RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 FSCBQ5H9T9 825 aa12.56□□□□□ -0.4
PTCH1-209ENST00000437951 SIRT1Q96EB6 747 aa12.56□□□□□ -0.4
PTCH1-209ENST00000437951 MORC3Q14149 939 aa12.56□□□□□ -0.4
PTCH1-209ENST00000437951 ANGEL1Q9UNK9 670 aaKnown RBP12.56□□□□□ -0.4
PTCH1-209ENST00000437951 ZNF644Q9H582 1327 aaPredicted RBP12.56□□□□□ -0.4
PTCH1-209ENST00000437951 ECE1P42892 770 aa12.56□□□□□ -0.4
PTCH1-209ENST00000437951 TERF2Q15554 542 aa12.56□□□□□ -0.4
PTCH1-209ENST00000437951 ZNF174Q15697 407 aa12.56□□□□□ -0.4
PTCH1-209ENST00000437951 ICA1LQ8NDH6 482 aa12.56□□□□□ -0.4
PTCH1-209ENST00000437951 PPME1Q9Y570 386 aa12.56□□□□□ -0.4
PTCH1-209ENST00000437951 NUP160Q12769 1436 aa12.56□□□□□ -0.4
PTCH1-209ENST00000437951 TBC1D23Q9NUY8 699 aa12.56□□□□□ -0.4
PTCH1-209ENST00000437951 PCDHB15Q9Y5E8 787 aa12.56□□□□□ -0.4
PTCH1-209ENST00000437951 HIBCHQ6NVY1 386 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-209ENST00000437951 C17orf53Q8N3J3 647 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-209ENST00000437951 LSM14BQ9BX40 385 aaKnown RBP12.55□□□□□ -0.4
PTCH1-209ENST00000437951 IRAK4Q9NWZ3 460 aa12.55□□□□□ -0.4
PTCH1-209ENST00000437951 TRPC5Q9UL62 973 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-209ENST00000437951 TRIM33Q9UPN9 1127 aa12.55□□□□□ -0.4
PTCH1-209ENST00000437951 PI4KAP2A4QPH2 592 aa12.55□□□□□ -0.4
PTCH1-209ENST00000437951 ARHGEF35A5YM69 484 aa12.55□□□□□ -0.4
PTCH1-209ENST00000437951 H0YCG3 227 aa12.55□□□□□ -0.4
PTCH1-209ENST00000437951 PI4KAP1Q8N8J0 262 aa12.55□□□□□ -0.4
PTCH1-209ENST00000437951 SLC17A8Q8NDX2 589 aa12.55□□□□□ -0.4
PTCH1-209ENST00000437951 METTL14Q9HCE5 456 aaKnown RBP12.55□□□□□ -0.4
PTCH1-209ENST00000437951 SNAPC4Q5SXM2 1469 aa12.55□□□□□ -0.4
PTCH1-209ENST00000437951 STXBP3O00186 592 aa12.55□□□□□ -0.4
PTCH1-209ENST00000437951 MDM2Q00987 491 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-209ENST00000437951 DDX42Q86XP3 938 aaKnown RBP eCLIP12.55□□□□□ -0.4
PTCH1-209ENST00000437951 MTBPQ96DY7 904 aa12.55□□□□□ -0.4
PTCH1-209ENST00000437951 SESN1Q9Y6P5 492 aa12.55□□□□□ -0.4
PTCH1-209ENST00000437951 PDE6CP51160 858 aa12.55□□□□□ -0.4
PTCH1-209ENST00000437951 PSMB7Q99436 277 aa12.55□□□□□ -0.4
PTCH1-209ENST00000437951 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.55□□□□□ -0.4
PTCH1-209ENST00000437951 CD2APQ9Y5K6 639 aa12.55□□□□□ -0.4
PTCH1-209ENST00000437951 RPRD2Q5VT52 1461 aaKnown RBP12.55□□□□□ -0.4
PTCH1-209ENST00000437951 MSH2P43246 934 aa12.55□□□□□ -0.4
PTCH1-209ENST00000437951 STAT2P52630 851 aa12.55□□□□□ -0.4
PTCH1-209ENST00000437951 TRMT1LQ7Z2T5 733 aaKnown RBP12.55□□□□□ -0.4
PTCH1-209ENST00000437951 DIS3Q9Y2L1 958 aaKnown RBP12.55□□□□□ -0.4
PTCH1-209ENST00000437951 MMEP08473 750 aa12.55□□□□□ -0.4
PTCH1-209ENST00000437951 POLR2BP30876 1174 aaKnown RBP12.55□□□□□ -0.4
PTCH1-209ENST00000437951 TRPC1P48995 793 aa12.55□□□□□ -0.4
PTCH1-209ENST00000437951 NNTQ13423 1086 aa12.55□□□□□ -0.4
PTCH1-209ENST00000437951 E2F4Q16254 413 aa12.55□□□□□ -0.4
PTCH1-209ENST00000437951 MRPL44Q9H9J2 332 aaKnown RBP12.55□□□□□ -0.4
PTCH1-209ENST00000437951 EPN1Q9Y6I3 576 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-209ENST00000437951 TSHZ3Q63HK5 1081 aa12.55□□□□□ -0.4
PTCH1-209ENST00000437951 KRT39Q6A163 491 aa12.55□□□□□ -0.4
PTCH1-209ENST00000437951 ANKRD13DQ6ZTN6 518 aa12.55□□□□□ -0.4
PTCH1-209ENST00000437951 MRPL50Q8N5N7 158 aaKnown RBP12.55□□□□□ -0.4
PTCH1-209ENST00000437951 ENOX1Q8TC92 643 aaKnown RBP12.55□□□□□ -0.4
PTCH1-209ENST00000437951 SH3GL2Q99962 352 aa12.55□□□□□ -0.4
PTCH1-209ENST00000437951 GTPBP10A4D1E9 387 aaKnown RBP12.54□□□□□ -0.4
PTCH1-209ENST00000437951 LPXNO60711 386 aa12.54□□□□□ -0.4
PTCH1-209ENST00000437951 ADKP55263 362 aaKnown RBP12.54□□□□□ -0.4
PTCH1-209ENST00000437951 GRIN1Q05586 938 aa12.54□□□□□ -0.4
PTCH1-209ENST00000437951 KIF9Q9HAQ2 790 aa12.54□□□□□ -0.4
PTCH1-209ENST00000437951 IQSEC3Q9UPP2 1182 aaPredicted RBP12.54□□□□□ -0.4
PTCH1-209ENST00000437951 PPP2R5CQ13362 524 aa12.54□□□□□ -0.4
PTCH1-209ENST00000437951 GRAMD1BQ3KR37 738 aa12.54□□□□□ -0.4
PTCH1-209ENST00000437951 ZBTB9Q96C00 473 aa12.54□□□□□ -0.4
PTCH1-209ENST00000437951 BFSP1Q12934 665 aa12.54□□□□□ -0.4
PTCH1-209ENST00000437951 CALCRLQ16602 461 aa12.54□□□□□ -0.4
PTCH1-209ENST00000437951 TTLL7Q6ZT98 887 aa12.54□□□□□ -0.4
PTCH1-209ENST00000437951 ZBBXA8MT70 800 aa12.54□□□□□ -0.4
PTCH1-209ENST00000437951 LETM2Q2VYF4 491 aa12.54□□□□□ -0.4
PTCH1-209ENST00000437951 GJC2Q5T442 439 aaPredicted RBP12.54□□□□□ -0.4
PTCH1-209ENST00000437951 ING2Q9H160 280 aa12.54□□□□□ -0.4
PTCH1-209ENST00000437951 CCPG1Q9ULG6 757 aa12.54□□□□□ -0.4
PTCH1-209ENST00000437951 IL1RL1Q01638 556 aa12.54□□□□□ -0.4
PTCH1-209ENST00000437951 THUMPD2Q9BTF0 503 aaKnown RBP12.54□□□□□ -0.4
PTCH1-209ENST00000437951 SNRKQ9NRH2 765 aa12.54□□□□□ -0.4
PTCH1-209ENST00000437951 IQGAP2Q13576 1575 aa12.54□□□□□ -0.4
PTCH1-209ENST00000437951 CEP55Q53EZ4 464 aa12.54□□□□□ -0.4
PTCH1-209ENST00000437951 PARP9Q8IXQ6 854 aa12.54□□□□□ -0.4
PTCH1-209ENST00000437951 IQANK1A0A1B0GTG1 560 aa12.53□□□□□ -0.4
PTCH1-209ENST00000437951 PGRMC1O00264 195 aaKnown RBP12.53□□□□□ -0.4
PTCH1-209ENST00000437951 IFNA8P32881 189 aa12.53□□□□□ -0.4
PTCH1-209ENST00000437951 U2AF1L4Q8WU68 220 aaKnown RBP12.53□□□□□ -0.4
PTCH1-209ENST00000437951 ITGB1BP2Q9UKP3 347 aa12.53□□□□□ -0.4
PTCH1-209ENST00000437951 TMED10P49755 219 aaKnown RBP12.53□□□□□ -0.4
PTCH1-209ENST00000437951 CUL3Q13618 768 aa12.53□□□□□ -0.4
PTCH1-209ENST00000437951 BRDTQ58F21 947 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-209ENST00000437951 LCMT1Q9UIC8 334 aa12.53□□□□□ -0.4
PTCH1-209ENST00000437951 GCNT3O95395 438 aa12.53□□□□□ -0.4
PTCH1-209ENST00000437951 SCG2P13521 617 aa12.53□□□□□ -0.4
PTCH1-209ENST00000437951 BPIFB4P59827 614 aa12.53□□□□□ -0.4
PTCH1-209ENST00000437951 SLC30A9Q6PML9 568 aa12.53□□□□□ -0.4
PTCH1-209ENST00000437951 TSC22D4Q9Y3Q8 395 aa12.53□□□□□ -0.4
PTCH1-209ENST00000437951 EXOC3O60645 756 aa12.53□□□□□ -0.4
PTCH1-209ENST00000437951 CARSP49589 748 aaKnown RBP12.53□□□□□ -0.4
PTCH1-209ENST00000437951 KRR1Q13601 381 aaKnown RBP12.53□□□□□ -0.4
PTCH1-209ENST00000437951 SKAP1Q86WV1 359 aa12.53□□□□□ -0.4
PTCH1-209ENST00000437951 TTC25Q96NG3 672 aa12.53□□□□□ -0.4
PTCH1-209ENST00000437951 TM6SF1Q9BZW5 370 aa12.53□□□□□ -0.4
PTCH1-209ENST00000437951 SOS2Q07890 1332 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-209ENST00000437951 F8W8V4 182 aa12.53□□□□□ -0.4
PTCH1-209ENST00000437951 CRLF3Q8IUI8 442 aa12.53□□□□□ -0.4
PTCH1-209ENST00000437951 ZMYM4Q5VZL5 1548 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms