RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 OSBPP22059 807 aa23.87■■□□□ 1.41
CHD3-204ENST00000439235 DSG3P32926 999 aa23.87■■□□□ 1.41
CHD3-204ENST00000439235 WWC2Q6AWC2 1192 aa23.87■■□□□ 1.41
CHD3-204ENST00000439235 PPP1R18Q6NYC8 613 aa23.87■■□□□ 1.41
CHD3-204ENST00000439235 FBXO18Q8NFZ0 1043 aa23.87■■□□□ 1.41
CHD3-204ENST00000439235 GPKOWQ92917 476 aaPredicted RBP eCLIP23.87■■□□□ 1.41
CHD3-204ENST00000439235 AMNQ9BXJ7 453 aa23.87■■□□□ 1.41
CHD3-204ENST00000439235 CREBZFQ9NS37 354 aa23.87■■□□□ 1.41
CHD3-204ENST00000439235 HOXC10Q9NYD6 342 aa23.87■■□□□ 1.41
CHD3-204ENST00000439235 VPS54Q9P1Q0 977 aa23.87■■□□□ 1.41
CHD3-204ENST00000439235 PNMA2Q9UL42 364 aa23.87■■□□□ 1.41
CHD3-204ENST00000439235 KRT40Q6A162 431 aa23.86■■□□□ 1.41
CHD3-204ENST00000439235 FBXO11Q86XK2 927 aa23.86■■□□□ 1.41
CHD3-204ENST00000439235 PNMA3Q9UL41 463 aa23.86■■□□□ 1.41
CHD3-204ENST00000439235 SLC45A1Q9Y2W3 748 aa23.86■■□□□ 1.41
CHD3-204ENST00000439235 STXBP3O00186 592 aa23.85■■□□□ 1.41
CHD3-204ENST00000439235 NAPAP54920 295 aa23.85■■□□□ 1.41
CHD3-204ENST00000439235 GPAT2Q6NUI2 795 aa23.85■■□□□ 1.41
CHD3-204ENST00000439235 ANKRD23Q86SG2 305 aa23.85■■□□□ 1.41
CHD3-204ENST00000439235 BRI3BPQ8WY22 251 aa23.85■■□□□ 1.41
CHD3-204ENST00000439235 ATG4CQ96DT6 458 aa23.85■■□□□ 1.41
CHD3-204ENST00000439235 SLC38A10Q9HBR0 1119 aa23.85■■□□□ 1.41
CHD3-204ENST00000439235 MTMR6Q9Y217 621 aa23.85■■□□□ 1.41
CHD3-204ENST00000439235 MYH6P13533 1939 aa23.84■■□□□ 1.41
CHD3-204ENST00000439235 SPDYE16A6NNV3 312 aaPredicted RBP23.84■■□□□ 1.41
CHD3-204ENST00000439235 NLRP5P59047 1200 aa23.84■■□□□ 1.41
CHD3-204ENST00000439235 SNAP25P60880 206 aa23.84■■□□□ 1.41
CHD3-204ENST00000439235 GUCY1B3Q02153 619 aa23.84■■□□□ 1.41
CHD3-204ENST00000439235 SAFBQ15424 915 aaKnown RBP eCLIP23.84■■□□□ 1.41
CHD3-204ENST00000439235 CCDC174Q6PII3 467 aa23.84■■□□□ 1.41
CHD3-204ENST00000439235 BRMS1Q9HCU9 246 aa23.84■■□□□ 1.41
CHD3-204ENST00000439235 TESPA1A2RU30 521 aaPredicted RBP23.83■■□□□ 1.41
CHD3-204ENST00000439235 VWA5AO00534 786 aa23.83■■□□□ 1.41
CHD3-204ENST00000439235 PPP1R11O60927 126 aaPredicted RBP23.83■■□□□ 1.41
CHD3-204ENST00000439235 BRD1O95696 1058 aa23.83■■□□□ 1.41
CHD3-204ENST00000439235 MMP1P03956 469 aa23.83■■□□□ 1.41
CHD3-204ENST00000439235 ZSCAN22P10073 491 aaPredicted RBP23.83■■□□□ 1.41
CHD3-204ENST00000439235 CALML3P27482 149 aa23.83■■□□□ 1.41
CHD3-204ENST00000439235 PKP1Q13835 747 aa23.83■■□□□ 1.41
CHD3-204ENST00000439235 OTUD7BQ6GQQ9 843 aa23.83■■□□□ 1.41
CHD3-204ENST00000439235 PAXIP1Q6ZW49 1069 aaPredicted RBP23.83■■□□□ 1.41
CHD3-204ENST00000439235 MB21D1Q8N884 522 aa23.83■■□□□ 1.41
CHD3-204ENST00000439235 GTF3C2Q8WUA4 911 aaPredicted RBP23.83■■□□□ 1.41
CHD3-204ENST00000439235 PHF20Q9BVI0 1012 aa23.83■■□□□ 1.41
CHD3-204ENST00000439235 ASCC2Q9H1I8 757 aaPredicted RBP23.83■■□□□ 1.41
CHD3-204ENST00000439235 ADAMTS5Q9UNA0 930 aa23.83■■□□□ 1.41
CHD3-204ENST00000439235 PCDHA1Q9Y5I3 950 aa23.83■■□□□ 1.41
CHD3-204ENST00000439235 ESYT2A0FGR8 921 aa23.82■■□□□ 1.4
CHD3-204ENST00000439235 BTBD19C9JJ37 291 aa23.82■■□□□ 1.4
CHD3-204ENST00000439235 CAPN15O75808 1086 aa23.82■■□□□ 1.4
CHD3-204ENST00000439235 ICAM1P05362 532 aa23.82■■□□□ 1.4
CHD3-204ENST00000439235 OAZ1P54368 228 aa23.82■■□□□ 1.4
CHD3-204ENST00000439235 GALNT17Q6IS24 598 aa23.82■■□□□ 1.4
CHD3-204ENST00000439235 COA7Q96BR5 231 aa23.82■■□□□ 1.4
CHD3-204ENST00000439235 GJB4Q9NTQ9 266 aa23.82■■□□□ 1.4
CHD3-204ENST00000439235 KCNJ14Q9UNX9 436 aa23.82■■□□□ 1.4
CHD3-204ENST00000439235 PARP14Q460N5 1801 aa23.82■■□□□ 1.4
CHD3-204ENST00000439235 RASSF10A6NK89 507 aa23.81■■□□□ 1.4
CHD3-204ENST00000439235 FAM155AB1AL88 458 aaPredicted RBP23.81■■□□□ 1.4
CHD3-204ENST00000439235 INHBEP58166 350 aa23.81■■□□□ 1.4
CHD3-204ENST00000439235 SREBF2Q12772 1141 aa23.81■■□□□ 1.4
CHD3-204ENST00000439235 LBX2Q6XYB7 198 aa23.81■■□□□ 1.4
CHD3-204ENST00000439235 C6orf50Q9HD87 102 aa23.81■■□□□ 1.4
CHD3-204ENST00000439235 CCPG1Q9ULG6 757 aa23.81■■□□□ 1.4
CHD3-204ENST00000439235 ABCB11O95342 1321 aa23.81■■□□□ 1.4
CHD3-204ENST00000439235 PDHXO00330 501 aa23.8■■□□□ 1.4
CHD3-204ENST00000439235 GNA11P29992 359 aa23.8■■□□□ 1.4
CHD3-204ENST00000439235 KRT2P35908 639 aa23.8■■□□□ 1.4
CHD3-204ENST00000439235 HERVK_113P62684 666 aa23.8■■□□□ 1.4
CHD3-204ENST00000439235 GNL2Q13823 731 aaKnown RBP23.8■■□□□ 1.4
CHD3-204ENST00000439235 DEFB115Q30KQ5 88 aa23.8■■□□□ 1.4
CHD3-204ENST00000439235 USH1GQ495M9 461 aa23.8■■□□□ 1.4
CHD3-204ENST00000439235 COL13A1Q5TAT6 717 aaPredicted RBP23.8■■□□□ 1.4
CHD3-204ENST00000439235 MCTP1Q6DN14 999 aa23.8■■□□□ 1.4
CHD3-204ENST00000439235 TYW1BQ6NUM6 668 aa23.8■■□□□ 1.4
CHD3-204ENST00000439235 SHISA4Q96DD7 197 aa23.8■■□□□ 1.4
CHD3-204ENST00000439235 ZMYND12Q9H0C1 365 aa23.8■■□□□ 1.4
CHD3-204ENST00000439235 GLT8D2Q9H1C3 349 aa23.8■■□□□ 1.4
CHD3-204ENST00000439235 ZCCHC17Q9NP64 241 aaKnown RBP23.8■■□□□ 1.4
CHD3-204ENST00000439235 ATP2A1O14983 1001 aa23.79■■□□□ 1.4
CHD3-204ENST00000439235 F13A1P00488 732 aa23.79■■□□□ 1.4
CHD3-204ENST00000439235 ADCY7P51828 1080 aa23.79■■□□□ 1.4
CHD3-204ENST00000439235 DIS3L2Q8IYB7 885 aaKnown RBP23.79■■□□□ 1.4
CHD3-204ENST00000439235 DAGLBQ8NCG7 672 aa23.79■■□□□ 1.4
CHD3-204ENST00000439235 REPS2Q8NFH8 660 aa23.79■■□□□ 1.4
CHD3-204ENST00000439235 BICD2Q8TD16 824 aa23.79■■□□□ 1.4
CHD3-204ENST00000439235 PARK7Q99497 189 aaKnown RBP23.79■■□□□ 1.4
CHD3-204ENST00000439235 P2RX7Q99572 595 aaKnown RBP23.79■■□□□ 1.4
CHD3-204ENST00000439235 ZSCAN16Q9H4T2 348 aaPredicted RBP23.79■■□□□ 1.4
CHD3-204ENST00000439235 RAVER2Q9HCJ3 691 aaKnown RBP23.79■■□□□ 1.4
CHD3-204ENST00000439235 ZDHHC9Q9Y397 364 aa23.79■■□□□ 1.4
CHD3-204ENST00000439235 MRPL11Q9Y3B7 192 aaKnown RBP23.79■■□□□ 1.4
CHD3-204ENST00000439235 ZNF536O15090 1300 aa23.79■■□□□ 1.4
CHD3-204ENST00000439235 A0A0G2JMZ2 1700 aa23.79■■□□□ 1.4
CHD3-204ENST00000439235 RLFQ13129 1914 aa23.78■■□□□ 1.4
CHD3-204ENST00000439235 SMCO2A6NFE2 343 aa23.78■■□□□ 1.4
CHD3-204ENST00000439235 HTRA3P83110 453 aa23.78■■□□□ 1.4
CHD3-204ENST00000439235 KIF23Q02241 960 aaPredicted RBP23.78■■□□□ 1.4
CHD3-204ENST00000439235 FOXD4L5Q5VV16 416 aaPredicted RBP23.78■■□□□ 1.4
CHD3-204ENST00000439235 CYP4F22Q6NT55 531 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms