RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 HLTFQ14527 1009 aaKnown RBP eCLIP11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 SOGA3Q5TF21 947 aa11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 PLCD4Q9BRC7 762 aa11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 GPCPD1Q9NPB8 672 aa11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 DCP1AQ9NPI6 582 aaPredicted RBP11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 FAM53CQ9NYF3 392 aa11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 AFDNP55196 1824 aaKnown RBP11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 GOLGA6L9A6NEM1 432 aa11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 UFL1O94874 794 aa11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 INPP5BP32019 993 aa11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 NFIXQ14938 502 aa11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 ODF2Q5BJF6 829 aa11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 USP17L2Q6R6M4 530 aa11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 ZSCAN29Q8IWY8 852 aaPredicted RBP11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 MLKLQ8NB16 471 aa11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 SH3RF3Q8TEJ3 882 aaPredicted RBP11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 PAGE5Q96GU1 130 aa11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 FOXP1Q9H334 677 aaPredicted RBP11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 L1RE1Q9UN81 338 aa11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 FAM169AQ9Y6X4 670 aa11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 RTL9Q8NET4 1388 aa11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 ABCC12Q96J65 1359 aa11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 ZNF804BA4D1E1 1349 aa11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 RDXP35241 583 aaKnown RBP11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 ERVK-24P63145 666 aa11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 SETQ01105 290 aaPredicted RBP11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 TMC4Q7Z404 712 aa11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 DNAAF5Q86Y56 855 aa11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 IQUBQ8NA54 791 aa11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 HPS3Q969F9 1004 aa11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 KANSL2Q9H9L4 492 aa11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 CD248Q9HCU0 757 aa11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 BIN2Q9UBW5 565 aaPredicted RBP11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 KRT14P02533 472 aa11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 SLURP2P0DP57 97 aa11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 SCG2P13521 617 aa11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 KIF5BP33176 963 aa11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 DYMQ7RTS9 669 aa11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 JAKMIP2Q96AA8 810 aa11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 MED15Q96RN5 788 aa11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 FAM207AQ9NSI2 230 aaPredicted RBP11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 MAGEC2Q9UBF1 373 aaPredicted RBP11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 SRPRBQ9Y5M8 271 aaKnown RBP11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 ZSCAN5CA6NGD5 496 aaPredicted RBP11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 UBAP1LF5GYI3 381 aa11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 GYPCP04921 128 aa11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 MAP2K2P36507 400 aa11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 TXKP42681 527 aa11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 SEC24CP53992 1094 aa11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 MUM1L1Q5H9M0 696 aa11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 TADA2BQ86TJ2 420 aa11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 OTUD6BQ8N6M0 293 aa11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 CDK5RAP3Q96JB5 506 aa11.1□□□□□ -0.63
CDC42SE1-202ENST00000439374 CCNT1O60563 726 aaKnown RBP11.09□□□□□ -0.63
CDC42SE1-202ENST00000439374 UBE4AQ14139 1066 aa11.09□□□□□ -0.63
CDC42SE1-202ENST00000439374 GRIK5Q16478 980 aa11.09□□□□□ -0.63
CDC42SE1-202ENST00000439374 TDRD12Q587J7 1177 aaKnown RBP11.09□□□□□ -0.63
CDC42SE1-202ENST00000439374 TYW1BQ6NUM6 668 aa11.09□□□□□ -0.63
CDC42SE1-202ENST00000439374 DTHD1Q6ZMT9 781 aa11.09□□□□□ -0.63
CDC42SE1-202ENST00000439374 LRRC47Q8N1G4 583 aaKnown RBP11.09□□□□□ -0.63
CDC42SE1-202ENST00000439374 NELFBQ8WX92 580 aa11.09□□□□□ -0.63
CDC42SE1-202ENST00000439374 ASIC1P78348 528 aa11.09□□□□□ -0.63
CDC42SE1-202ENST00000439374 GUCY1A3Q02108 690 aa11.09□□□□□ -0.63
CDC42SE1-202ENST00000439374 DPYDQ12882 1025 aa11.09□□□□□ -0.63
CDC42SE1-202ENST00000439374 KRT31Q15323 416 aa11.09□□□□□ -0.63
CDC42SE1-202ENST00000439374 ALX1Q15699 326 aa11.09□□□□□ -0.63
CDC42SE1-202ENST00000439374 KANK3Q6NY19 840 aa11.09□□□□□ -0.63
CDC42SE1-202ENST00000439374 FAM196AQ6ZSG2 479 aa11.09□□□□□ -0.63
CDC42SE1-202ENST00000439374 TEX11Q8IYF3 940 aa11.09□□□□□ -0.63
CDC42SE1-202ENST00000439374 GIMAP7Q8NHV1 300 aa11.09□□□□□ -0.63
CDC42SE1-202ENST00000439374 MYCBPQ99417 103 aaPredicted RBP11.09□□□□□ -0.63
CDC42SE1-202ENST00000439374 RNF26Q9BY78 433 aaPredicted RBP11.09□□□□□ -0.63
CDC42SE1-202ENST00000439374 HPSEQ9Y251 543 aa11.09□□□□□ -0.63
CDC42SE1-202ENST00000439374 B4DLN1 442 aa11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 MFAP3LO75121 409 aa11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 SKAP2O75563 359 aaPredicted RBP11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 SCNN1DP51172 638 aa11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 KAT2BQ92831 832 aa11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 GJA10Q969M2 543 aa11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 NSUN4Q96CB9 384 aaKnown RBP11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 SELENOOQ9BVL4 669 aa11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 TRIM31Q9BZY9 425 aa11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 GBP3Q9H0R5 595 aa11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 MLXIPQ9HAP2 919 aa11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 TBC1D7Q9P0N9 293 aa11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 TUBE1Q9UJT0 475 aa11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 PACSIN2Q9UNF0 486 aaPredicted RBP11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 SAR1BQ9Y6B6 198 aa11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 CDC25CP30307 473 aa11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 TECP42680 631 aa11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 MTIF2P46199 727 aaKnown RBP11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 TNNI2P48788 182 aa11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 IFT88Q13099 833 aa11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 LLGL1Q15334 1064 aa11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 CNBD1Q8NA66 436 aa11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 BANK1Q8NDB2 785 aa11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 UHMK1Q8TAS1 419 aaKnown RBP11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 FAM71BQ8TC56 605 aa11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 BSDC1Q9NW68 430 aaPredicted RBP11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 EPN1Q9Y6I3 576 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms