RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 ZNF713Q8N859 430 aaPredicted RBP24.6■■□□□ 1.53
YBX1-203ENST00000436427 RGS22Q8NE09 1264 aa24.6■■□□□ 1.53
YBX1-203ENST00000436427 CCDC148Q8NFR7 591 aa24.6■■□□□ 1.53
YBX1-203ENST00000436427 CCDC12Q8WUD4 166 aaPredicted RBP24.6■■□□□ 1.53
YBX1-203ENST00000436427 COA7Q96BR5 231 aa24.6■■□□□ 1.53
YBX1-203ENST00000436427 AGTPBP1Q9UPW5 1226 aa24.6■■□□□ 1.53
YBX1-203ENST00000436427 CTDP1Q9Y5B0 961 aaPredicted RBP24.6■■□□□ 1.53
YBX1-203ENST00000436427 GNL2Q13823 731 aaKnown RBP24.59■■□□□ 1.53
YBX1-203ENST00000436427 COG2Q14746 738 aa24.59■■□□□ 1.53
YBX1-203ENST00000436427 SAFBQ15424 915 aaKnown RBP eCLIP24.59■■□□□ 1.53
YBX1-203ENST00000436427 TYW1BQ6NUM6 668 aa24.59■■□□□ 1.53
YBX1-203ENST00000436427 RGMBQ6NW40 437 aa24.59■■□□□ 1.53
YBX1-203ENST00000436427 FBXO11Q86XK2 927 aa24.59■■□□□ 1.53
YBX1-203ENST00000436427 PHF20Q9BVI0 1012 aa24.59■■□□□ 1.53
YBX1-203ENST00000436427 AMNQ9BXJ7 453 aa24.59■■□□□ 1.53
YBX1-203ENST00000436427 CETPP11597 493 aa24.58■■□□□ 1.53
YBX1-203ENST00000436427 MOGSQ13724 837 aa24.58■■□□□ 1.53
YBX1-203ENST00000436427 USH1GQ495M9 461 aa24.58■■□□□ 1.53
YBX1-203ENST00000436427 RASAL3Q86YV0 1011 aa24.58■■□□□ 1.53
YBX1-203ENST00000436427 ATG4CQ96DT6 458 aa24.58■■□□□ 1.53
YBX1-203ENST00000436427 PCDHA1Q9Y5I3 950 aa24.58■■□□□ 1.53
YBX1-203ENST00000436427 DSG3P32926 999 aa24.57■■□□□ 1.52
YBX1-203ENST00000436427 MS4A4AQ96JQ5 239 aa24.57■■□□□ 1.52
YBX1-203ENST00000436427 BRMS1Q9HCU9 246 aa24.57■■□□□ 1.52
YBX1-203ENST00000436427 PARP14Q460N5 1801 aa24.57■■□□□ 1.52
YBX1-203ENST00000436427 CCL15-CCL14A0A0B4J2E2 113 aa24.56■■□□□ 1.52
YBX1-203ENST00000436427 ZBED4O75132 1171 aa24.56■■□□□ 1.52
YBX1-203ENST00000436427 HOXA7P31268 230 aaPredicted RBP24.56■■□□□ 1.52
YBX1-203ENST00000436427 IRX3P78415 501 aaPredicted RBP24.56■■□□□ 1.52
YBX1-203ENST00000436427 PABPC4Q13310 644 aaKnown RBP eCLIP24.56■■□□□ 1.521e-323■■■■□ 21
YBX1-203ENST00000436427 CCL15Q16663 113 aa24.56■■□□□ 1.52
YBX1-203ENST00000436427 DIS3L2Q8IYB7 885 aaKnown RBP24.56■■□□□ 1.52
YBX1-203ENST00000436427 TNPO1Q92973 898 aaKnown RBP24.56■■□□□ 1.52
YBX1-203ENST00000436427 SLC38A10Q9HBR0 1119 aa24.56■■□□□ 1.52
YBX1-203ENST00000436427 HOXC10Q9NYD6 342 aa24.56■■□□□ 1.52
YBX1-203ENST00000436427 VWA5AO00534 786 aa24.56■■□□□ 1.52
YBX1-203ENST00000436427 CALML3P27482 149 aa24.56■■□□□ 1.52
YBX1-203ENST00000436427 KRT2P35908 639 aa24.56■■□□□ 1.52
YBX1-203ENST00000436427 KIF23Q02241 960 aaPredicted RBP24.56■■□□□ 1.52
YBX1-203ENST00000436427 FOXD4L6Q3SYB3 417 aaPredicted RBP24.56■■□□□ 1.52
YBX1-203ENST00000436427 GPAT2Q6NUI2 795 aa24.56■■□□□ 1.52
YBX1-203ENST00000436427 PPP1R18Q6NYC8 613 aa24.56■■□□□ 1.52
YBX1-203ENST00000436427 FOXD4L3Q6VB84 417 aaPredicted RBP24.56■■□□□ 1.52
YBX1-203ENST00000436427 FAM177A1Q8N128 213 aaPredicted RBP24.56■■□□□ 1.52
YBX1-203ENST00000436427 SMCO2A6NFE2 343 aa24.55■■□□□ 1.52
YBX1-203ENST00000436427 SPDYE16A6NNV3 312 aaPredicted RBP24.55■■□□□ 1.52
YBX1-203ENST00000436427 FDX1P10109 184 aa24.55■■□□□ 1.52
YBX1-203ENST00000436427 RESTQ13127 1097 aa24.55■■□□□ 1.52
YBX1-203ENST00000436427 CPXCR1Q8N123 301 aa24.55■■□□□ 1.52
YBX1-203ENST00000436427 ZSCAN16Q9H4T2 348 aaPredicted RBP24.55■■□□□ 1.52
YBX1-203ENST00000436427 MYPNQ86TC9 1320 aa24.55■■□□□ 1.52
YBX1-203ENST00000436427 BTBD18B2RXH4 712 aa24.54■■□□□ 1.52
YBX1-203ENST00000436427 KIF28PB7ZC32 967 aa24.54■■□□□ 1.52
YBX1-203ENST00000436427 TAL1P17542 331 aaPredicted RBP24.54■■□□□ 1.52
YBX1-203ENST00000436427 OSBPP22059 807 aa24.54■■□□□ 1.52
YBX1-203ENST00000436427 TRAF1Q13077 416 aa24.54■■□□□ 1.52
YBX1-203ENST00000436427 BRI3BPQ8WY22 251 aa24.54■■□□□ 1.52
YBX1-203ENST00000436427 ZMYND12Q9H0C1 365 aa24.54■■□□□ 1.52
YBX1-203ENST00000436427 ASCC2Q9H1I8 757 aaPredicted RBP24.54■■□□□ 1.52
YBX1-203ENST00000436427 C6orf50Q9HD87 102 aa24.54■■□□□ 1.52
YBX1-203ENST00000436427 CCPG1Q9ULG6 757 aa24.54■■□□□ 1.52
YBX1-203ENST00000436427 PCDHA4Q9UN74 947 aa24.54■■□□□ 1.52
YBX1-203ENST00000436427 RLFQ13129 1914 aa24.54■■□□□ 1.52
YBX1-203ENST00000436427 ICAM1P05362 532 aa24.53■■□□□ 1.52
YBX1-203ENST00000436427 SLC10A3P09131 477 aa24.53■■□□□ 1.52
YBX1-203ENST00000436427 PAXIP1Q6ZW49 1069 aaPredicted RBP24.53■■□□□ 1.52
YBX1-203ENST00000436427 OXER1Q8TDS5 423 aa24.53■■□□□ 1.52
YBX1-203ENST00000436427 AGBL1Q96MI9 1066 aa24.53■■□□□ 1.52
YBX1-203ENST00000436427 RAVER2Q9HCJ3 691 aaKnown RBP24.53■■□□□ 1.52
YBX1-203ENST00000436427 ATP6V1DQ9Y5K8 247 aa24.53■■□□□ 1.52
YBX1-203ENST00000436427 GNA11P29992 359 aa24.52■■□□□ 1.52
YBX1-203ENST00000436427 ADCY7P51828 1080 aa24.52■■□□□ 1.52
YBX1-203ENST00000436427 NR5A1Q13285 461 aa24.52■■□□□ 1.52
YBX1-203ENST00000436427 NPY5RQ15761 445 aa24.52■■□□□ 1.52
YBX1-203ENST00000436427 GALNT17Q6IS24 598 aa24.52■■□□□ 1.52
YBX1-203ENST00000436427 BLIDQ8IZY5 108 aa24.52■■□□□ 1.52
YBX1-203ENST00000436427 P2RX7Q99572 595 aaKnown RBP24.52■■□□□ 1.52
YBX1-203ENST00000436427 FOXP1Q9H334 677 aaPredicted RBP24.52■■□□□ 1.52
YBX1-203ENST00000436427 ADAMTS5Q9UNA0 930 aa24.52■■□□□ 1.52
YBX1-203ENST00000436427 ZNF536O15090 1300 aa24.52■■□□□ 1.52
YBX1-203ENST00000436427 ESYT2A0FGR8 921 aa24.51■■□□□ 1.51
YBX1-203ENST00000436427 BTBD19C9JJ37 291 aa24.51■■□□□ 1.51
YBX1-203ENST00000436427 NFKBIBQ15653 356 aa24.51■■□□□ 1.51
YBX1-203ENST00000436427 CCDC102AQ96A19 550 aa24.51■■□□□ 1.51
YBX1-203ENST00000436427 PDHXO00330 501 aa24.51■■□□□ 1.51
YBX1-203ENST00000436427 U2AF2P26368 475 aaKnown RBP eCLIP24.51■■□□□ 1.517e-18■■■■□ 25
YBX1-203ENST00000436427 GRM1Q13255 1194 aa24.51■■□□□ 1.51
YBX1-203ENST00000436427 FAM173BQ6P4H8 233 aa24.51■■□□□ 1.51
YBX1-203ENST00000436427 BRAPQ7Z569 592 aa24.51■■□□□ 1.51
YBX1-203ENST00000436427 DAGLBQ8NCG7 672 aa24.51■■□□□ 1.51
YBX1-203ENST00000436427 BICD2Q8TD16 824 aa24.51■■□□□ 1.51
YBX1-203ENST00000436427 CUL5Q93034 780 aa24.51■■□□□ 1.51
YBX1-203ENST00000436427 HHIPL1Q96JK4 782 aa24.51■■□□□ 1.51
YBX1-203ENST00000436427 PSTPIP2Q9H939 334 aa24.51■■□□□ 1.51
YBX1-203ENST00000436427 PNMA3Q9UL41 463 aa24.51■■□□□ 1.51
YBX1-203ENST00000436427 ABCB11O95342 1321 aa24.5■■□□□ 1.51
YBX1-203ENST00000436427 ADAMTS3O15072 1205 aa24.5■■□□□ 1.51
YBX1-203ENST00000436427 APLP1P51693 650 aa24.5■■□□□ 1.51
YBX1-203ENST00000436427 HERVK_113P62684 666 aa24.5■■□□□ 1.51
YBX1-203ENST00000436427 ANKRD23Q86SG2 305 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms