RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 ANKRD35Q8N283 1001 aa28.17■■■□□ 2.1
CPNE1-217ENST00000439669 ANKS1AQ92625 1134 aa28.17■■■□□ 2.1
CPNE1-217ENST00000439669 ACAD9Q9H845 621 aa28.17■■■□□ 2.1
CPNE1-217ENST00000439669 OGDHLQ9ULD0 1010 aa28.17■■■□□ 2.1
CPNE1-217ENST00000439669 DIS3Q9Y2L1 958 aaKnown RBP28.17■■■□□ 2.1
CPNE1-217ENST00000439669 CYB5R4Q7L1T6 521 aa28.16■■■□□ 2.1
CPNE1-217ENST00000439669 ANKLE1Q8NAG6 615 aa28.16■■■□□ 2.1
CPNE1-217ENST00000439669 TRPV1Q8NER1 839 aa28.16■■■□□ 2.1
CPNE1-217ENST00000439669 CCPG1Q9ULG6 757 aa28.16■■■□□ 2.1
CPNE1-217ENST00000439669 TAF6LQ9Y6J9 622 aa28.16■■■□□ 2.1
CPNE1-217ENST00000439669 TNRC18O15417 2968 aaPredicted RBP28.15■■■□□ 2.1
CPNE1-217ENST00000439669 PLXNA1Q9UIW2 1896 aa28.15■■■□□ 2.1
CPNE1-217ENST00000439669 E7EWF7 191 aa28.15■■■□□ 2.1
CPNE1-217ENST00000439669 TKFCQ3LXA3 575 aa28.15■■■□□ 2.1
CPNE1-217ENST00000439669 GPATCH4Q5T3I0 446 aaKnown RBP28.15■■■□□ 2.1
CPNE1-217ENST00000439669 IFIT1BQ5T764 474 aaKnown RBP28.15■■■□□ 2.1
CPNE1-217ENST00000439669 PRPF38BQ5VTL8 546 aaKnown RBP28.15■■■□□ 2.1
CPNE1-217ENST00000439669 CASC1Q6TDU7 716 aa28.15■■■□□ 2.1
CPNE1-217ENST00000439669 NCOA7Q8NI08 942 aa28.15■■■□□ 2.1
CPNE1-217ENST00000439669 DIS3LQ8TF46 1054 aaKnown RBP28.15■■■□□ 2.1
CPNE1-217ENST00000439669 HTATIP2Q9BUP3 242 aa28.15■■■□□ 2.1
CPNE1-217ENST00000439669 LSG1Q9H089 658 aaKnown RBP28.15■■■□□ 2.1
CPNE1-217ENST00000439669 RANBP17Q9H2T7 1088 aaKnown RBP28.15■■■□□ 2.1
CPNE1-217ENST00000439669 ANO2Q9NQ90 1003 aa28.15■■■□□ 2.1
CPNE1-217ENST00000439669 DDX20Q9UHI6 824 aaKnown RBP28.15■■■□□ 2.1
CPNE1-217ENST00000439669 GOLGA8HP0CJ92 632 aa28.14■■■□□ 2.1
CPNE1-217ENST00000439669 PRAMEF19Q5SWL8 479 aa28.14■■■□□ 2.1
CPNE1-217ENST00000439669 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.14■■■□□ 2.13e-8■□□□□ 9.3
CPNE1-217ENST00000439669 PAWRQ96IZ0 340 aaKnown RBP28.14■■■□□ 2.1
CPNE1-217ENST00000439669 TRERF1Q96PN7 1200 aa28.14■■■□□ 2.1
CPNE1-217ENST00000439669 DNAJC25-GNG10A0A024R161 153 aa28.13■■■□□ 2.09
CPNE1-217ENST00000439669 MSCO60682 206 aa28.13■■■□□ 2.09
CPNE1-217ENST00000439669 CDC45O75419 566 aa28.13■■■□□ 2.09
CPNE1-217ENST00000439669 ICAM1P05362 532 aa28.13■■■□□ 2.09
CPNE1-217ENST00000439669 LHX8Q68G74 356 aa28.13■■■□□ 2.09
CPNE1-217ENST00000439669 STOX1Q6ZVD7 989 aa28.13■■■□□ 2.09
CPNE1-217ENST00000439669 NECAB2Q7Z6G3 386 aa28.13■■■□□ 2.09
CPNE1-217ENST00000439669 TINF2Q9BSI4 451 aa28.13■■■□□ 2.09
CPNE1-217ENST00000439669 TAL1P17542 331 aaPredicted RBP28.12■■■□□ 2.09
CPNE1-217ENST00000439669 DPF3Q92784 378 aa28.12■■■□□ 2.09
CPNE1-217ENST00000439669 ERICH2A1L162 156 aa28.11■■■□□ 2.09
CPNE1-217ENST00000439669 IFIT3O14879 490 aaKnown RBP28.11■■■□□ 2.09
CPNE1-217ENST00000439669 SEC23AQ15436 765 aa28.11■■■□□ 2.09
CPNE1-217ENST00000439669 A1CFQ9NQ94 594 aaKnown RBP28.11■■■□□ 2.09
CPNE1-217ENST00000439669 PARP1P09874 1014 aaKnown RBP28.1■■■□□ 2.09
CPNE1-217ENST00000439669 ASPRV1Q53RT3 343 aa28.1■■■□□ 2.09
CPNE1-217ENST00000439669 MUM1L1Q5H9M0 696 aa28.1■■■□□ 2.09
CPNE1-217ENST00000439669 UBA5Q9GZZ9 404 aa28.1■■■□□ 2.09
CPNE1-217ENST00000439669 CPVLQ9H3G5 476 aa28.1■■■□□ 2.09
CPNE1-217ENST00000439669 FRMPD3Q5JV73 1810 aa28.09■■■□□ 2.09
CPNE1-217ENST00000439669 POTEB2H3BUK9 544 aa28.09■■■□□ 2.09
CPNE1-217ENST00000439669 SEPT4O43236 478 aa28.09■■■□□ 2.09
CPNE1-217ENST00000439669 SART3Q15020 963 aaKnown RBP28.09■■■□□ 2.09
CPNE1-217ENST00000439669 ANO1Q5XXA6 986 aa28.09■■■□□ 2.09
CPNE1-217ENST00000439669 CHST3Q7LGC8 479 aa28.09■■■□□ 2.09
CPNE1-217ENST00000439669 MSL3Q8N5Y2 521 aaKnown RBP28.09■■■□□ 2.09
CPNE1-217ENST00000439669 C11orf49Q9H6J7 331 aa28.09■■■□□ 2.09
CPNE1-217ENST00000439669 NRBP1Q9UHY1 535 aa28.09■■■□□ 2.09
CPNE1-217ENST00000439669 CNPY2Q9Y2B0 182 aa28.09■■■□□ 2.09
CPNE1-217ENST00000439669 MKI67P46013 3256 aaKnown RBP28.09■■■□□ 2.09
CPNE1-217ENST00000439669 SLC27A2O14975 620 aa28.08■■■□□ 2.09
CPNE1-217ENST00000439669 MNX1P50219 401 aaPredicted RBP28.08■■■□□ 2.09
CPNE1-217ENST00000439669 NSMFQ6X4W1 530 aa28.08■■■□□ 2.09
CPNE1-217ENST00000439669 ZNF467Q7Z7K2 595 aaPredicted RBP28.08■■■□□ 2.09
CPNE1-217ENST00000439669 PNMA2Q9UL42 364 aa28.08■■■□□ 2.09
CPNE1-217ENST00000439669 PFASO15067 1338 aa28.08■■■□□ 2.09
CPNE1-217ENST00000439669 DHX16O60231 1041 aaKnown RBP28.07■■■□□ 2.08
CPNE1-217ENST00000439669 CNTN2Q02246 1040 aa28.07■■■□□ 2.08
CPNE1-217ENST00000439669 WTAPQ15007 396 aa28.07■■■□□ 2.08
CPNE1-217ENST00000439669 CREB3L3Q68CJ9 461 aa28.07■■■□□ 2.08
CPNE1-217ENST00000439669 MB21D2Q8IYB1 491 aaPredicted RBP28.07■■■□□ 2.08
CPNE1-217ENST00000439669 PPP4R2Q9NY27 417 aa28.07■■■□□ 2.08
CPNE1-217ENST00000439669 SYNGAP1Q96PV0 1343 aa28.07■■■□□ 2.08
CPNE1-217ENST00000439669 TMEM67Q5HYA8 995 aa28.06■■■□□ 2.08
CPNE1-217ENST00000439669 FGD4Q96M96 766 aa28.06■■■□□ 2.08
CPNE1-217ENST00000439669 ANTXR2P58335 489 aa28.05■■■□□ 2.08
CPNE1-217ENST00000439669 CDC37Q16543 378 aaPredicted RBP28.05■■■□□ 2.08
CPNE1-217ENST00000439669 MAMDC4Q6UXC1 1216 aa28.05■■■□□ 2.08
CPNE1-217ENST00000439669 FAM133AQ8N9E0 248 aa28.05■■■□□ 2.08
CPNE1-217ENST00000439669 WDR19Q8NEZ3 1342 aa28.05■■■□□ 2.08
CPNE1-217ENST00000439669 ZHX1Q9UKY1 873 aaPredicted RBP28.05■■■□□ 2.08
CPNE1-217ENST00000439669 MYCNP04198 464 aaPredicted RBP28.04■■■□□ 2.08
CPNE1-217ENST00000439669 NECTIN1Q15223 517 aa28.04■■■□□ 2.08
CPNE1-217ENST00000439669 ERICH6BQ5W0A0 696 aa28.04■■■□□ 2.08
CPNE1-217ENST00000439669 ADGRF4Q8IZF3 695 aa28.04■■■□□ 2.08
CPNE1-217ENST00000439669 SENP2Q9HC62 589 aa28.04■■■□□ 2.08
CPNE1-217ENST00000439669 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.04■■■□□ 2.08
CPNE1-217ENST00000439669 CYP39A1Q9NYL5 469 aa28.04■■■□□ 2.08
CPNE1-217ENST00000439669 SMCHD1A6NHR9 2005 aa28.03■■■□□ 2.08
CPNE1-217ENST00000439669 NFIBO00712 420 aa28.03■■■□□ 2.08
CPNE1-217ENST00000439669 SNAI1O95863 264 aaPredicted RBP28.03■■■□□ 2.08
CPNE1-217ENST00000439669 ZNF865P0CJ78 1059 aaPredicted RBP28.03■■■□□ 2.08
CPNE1-217ENST00000439669 USH1GQ495M9 461 aa28.03■■■□□ 2.08
CPNE1-217ENST00000439669 RNF20Q5VTR2 975 aa28.03■■■□□ 2.08
CPNE1-217ENST00000439669 ARMCX2Q7L311 632 aa28.03■■■□□ 2.08
CPNE1-217ENST00000439669 EVI5O60447 810 aa28.02■■■□□ 2.08
CPNE1-217ENST00000439669 RARBP10826 455 aa28.02■■■□□ 2.08
CPNE1-217ENST00000439669 AKR1A1P14550 325 aa28.02■■■□□ 2.08
CPNE1-217ENST00000439669 CCDC144CPQ8IYA2 1237 aa28.02■■■□□ 2.08
CPNE1-217ENST00000439669 STAG2Q8N3U4 1231 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms