3-204ENST00000441730 SULF1Q8IWU6 871 aa11.67□□□□□ -0.54
BRPF3-204ENST00000441730 UHMK1Q8TAS1 419 aaKnown RBP11.67□□□□□ -0.54
BRPF3-204ENST00000441730 MAP4K1Q92918 833 aa11.67□□□□□ -0.54
BRPF3-204ENST00000441730 TRPV5Q9NQA5 729 aa11.67□□□□□ -0.54
BRPF3-204ENST00000441730 HOMER3Q9NSC5 361 aa11.67□□□□□ -0.54
BRPF3-204ENST00000441730 ZNF70Q9UC06 446 aaPredicted RBP11.67□□□□□ -0.54
BRPF3-204ENST00000441730 USP25Q9UHP3 1055 aa11.67□□□□□ -0.54
BRPF3-204ENST00000441730 DDTLA6NHG4 134 aaPredicted RBP11.67□□□□□ -0.54
BRPF3-204ENST00000441730 SPDYE2BA6NHP3 402 aa11.67□□□□□ -0.54
BRPF3-204ENST00000441730 FZD9O00144 591 aa11.67□□□□□ -0.54
BRPF3-204ENST00000441730 HLA-DOAP06340 250 aa11.67□□□□□ -0.54
BRPF3-204ENST00000441730 SPDYE6P0CI01 402 aa11.67□□□□□ -0.54
BRPF3-204ENST00000441730 PLCG2P16885 1265 aa11.67□□□□□ -0.54
BRPF3-204ENST00000441730 GJC2Q5T442 439 aaPredicted RBP11.67□□□□□ -0.54
BRPF3-204ENST00000441730 KRT26Q7Z3Y9 468 aa11.67□□□□□ -0.54
BRPF3-204ENST00000441730 FAM114A1Q8IWE2 563 aa11.67□□□□□ -0.54
BRPF3-204ENST00000441730 DCPSQ96C86 337 aaKnown RBP11.67□□□□□ -0.54
BRPF3-204ENST00000441730 NEK1Q96PY6 1258 aa11.67□□□□□ -0.54
BRPF3-204ENST00000441730 PDRG1Q9NUG6 133 aa11.67□□□□□ -0.54
BRPF3-204ENST00000441730 GPRC5DQ9NZD1 345 aa11.67□□□□□ -0.54
BRPF3-204ENST00000441730 RGPD3A6NKT7 1758 aaPredicted RBP11.67□□□□□ -0.54
BRPF3-204ENST00000441730 RGPD4Q7Z3J3 1758 aa11.67□□□□□ -0.54
BRPF3-204ENST00000441730 ADM5C9JUS6 153 aa11.66□□□□□ -0.54
BRPF3-204ENST00000441730 EPHX2P34913 555 aa11.66□□□□□ -0.54
BRPF3-204ENST00000441730 PLA2G4AP47712 749 aa11.66□□□□□ -0.54
BRPF3-204ENST00000441730 SHROOM1Q2M3G4 852 aaPredicted RBP11.66□□□□□ -0.54
BRPF3-204ENST00000441730 USP48Q86UV5 1035 aa11.66□□□□□ -0.54
BRPF3-204ENST00000441730 ANKRD13BQ86YJ7 626 aa11.66□□□□□ -0.54
BRPF3-204ENST00000441730 GPC2Q8N158 579 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms