RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 JDP2Q8WYK2 163 aa4.71□□□□□ -1.66
HMGB1P12-201ENST00000438594 JARID2Q92833 1246 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P12-201ENST00000438594 RNF34Q969K3 372 aa4.71□□□□□ -1.66
HMGB1P12-201ENST00000438594 ACSF2Q96CM8 615 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P12-201ENST00000438594 SCYL1Q96KG9 808 aa4.71□□□□□ -1.66
HMGB1P12-201ENST00000438594 MIR1-1HGQ9H1L0 117 aa4.71□□□□□ -1.66
HMGB1P12-201ENST00000438594 TMPRSS5Q9H3S3 457 aa4.71□□□□□ -1.66
HMGB1P12-201ENST00000438594 METTL5Q9NRN9 209 aaKnown RBP4.71□□□□□ -1.66
HMGB1P12-201ENST00000438594 EBF1Q9UH73 591 aa4.71□□□□□ -1.66
HMGB1P12-201ENST00000438594 MBD1Q9UIS9 605 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P12-201ENST00000438594 UPK3BL1B0FP48 263 aa4.7□□□□□ -1.66
HMGB1P12-201ENST00000438594 UPK3BL2E5RIL1 263 aa4.7□□□□□ -1.66
HMGB1P12-201ENST00000438594 ENPP3O14638 875 aa4.7□□□□□ -1.66
HMGB1P12-201ENST00000438594 USP2O75604 605 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P12-201ENST00000438594 ADRB1P08588 477 aa4.7□□□□□ -1.66
HMGB1P12-201ENST00000438594 PLCG1P19174 1290 aa4.7□□□□□ -1.66
HMGB1P12-201ENST00000438594 SDHBP21912 280 aa4.7□□□□□ -1.66
HMGB1P12-201ENST00000438594 RPL10P27635 214 aaKnown RBP4.7□□□□□ -1.66
HMGB1P12-201ENST00000438594 XPCQ01831 940 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P12-201ENST00000438594 TEKQ02763 1124 aa4.7□□□□□ -1.66
HMGB1P12-201ENST00000438594 ARID5AQ03989 594 aa4.7□□□□□ -1.66
HMGB1P12-201ENST00000438594 GNL2Q13823 731 aaKnown RBP4.7□□□□□ -1.66
HMGB1P12-201ENST00000438594 AMOTL1Q8IY63 956 aa4.7□□□□□ -1.66
HMGB1P12-201ENST00000438594 SYT8Q8NBV8 401 aa4.7□□□□□ -1.66
HMGB1P12-201ENST00000438594 ADAM7Q9H2U9 754 aa4.7□□□□□ -1.66
HMGB1P12-201ENST00000438594 GEMIN8Q9NWZ8 242 aaKnown RBP4.7□□□□□ -1.66
HMGB1P12-201ENST00000438594 TACC3Q9Y6A5 838 aa4.7□□□□□ -1.66
HMGB1P12-201ENST00000438594 SSU72P8A0A1W2PR75 194 aa4.69□□□□□ -1.66
HMGB1P12-201ENST00000438594 SLC22A31A6NKX4 558 aa4.69□□□□□ -1.66
HMGB1P12-201ENST00000438594 VIL1P09327 827 aaKnown RBP4.69□□□□□ -1.66
HMGB1P12-201ENST00000438594 PDGFRBP09619 1106 aa4.69□□□□□ -1.66
HMGB1P12-201ENST00000438594 KRTAP10-2P60368 255 aa4.69□□□□□ -1.66
HMGB1P12-201ENST00000438594 NFKB2Q00653 900 aa4.69□□□□□ -1.66
HMGB1P12-201ENST00000438594 UBE4AQ14139 1066 aa4.69□□□□□ -1.66
HMGB1P12-201ENST00000438594 MAP9Q49MG5 647 aa4.69□□□□□ -1.66
HMGB1P12-201ENST00000438594 WDR78Q5VTH9 848 aa4.69□□□□□ -1.66
HMGB1P12-201ENST00000438594 DIEXFQ68CQ4 756 aaKnown RBP4.69□□□□□ -1.66
HMGB1P12-201ENST00000438594 KRTAP5-3Q6L8H2 238 aa4.69□□□□□ -1.66
HMGB1P12-201ENST00000438594 WAPLQ7Z5K2 1190 aa4.69□□□□□ -1.66
HMGB1P12-201ENST00000438594 SP8Q8IXZ3 490 aa4.69□□□□□ -1.66
HMGB1P12-201ENST00000438594 CYB5D2Q8WUJ1 264 aa4.69□□□□□ -1.66
HMGB1P12-201ENST00000438594 DACT3Q96B18 629 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P12-201ENST00000438594 SHISA4Q96DD7 197 aa4.69□□□□□ -1.66
HMGB1P12-201ENST00000438594 C8orf48Q96LL4 319 aa4.69□□□□□ -1.66
HMGB1P12-201ENST00000438594 FAM161BQ96MY7 647 aa4.69□□□□□ -1.66
HMGB1P12-201ENST00000438594 ASCC2Q9H1I8 757 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P12-201ENST00000438594 KCNG1Q9UIX4 513 aa4.69□□□□□ -1.66
HMGB1P12-201ENST00000438594 FBXO9Q9UK97 447 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P12-201ENST00000438594 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P12-201ENST00000438594 CORINQ9Y5Q5 1042 aa4.69□□□□□ -1.66
HMGB1P12-201ENST00000438594 N4BP3O15049 544 aa4.68□□□□□ -1.66
HMGB1P12-201ENST00000438594 VIPR1P32241 457 aa4.68□□□□□ -1.66
HMGB1P12-201ENST00000438594 ZNF76P36508 570 aa4.68□□□□□ -1.66
HMGB1P12-201ENST00000438594 LIG3P49916 1009 aa4.68□□□□□ -1.66
HMGB1P12-201ENST00000438594 YARSP54577 528 aaKnown RBP4.68□□□□□ -1.66
HMGB1P12-201ENST00000438594 RPS26P62854 115 aaKnown RBP4.68□□□□□ -1.66
HMGB1P12-201ENST00000438594 PLP2Q04941 152 aa4.68□□□□□ -1.66
HMGB1P12-201ENST00000438594 CNKSR3Q6P9H4 555 aa4.68□□□□□ -1.66
HMGB1P12-201ENST00000438594 CEP128Q6ZU80 1094 aa4.68□□□□□ -1.66
HMGB1P12-201ENST00000438594 NLRX1Q86UT6 975 aa4.68□□□□□ -1.66
HMGB1P12-201ENST00000438594 MCF2L2Q86YR7 1114 aa4.68□□□□□ -1.66
HMGB1P12-201ENST00000438594 RNF141Q8WVD5 230 aa4.68□□□□□ -1.66
HMGB1P12-201ENST00000438594 IL17RAQ96F46 866 aa4.68□□□□□ -1.66
HMGB1P12-201ENST00000438594 SLC39A13Q96H72 371 aa4.68□□□□□ -1.66
HMGB1P12-201ENST00000438594 MRFAP1L1Q96HT8 127 aa4.68□□□□□ -1.66
HMGB1P12-201ENST00000438594 JADE2Q9NQC1 790 aa4.68□□□□□ -1.66
HMGB1P12-201ENST00000438594 TYW1Q9NV66 732 aaKnown RBP4.68□□□□□ -1.66
HMGB1P12-201ENST00000438594 ADAM30Q9UKF2 790 aa4.68□□□□□ -1.66
HMGB1P12-201ENST00000438594 SHISA3A0PJX4 238 aa4.67□□□□□ -1.66
HMGB1P12-201ENST00000438594 CFAP69A5D8W1 941 aa4.67□□□□□ -1.66
HMGB1P12-201ENST00000438594 EIF4BP23588 611 aaKnown RBP4.67□□□□□ -1.66
HMGB1P12-201ENST00000438594 FMR1Q06787 632 aaKnown RBP eCLIP4.67□□□□□ -1.66
HMGB1P12-201ENST00000438594 NFE2L2Q16236 605 aa4.67□□□□□ -1.66
HMGB1P12-201ENST00000438594 ZXDCQ2QGD7 858 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P12-201ENST00000438594 PLEKHG4Q58EX7 1191 aa4.67□□□□□ -1.66
HMGB1P12-201ENST00000438594 OLFML2BQ68BL8 750 aa4.67□□□□□ -1.66
HMGB1P12-201ENST00000438594 RNPC3Q96LT9 517 aaKnown RBP4.67□□□□□ -1.66
HMGB1P12-201ENST00000438594 IER2Q9BTL4 223 aa4.67□□□□□ -1.66
HMGB1P12-201ENST00000438594 BDH2Q9BUT1 245 aa4.67□□□□□ -1.66
HMGB1P12-201ENST00000438594 CNTD2Q9H8S5 307 aa4.67□□□□□ -1.66
HMGB1P12-201ENST00000438594 SWAP70Q9UH65 585 aa4.67□□□□□ -1.66
HMGB1P12-201ENST00000438594 KLHL3Q9UH77 587 aa4.67□□□□□ -1.66
HMGB1P12-201ENST00000438594 TCEAL9Q9UHQ7 104 aa4.67□□□□□ -1.66
HMGB1P12-201ENST00000438594 NRBP1Q9UHY1 535 aa4.67□□□□□ -1.66
HMGB1P12-201ENST00000438594 THRAP3Q9Y2W1 955 aaKnown RBP4.67□□□□□ -1.66
HMGB1P12-201ENST00000438594 PRKAB1Q9Y478 270 aa4.67□□□□□ -1.66
HMGB1P12-201ENST00000438594 ZNF500O60304 480 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P12-201ENST00000438594 STK10O94804 968 aaKnown RBP4.66□□□□□ -1.66
HMGB1P12-201ENST00000438594 PTMAP06454 111 aaKnown RBP4.66□□□□□ -1.66
HMGB1P12-201ENST00000438594 FGRP09769 529 aa4.66□□□□□ -1.66
HMGB1P12-201ENST00000438594 INSRRP14616 1297 aa4.66□□□□□ -1.66
HMGB1P12-201ENST00000438594 RPL6Q02878 288 aaKnown RBP4.66□□□□□ -1.66
HMGB1P12-201ENST00000438594 SERINC3Q13530 473 aa4.66□□□□□ -1.66
HMGB1P12-201ENST00000438594 DHX8Q14562 1220 aaKnown RBP4.66□□□□□ -1.66
HMGB1P12-201ENST00000438594 PUM1Q14671 1186 aaKnown RBP eCLIP4.66□□□□□ -1.66
HMGB1P12-201ENST00000438594 ODR4Q5SWX8 454 aa4.66□□□□□ -1.66
HMGB1P12-201ENST00000438594 AGMOQ6ZNB7 445 aa4.66□□□□□ -1.66
HMGB1P12-201ENST00000438594 RINLQ6ZS11 566 aa4.66□□□□□ -1.66
HMGB1P12-201ENST00000438594 LINC01599Q8WXQ3 324 aa4.66□□□□□ -1.66
HMGB1P12-201ENST00000438594 SECISBP2LQ93073 1101 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms