RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 NFE2L3Q9Y4A8 694 aa15.74■□□□□ 0.11
PTCHD3-201ENST00000438700 GOLGA8HP0CJ92 632 aa15.74■□□□□ 0.11
PTCHD3-201ENST00000438700 NOVP48745 357 aa15.74■□□□□ 0.11
PTCHD3-201ENST00000438700 GNAQP50148 359 aa15.74■□□□□ 0.11
PTCHD3-201ENST00000438700 MORC3Q14149 939 aa15.74■□□□□ 0.11
PTCHD3-201ENST00000438700 PFKFB3Q16875 520 aaPredicted RBP15.74■□□□□ 0.11
PTCHD3-201ENST00000438700 ERCC6LQ2NKX8 1250 aa15.74■□□□□ 0.11
PTCHD3-201ENST00000438700 NT5DC1Q5TFE4 455 aa15.74■□□□□ 0.11
PTCHD3-201ENST00000438700 ZSCAN29Q8IWY8 852 aaPredicted RBP15.74■□□□□ 0.11
PTCHD3-201ENST00000438700 ELOA2Q8IYF1 753 aaPredicted RBP15.74■□□□□ 0.11
PTCHD3-201ENST00000438700 EHD4Q9H223 541 aa15.74■□□□□ 0.11
PTCHD3-201ENST00000438700 MTMR4Q9NYA4 1195 aa15.74■□□□□ 0.11
PTCHD3-201ENST00000438700 MYO3BQ8WXR4 1341 aa15.74■□□□□ 0.11
PTCHD3-201ENST00000438700 PALM3A6NDB9 673 aaPredicted RBP15.73■□□□□ 0.11
PTCHD3-201ENST00000438700 VIL1P09327 827 aaKnown RBP15.73■□□□□ 0.11
PTCHD3-201ENST00000438700 MCM7P33993 719 aa15.73■□□□□ 0.11
PTCHD3-201ENST00000438700 EIF6P56537 245 aaKnown RBP15.73■□□□□ 0.11
PTCHD3-201ENST00000438700 SLC35G1Q2M3R5 365 aa15.73■□□□□ 0.11
PTCHD3-201ENST00000438700 SH3BP5LQ7L8J4 393 aa15.73■□□□□ 0.11
PTCHD3-201ENST00000438700 NIM1KQ8IY84 436 aa15.73■□□□□ 0.11
PTCHD3-201ENST00000438700 BBXQ8WY36 941 aaPredicted RBP15.73■□□□□ 0.11
PTCHD3-201ENST00000438700 DHX36Q9H2U1 1008 aaKnown RBP15.73■□□□□ 0.11
PTCHD3-201ENST00000438700 DNAJC18Q9H819 358 aa15.73■□□□□ 0.11
PTCHD3-201ENST00000438700 INTS13Q9NVM9 706 aa15.73■□□□□ 0.11
PTCHD3-201ENST00000438700 ZBTB12Q9Y330 459 aaPredicted RBP15.73■□□□□ 0.11
PTCHD3-201ENST00000438700 FER1L6Q2WGJ9 1857 aa15.73■□□□□ 0.11
PTCHD3-201ENST00000438700 IGKV6D-41A0A0C4DH26 115 aa15.73■□□□□ 0.11
PTCHD3-201ENST00000438700 FAM196BA6NMK8 535 aa15.73■□□□□ 0.11
PTCHD3-201ENST00000438700 CBFA2T2O43439 604 aa15.73■□□□□ 0.11
PTCHD3-201ENST00000438700 STAMQ92783 540 aa15.73■□□□□ 0.11
PTCHD3-201ENST00000438700 GREB1LQ9C091 1923 aaPredicted RBP15.73■□□□□ 0.11
PTCHD3-201ENST00000438700 CYTH3O43739 400 aa15.72■□□□□ 0.11
PTCHD3-201ENST00000438700 CDK11BP21127 795 aaKnown RBP15.72■□□□□ 0.11
PTCHD3-201ENST00000438700 KLHL10Q6JEL2 608 aa15.72■□□□□ 0.11
PTCHD3-201ENST00000438700 KANK3Q6NY19 840 aa15.72■□□□□ 0.11
PTCHD3-201ENST00000438700 USP17L2Q6R6M4 530 aa15.72■□□□□ 0.11
PTCHD3-201ENST00000438700 LRRC47Q8N1G4 583 aaKnown RBP15.72■□□□□ 0.11
PTCHD3-201ENST00000438700 MLKLQ8NB16 471 aa15.72■□□□□ 0.11
PTCHD3-201ENST00000438700 RASGRP4Q8TDF6 673 aa15.72■□□□□ 0.11
PTCHD3-201ENST00000438700 UPF1Q92900 1129 aaKnown RBP eCLIP15.72■□□□□ 0.11
PTCHD3-201ENST00000438700 GMLQ99445 158 aa15.72■□□□□ 0.11
PTCHD3-201ENST00000438700 VPS33BQ9H267 617 aa15.72■□□□□ 0.11
PTCHD3-201ENST00000438700 TMEM51Q9NW97 253 aa15.72■□□□□ 0.11
PTCHD3-201ENST00000438700 ZNRF3Q9ULT6 936 aa15.72■□□□□ 0.11
PTCHD3-201ENST00000438700 KLRF2D3W0D1 207 aa15.72■□□□□ 0.11
PTCHD3-201ENST00000438700 MPHOSPH10O00566 681 aaKnown RBP15.72■□□□□ 0.11
PTCHD3-201ENST00000438700 NPM3O75607 178 aaKnown RBP15.72■□□□□ 0.11
PTCHD3-201ENST00000438700 PARP1P09874 1014 aaKnown RBP15.72■□□□□ 0.11
PTCHD3-201ENST00000438700 VSTM4Q8IW00 320 aa15.72■□□□□ 0.11
PTCHD3-201ENST00000438700 FERMT2Q96AC1 680 aa15.72■□□□□ 0.11
PTCHD3-201ENST00000438700 MED15Q96RN5 788 aa15.72■□□□□ 0.11
PTCHD3-201ENST00000438700 CPVLQ9H3G5 476 aa15.72■□□□□ 0.11
PTCHD3-201ENST00000438700 PI4KBQ9UBF8 816 aa15.72■□□□□ 0.11
PTCHD3-201ENST00000438700 SMYD4Q8IYR2 804 aaPredicted RBP15.71■□□□□ 0.11
PTCHD3-201ENST00000438700 TAOK3Q9H2K8 898 aa15.71■□□□□ 0.11
PTCHD3-201ENST00000438700 SAMSN1Q9NSI8 373 aaKnown RBP15.71■□□□□ 0.11
PTCHD3-201ENST00000438700 PSDA5PKW4 1024 aaPredicted RBP15.71■□□□□ 0.11
PTCHD3-201ENST00000438700 SPDYE2BA6NHP3 402 aa15.71■□□□□ 0.11
PTCHD3-201ENST00000438700 USP17L5A8MUK1 530 aa15.71■□□□□ 0.11
PTCHD3-201ENST00000438700 SLU7O95391 586 aaKnown RBP15.71■□□□□ 0.11
PTCHD3-201ENST00000438700 SPDYE6P0CI01 402 aa15.71■□□□□ 0.11
PTCHD3-201ENST00000438700 ATP2C1P98194 919 aaPredicted RBP15.71■□□□□ 0.11
PTCHD3-201ENST00000438700 PAGE5Q96GU1 130 aa15.71■□□□□ 0.11
PTCHD3-201ENST00000438700 ERO1AQ96HE7 468 aa15.71■□□□□ 0.11
PTCHD3-201ENST00000438700 PPP1R13BQ96KQ4 1090 aa15.71■□□□□ 0.11
PTCHD3-201ENST00000438700 SGIP1Q9BQI5 828 aa15.71■□□□□ 0.11
PTCHD3-201ENST00000438700 FAM53CQ9NYF3 392 aa15.71■□□□□ 0.11
PTCHD3-201ENST00000438700 DACH1Q9UI36 760 aa15.71■□□□□ 0.11
PTCHD3-201ENST00000438700 MYH4Q9Y623 1939 aa15.71■□□□□ 0.11
PTCHD3-201ENST00000438700 NRDCO43847 1150 aa15.7■□□□□ 0.1
PTCHD3-201ENST00000438700 BMP15O95972 392 aa15.7■□□□□ 0.1
PTCHD3-201ENST00000438700 SYT10Q6XYQ8 523 aa15.7■□□□□ 0.1
PTCHD3-201ENST00000438700 SPATA20Q8TB22 786 aa15.7■□□□□ 0.1
PTCHD3-201ENST00000438700 LZTS2Q9BRK4 669 aa15.7■□□□□ 0.1
PTCHD3-201ENST00000438700 TRIM34Q9BYJ4 488 aa15.7■□□□□ 0.1
PTCHD3-201ENST00000438700 HDAC9Q9UKV0 1011 aa15.7■□□□□ 0.1
PTCHD3-201ENST00000438700 TTLL1O95922 423 aa15.7■□□□□ 0.1
PTCHD3-201ENST00000438700 STX17P56962 302 aa15.7■□□□□ 0.1
PTCHD3-201ENST00000438700 TYW1BQ6NUM6 668 aa15.7■□□□□ 0.1
PTCHD3-201ENST00000438700 OGFOD1Q8N543 542 aa15.7■□□□□ 0.1
PTCHD3-201ENST00000438700 TRIML1Q8N9V2 468 aa15.7■□□□□ 0.1
PTCHD3-201ENST00000438700 CLRN2A0PK11 232 aa15.69■□□□□ 0.1
PTCHD3-201ENST00000438700 ENTPD3O75355 529 aa15.69■□□□□ 0.1
PTCHD3-201ENST00000438700 PDHBP11177 359 aa15.69■□□□□ 0.1
PTCHD3-201ENST00000438700 ZNF18P17022 549 aa15.69■□□□□ 0.1
PTCHD3-201ENST00000438700 CDC25AP30304 524 aa15.69■□□□□ 0.1
PTCHD3-201ENST00000438700 DLGAP5Q15398 846 aa15.69■□□□□ 0.1
PTCHD3-201ENST00000438700 IL17AQ16552 155 aa15.69■□□□□ 0.1
PTCHD3-201ENST00000438700 SHROOM1Q2M3G4 852 aaPredicted RBP15.69■□□□□ 0.1
PTCHD3-201ENST00000438700 ENOX1Q8TC92 643 aaKnown RBP15.69■□□□□ 0.1
PTCHD3-201ENST00000438700 CCDC34Q96HJ3 373 aa15.69■□□□□ 0.1
PTCHD3-201ENST00000438700 SPZ1Q9BXG8 430 aa15.69■□□□□ 0.1
PTCHD3-201ENST00000438700 ATRNL1Q5VV63 1379 aa15.69■□□□□ 0.1
PTCHD3-201ENST00000438700 FRMPD2Q68DX3 1309 aaPredicted RBP15.69■□□□□ 0.1
PTCHD3-201ENST00000438700 NFKBIEO00221 500 aa15.69■□□□□ 0.1
PTCHD3-201ENST00000438700 SOCS7O14512 581 aa15.69■□□□□ 0.1
PTCHD3-201ENST00000438700 CD44P16070 742 aaKnown RBP15.69■□□□□ 0.1
PTCHD3-201ENST00000438700 CXCL9Q07325 125 aa15.69■□□□□ 0.1
PTCHD3-201ENST00000438700 BLIDQ8IZY5 108 aa15.69■□□□□ 0.1
PTCHD3-201ENST00000438700 CCDC17Q96LX7 622 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms