RNA–Protein interactions for RNA: ENST00000434944.1

LINC00475-206, long intergenic non-protein coding RNA 475, humanhuman

TSL 3 BASIC

Gene LINC00475, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-206ENST00000434944 ATP2A2P16615 1042 aaKnown RBP11.74□□□□□ -0.53
LINC00475-206ENST00000434944 POU3F3P20264 500 aaPredicted RBP11.74□□□□□ -0.53
LINC00475-206ENST00000434944 POLA2Q14181 598 aa11.74□□□□□ -0.53
LINC00475-206ENST00000434944 TTLL4Q14679 1199 aa11.74□□□□□ -0.53
LINC00475-206ENST00000434944 SPRED2Q7Z698 418 aa11.74□□□□□ -0.53
LINC00475-206ENST00000434944 MSL3Q8N5Y2 521 aaKnown RBP11.74□□□□□ -0.53
LINC00475-206ENST00000434944 SLC43A3Q8NBI5 491 aa11.74□□□□□ -0.53
LINC00475-206ENST00000434944 SPC25Q9HBM1 224 aa11.74□□□□□ -0.53
LINC00475-206ENST00000434944 DCP1AQ9NPI6 582 aaPredicted RBP11.74□□□□□ -0.53
LINC00475-206ENST00000434944 COG5Q9UP83 839 aa11.74□□□□□ -0.53
LINC00475-206ENST00000434944 ASTN1O14525 1302 aa11.74□□□□□ -0.53
LINC00475-206ENST00000434944 MRE11P49959 708 aa11.73□□□□□ -0.53
LINC00475-206ENST00000434944 RARSP54136 660 aaKnown RBP11.73□□□□□ -0.53
LINC00475-206ENST00000434944 TMEM67Q5HYA8 995 aa11.73□□□□□ -0.53
LINC00475-206ENST00000434944 SNRNP48Q6IEG0 339 aaKnown RBP11.73□□□□□ -0.53
LINC00475-206ENST00000434944 TRMT2AQ8IZ69 625 aaKnown RBP11.73□□□□□ -0.53
LINC00475-206ENST00000434944 LCORLQ8N3X6 602 aa11.73□□□□□ -0.53
LINC00475-206ENST00000434944 NUP88Q99567 741 aaPredicted RBP11.73□□□□□ -0.53
LINC00475-206ENST00000434944 CRNKL1Q9BZJ0 848 aaKnown RBP11.73□□□□□ -0.53
LINC00475-206ENST00000434944 SH2D4AQ9H788 454 aa11.73□□□□□ -0.53
LINC00475-206ENST00000434944 PI4K2BG5E9Z4 385 aa11.72□□□□□ -0.53
LINC00475-206ENST00000434944 PRKAB2O43741 272 aa11.72□□□□□ -0.53
LINC00475-206ENST00000434944 B4GALT4O60513 344 aa11.72□□□□□ -0.53
LINC00475-206ENST00000434944 PDE6AP16499 860 aa11.72□□□□□ -0.53
LINC00475-206ENST00000434944 COPB2P35606 906 aa11.72□□□□□ -0.53
LINC00475-206ENST00000434944 PSMC6P62333 389 aa11.72□□□□□ -0.53
LINC00475-206ENST00000434944 ITGA7Q13683 1181 aa11.72□□□□□ -0.53
LINC00475-206ENST00000434944 ARMCX2Q7L311 632 aa11.72□□□□□ -0.53
LINC00475-206ENST00000434944 CPXCR1Q8N123 301 aa11.72□□□□□ -0.53
LINC00475-206ENST00000434944 SSH3Q8TE77 659 aa11.72□□□□□ -0.53
LINC00475-206ENST00000434944 ARNTL2Q8WYA1 636 aa11.72□□□□□ -0.53
LINC00475-206ENST00000434944 HLA-CQ95604 372 aa11.72□□□□□ -0.53
LINC00475-206ENST00000434944 AGBL1Q96MI9 1066 aa11.72□□□□□ -0.53
LINC00475-206ENST00000434944 TEX13BQ9BXU2 312 aa11.72□□□□□ -0.53
LINC00475-206ENST00000434944 KATNBL1Q9H079 304 aa11.72□□□□□ -0.53
LINC00475-206ENST00000434944 ABHD16BQ9H3Z7 469 aa11.72□□□□□ -0.53
LINC00475-206ENST00000434944 SWAP70Q9UH65 585 aa11.72□□□□□ -0.53
LINC00475-206ENST00000434944 DDX49Q9Y6V7 483 aaKnown RBP11.72□□□□□ -0.53
LINC00475-206ENST00000434944 ZNF532Q9HCE3 1301 aa11.71□□□□□ -0.53
LINC00475-206ENST00000434944 TRIP12Q14669 1992 aaPredicted RBP11.71□□□□□ -0.53
LINC00475-206ENST00000434944 PTPRSQ13332 1948 aa11.71□□□□□ -0.53
LINC00475-206ENST00000434944 TRIM27P14373 513 aa11.71□□□□□ -0.53
LINC00475-206ENST00000434944 CDK8P49336 464 aa11.71□□□□□ -0.53
LINC00475-206ENST00000434944 TAP1Q03518 808 aa11.71□□□□□ -0.53
LINC00475-206ENST00000434944 SLFNL1Q499Z3 407 aa11.71□□□□□ -0.53
LINC00475-206ENST00000434944 NOL8Q76FK4 1167 aaKnown RBP11.71□□□□□ -0.53
LINC00475-206ENST00000434944 DEFB128Q7Z7B8 93 aa11.71□□□□□ -0.53
LINC00475-206ENST00000434944 ZNF467Q7Z7K2 595 aaPredicted RBP11.71□□□□□ -0.53
LINC00475-206ENST00000434944 CCDC144CPQ8IYA2 1237 aa11.71□□□□□ -0.53
LINC00475-206ENST00000434944 RPUSD2Q8IZ73 545 aaKnown RBP11.71□□□□□ -0.53
LINC00475-206ENST00000434944 ARHGAP45Q92619 1136 aa11.71□□□□□ -0.53
LINC00475-206ENST00000434944 CLUAP1Q96AJ1 413 aa11.71□□□□□ -0.53
LINC00475-206ENST00000434944 SNX27Q96L92 541 aa11.71□□□□□ -0.53
LINC00475-206ENST00000434944 C1orf115Q9H7X2 142 aa11.71□□□□□ -0.53
LINC00475-206ENST00000434944 ARMT1Q9H993 441 aa11.71□□□□□ -0.53
LINC00475-206ENST00000434944 COL4A4P53420 1690 aaPredicted RBP11.71□□□□□ -0.54
LINC00475-206ENST00000434944 ZNF318Q5VUA4 2279 aa11.7□□□□□ -0.54
LINC00475-206ENST00000434944 LPXNO60711 386 aa11.7□□□□□ -0.54
LINC00475-206ENST00000434944 CT47B1P0C2W7 299 aaPredicted RBP11.7□□□□□ -0.54
LINC00475-206ENST00000434944 CYP2C9P11712 490 aa11.7□□□□□ -0.54
LINC00475-206ENST00000434944 NKX3-2P78367 333 aa11.7□□□□□ -0.54
LINC00475-206ENST00000434944 ATP8B2P98198 1209 aa11.7□□□□□ -0.54
LINC00475-206ENST00000434944 CNTN2Q02246 1040 aa11.7□□□□□ -0.54
LINC00475-206ENST00000434944 GRB10Q13322 594 aa11.7□□□□□ -0.54
LINC00475-206ENST00000434944 TMEM63BQ5T3F8 832 aa11.7□□□□□ -0.54
LINC00475-206ENST00000434944 SLC9C2Q5TAH2 1124 aa11.7□□□□□ -0.54
LINC00475-206ENST00000434944 CCDC17Q96LX7 622 aa11.7□□□□□ -0.54
LINC00475-206ENST00000434944 SLF1Q9BQI6 1058 aa11.7□□□□□ -0.54
LINC00475-206ENST00000434944 RAVER2Q9HCJ3 691 aaKnown RBP11.7□□□□□ -0.54
LINC00475-206ENST00000434944 GOPCQ9HD26 462 aa11.7□□□□□ -0.54
LINC00475-206ENST00000434944 TCRBV5S4A2TA0A5A2 114 aa11.69□□□□□ -0.54
LINC00475-206ENST00000434944 PRR33A8MZF0 331 aa11.69□□□□□ -0.54
LINC00475-206ENST00000434944 RBAK-RBAKDNI3L0D1 243 aa11.69□□□□□ -0.54
LINC00475-206ENST00000434944 TNFAIP2Q03169 654 aa11.69□□□□□ -0.54
LINC00475-206ENST00000434944 FSCN1Q16658 493 aaKnown RBP11.69□□□□□ -0.54
LINC00475-206ENST00000434944 ANKRD35Q8N283 1001 aa11.69□□□□□ -0.54
LINC00475-206ENST00000434944 UIMC1Q96RL1 719 aa11.69□□□□□ -0.54
LINC00475-206ENST00000434944 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.69□□□□□ -0.54
LINC00475-206ENST00000434944 KANSL2Q9H9L4 492 aa11.69□□□□□ -0.54
LINC00475-206ENST00000434944 TRMT13Q9NUP7 481 aaKnown RBP11.69□□□□□ -0.54
LINC00475-206ENST00000434944 GNEQ9Y223 722 aaKnown RBP11.69□□□□□ -0.54
LINC00475-206ENST00000434944 NOP58Q9Y2X3 529 aaKnown RBP11.69□□□□□ -0.54
LINC00475-206ENST00000434944 MYO7AQ13402 2215 aa11.68□□□□□ -0.54
LINC00475-206ENST00000434944 GREB1LQ9C091 1923 aaPredicted RBP11.68□□□□□ -0.54
LINC00475-206ENST00000434944 MYH4Q9Y623 1939 aa11.68□□□□□ -0.54
LINC00475-206ENST00000434944 USP17L12C9JPN9 530 aa11.68□□□□□ -0.54
LINC00475-206ENST00000434944 USP17L21D6R901 530 aa11.68□□□□□ -0.54
LINC00475-206ENST00000434944 DYNC1LI2O43237 492 aaPredicted RBP11.68□□□□□ -0.54
LINC00475-206ENST00000434944 ABCB7O75027 752 aa11.68□□□□□ -0.54
LINC00475-206ENST00000434944 CABYRO75952 493 aa11.68□□□□□ -0.54
LINC00475-206ENST00000434944 SMPD1P17405 629 aa11.68□□□□□ -0.54
LINC00475-206ENST00000434944 NHLH1Q02575 133 aa11.68□□□□□ -0.54
LINC00475-206ENST00000434944 C12orf60Q5U649 245 aa11.68□□□□□ -0.54
LINC00475-206ENST00000434944 C16orf86Q6ZW13 317 aa11.68□□□□□ -0.54
LINC00475-206ENST00000434944 TLK2Q86UE8 772 aa11.68□□□□□ -0.54
LINC00475-206ENST00000434944 PPP1R13LQ8WUF5 828 aa11.68□□□□□ -0.54
LINC00475-206ENST00000434944 ALDH8A1Q9H2A2 487 aaPredicted RBP11.68□□□□□ -0.54
LINC00475-206ENST00000434944 PDGFCQ9NRA1 345 aa11.68□□□□□ -0.54
LINC00475-206ENST00000434944 CHGBP05060 677 aa11.67□□□□□ -0.54
LINC00475-206ENST00000434944 TMED8Q6PL24 325 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms