RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 CCDC86Q9H6F5 360 aaKnown RBP7.87□□□□□ -1.15
CHD6-204ENST00000440647 KRT82Q9NSB4 513 aa7.87□□□□□ -1.15
CHD6-204ENST00000440647 ACTL7BQ9Y614 415 aa7.87□□□□□ -1.15
CHD6-204ENST00000440647 KCPQ6ZWJ8 1503 aa7.87□□□□□ -1.15
CHD6-204ENST00000440647 DLEC1Q9Y238 1755 aa7.87□□□□□ -1.15
CHD6-204ENST00000440647 SOS1Q07889 1333 aaPredicted RBP7.86□□□□□ -1.15
CHD6-204ENST00000440647 U2SURPO15042 1029 aaKnown RBP7.86□□□□□ -1.15
CHD6-204ENST00000440647 LIG1P18858 919 aa7.86□□□□□ -1.15
CHD6-204ENST00000440647 RBM25P49756 843 aaKnown RBP7.86□□□□□ -1.15
CHD6-204ENST00000440647 FGD1P98174 961 aa7.86□□□□□ -1.15
CHD6-204ENST00000440647 DDR1Q08345 913 aa7.86□□□□□ -1.15
CHD6-204ENST00000440647 TEFQ10587 303 aa7.86□□□□□ -1.15
CHD6-204ENST00000440647 NFKBIBQ15653 356 aa7.86□□□□□ -1.15
CHD6-204ENST00000440647 MTHFSDQ2M296 383 aaKnown RBP7.86□□□□□ -1.15
CHD6-204ENST00000440647 C9orf131Q5VYM1 1079 aa7.86□□□□□ -1.15
CHD6-204ENST00000440647 ZDHHC13Q8IUH4 622 aa7.86□□□□□ -1.15
CHD6-204ENST00000440647 UBE2Q2Q8WVN8 375 aa7.86□□□□□ -1.15
CHD6-204ENST00000440647 EZH1Q92800 747 aaPredicted RBP7.86□□□□□ -1.15
CHD6-204ENST00000440647 NECAB3Q96P71 396 aaPredicted RBP7.86□□□□□ -1.15
CHD6-204ENST00000440647 YIPF2Q9BWQ6 316 aa7.86□□□□□ -1.15
CHD6-204ENST00000440647 ZC3H12CQ9C0D7 883 aaKnown RBP7.86□□□□□ -1.15
CHD6-204ENST00000440647 GSX1Q9H4S2 264 aaPredicted RBP7.86□□□□□ -1.15
CHD6-204ENST00000440647 C12orf49Q9H741 205 aa7.86□□□□□ -1.15
CHD6-204ENST00000440647 LGR6Q9HBX8 967 aa7.86□□□□□ -1.15
CHD6-204ENST00000440647 NRXN2Q9P2S2 1712 aa7.86□□□□□ -1.15
CHD6-204ENST00000440647 KDM2BQ8NHM5 1336 aa7.85□□□□□ -1.15
CHD6-204ENST00000440647 SIPA1L3O60292 1781 aaPredicted RBP7.85□□□□□ -1.15
CHD6-204ENST00000440647 POLRMTO00411 1230 aaKnown RBP7.85□□□□□ -1.15
CHD6-204ENST00000440647 TOMM70O94826 608 aa7.85□□□□□ -1.15
CHD6-204ENST00000440647 STARD3NLO95772 234 aa7.85□□□□□ -1.15
CHD6-204ENST00000440647 SLFN14P0C7P3 912 aa7.85□□□□□ -1.15
CHD6-204ENST00000440647 CYP19A1P11511 503 aaPredicted RBP7.85□□□□□ -1.15
CHD6-204ENST00000440647 NME2P22392 152 aa7.85□□□□□ -1.15
CHD6-204ENST00000440647 ARNTP27540 789 aa7.85□□□□□ -1.15
CHD6-204ENST00000440647 CHRNA5P30532 468 aa7.85□□□□□ -1.15
CHD6-204ENST00000440647 HNRNPUQ00839 825 aaKnown RBP eCLIP7.85□□□□□ -1.15
CHD6-204ENST00000440647 PAOXQ6QHF9 649 aa7.85□□□□□ -1.15
CHD6-204ENST00000440647 PDZD3Q86UT5 571 aa7.85□□□□□ -1.15
CHD6-204ENST00000440647 SULF2Q8IWU5 870 aa7.85□□□□□ -1.15
CHD6-204ENST00000440647 CEP44Q9C0F1 390 aa7.85□□□□□ -1.15
CHD6-204ENST00000440647 RNF181Q9P0P0 153 aa7.85□□□□□ -1.15
CHD6-204ENST00000440647 FAM8A1Q9UBU6 413 aa7.85□□□□□ -1.15
CHD6-204ENST00000440647 NARFQ9UHQ1 456 aa7.85□□□□□ -1.15
CHD6-204ENST00000440647 PPM1HQ9ULR3 514 aa7.85□□□□□ -1.15
CHD6-204ENST00000440647 ZBTB1Q9Y2K1 713 aa7.85□□□□□ -1.15
CHD6-204ENST00000440647 TIAM2Q8IVF5 1701 aa7.85□□□□□ -1.15
CHD6-204ENST00000440647 WDR90Q96KV7 1748 aa7.85□□□□□ -1.15
CHD6-204ENST00000440647 SCN7AQ01118 1682 aa7.85□□□□□ -1.15
CHD6-204ENST00000440647 SBF1O95248 1867 aa7.85□□□□□ -1.15
CHD6-204ENST00000440647 A0A087WZG4 1122 aa7.84□□□□□ -1.15
CHD6-204ENST00000440647 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.84□□□□□ -1.15
CHD6-204ENST00000440647 E9PSI1 815 aa7.84□□□□□ -1.15
CHD6-204ENST00000440647 PRPF40AO75400 957 aaKnown RBP7.84□□□□□ -1.15
CHD6-204ENST00000440647 KCNA3P22001 575 aa7.84□□□□□ -1.15
CHD6-204ENST00000440647 CANXP27824 592 aaKnown RBP7.84□□□□□ -1.15
CHD6-204ENST00000440647 TM4SF1P30408 202 aa7.84□□□□□ -1.15
CHD6-204ENST00000440647 ASPAP45381 313 aa7.84□□□□□ -1.15
CHD6-204ENST00000440647 MFAP1P55081 439 aaKnown RBP7.84□□□□□ -1.15
CHD6-204ENST00000440647 GP2P55259 537 aaKnown RBP7.84□□□□□ -1.15
CHD6-204ENST00000440647 EAPPQ56P03 285 aaPredicted RBP7.84□□□□□ -1.15
CHD6-204ENST00000440647 SHKBP1Q8TBC3 707 aa7.84□□□□□ -1.15
CHD6-204ENST00000440647 STK35Q8TDR2 534 aa7.84□□□□□ -1.15
CHD6-204ENST00000440647 KCNB2Q92953 911 aa7.84□□□□□ -1.15
CHD6-204ENST00000440647 WDR89Q96FK6 387 aaPredicted RBP7.84□□□□□ -1.15
CHD6-204ENST00000440647 CFAP53Q96M91 514 aa7.84□□□□□ -1.15
CHD6-204ENST00000440647 EMILIN2Q9BXX0 1053 aa7.84□□□□□ -1.15
CHD6-204ENST00000440647 GOLGA2P5Q9HBQ8 144 aa7.84□□□□□ -1.15
CHD6-204ENST00000440647 NMRK2Q9NPI5 230 aa7.84□□□□□ -1.15
CHD6-204ENST00000440647 PPP1R9AQ9ULJ8 1098 aa7.84□□□□□ -1.15
CHD6-204ENST00000440647 AP4E1Q9UPM8 1137 aa7.84□□□□□ -1.15
CHD6-204ENST00000440647 CACNA1SQ13698 1873 aa7.83□□□□□ -1.16
CHD6-204ENST00000440647 CCDC88AQ3V6T2 1871 aa7.83□□□□□ -1.16
CHD6-204ENST00000440647 COL3A1P02461 1466 aaPredicted RBP7.83□□□□□ -1.16
CHD6-204ENST00000440647 PRR19A6NJB7 356 aa7.83□□□□□ -1.16
CHD6-204ENST00000440647 GNAT3A8MTJ3 354 aa7.83□□□□□ -1.16
CHD6-204ENST00000440647 NPHP1O15259 732 aa7.83□□□□□ -1.16
CHD6-204ENST00000440647 ZNF862O60290 1169 aa7.83□□□□□ -1.16
CHD6-204ENST00000440647 SERPINB2P05120 415 aa7.83□□□□□ -1.16
CHD6-204ENST00000440647 GNA15P30679 374 aa7.83□□□□□ -1.16
CHD6-204ENST00000440647 MAP7Q14244 749 aa7.83□□□□□ -1.16
CHD6-204ENST00000440647 NFIXQ14938 502 aa7.83□□□□□ -1.16
CHD6-204ENST00000440647 KIF4BQ2VIQ3 1234 aa7.83□□□□□ -1.16
CHD6-204ENST00000440647 TPTE2Q6XPS3 522 aa7.83□□□□□ -1.16
CHD6-204ENST00000440647 DNAJC14Q6Y2X3 702 aaPredicted RBP7.83□□□□□ -1.16
CHD6-204ENST00000440647 MFSD14AQ96MC6 490 aa7.83□□□□□ -1.16
CHD6-204ENST00000440647 TEX13AQ9BXU3 409 aaPredicted RBP7.83□□□□□ -1.16
CHD6-204ENST00000440647 FAM105AQ9NUU6 356 aa7.83□□□□□ -1.16
CHD6-204ENST00000440647 NPC1L1Q9UHC9 1359 aa7.83□□□□□ -1.16
CHD6-204ENST00000440647 BCORQ6W2J9 1755 aa7.82□□□□□ -1.16
CHD6-204ENST00000440647 WDR64B1ANS9 1081 aa7.82□□□□□ -1.16
CHD6-204ENST00000440647 H0YIN7 160 aa7.82□□□□□ -1.16
CHD6-204ENST00000440647 ENC1O14682 589 aa7.82□□□□□ -1.16
CHD6-204ENST00000440647 TMPRSS2O15393 492 aa7.82□□□□□ -1.16
CHD6-204ENST00000440647 MED26O95402 600 aa7.82□□□□□ -1.16
CHD6-204ENST00000440647 WNT11O96014 354 aa7.82□□□□□ -1.16
CHD6-204ENST00000440647 NFICP08651 508 aa7.82□□□□□ -1.16
CHD6-204ENST00000440647 USP17L7P0C7H9 530 aa7.82□□□□□ -1.16
CHD6-204ENST00000440647 ZNF790Q6PG37 636 aa7.82□□□□□ -1.16
CHD6-204ENST00000440647 C2CD5Q86YS7 1000 aa7.82□□□□□ -1.16
CHD6-204ENST00000440647 TTLL6Q8N841 843 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms