RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 SAMD1Q6SPF0 538 aaPredicted RBP30.49■■■□□ 2.47
TMEM248-205ENST00000433271 CCDC12Q8WUD4 166 aaPredicted RBP30.49■■■□□ 2.47
TMEM248-205ENST00000433271 FOXD4L4Q8WXT5 416 aaPredicted RBP30.49■■■□□ 2.47
TMEM248-205ENST00000433271 HOXC10Q9NYD6 342 aa30.49■■■□□ 2.47
TMEM248-205ENST00000433271 CCDC148Q8NFR7 591 aa30.48■■■□□ 2.47
TMEM248-205ENST00000433271 AMNQ9BXJ7 453 aa30.48■■■□□ 2.47
TMEM248-205ENST00000433271 MYPNQ86TC9 1320 aa30.48■■■□□ 2.47
TMEM248-205ENST00000433271 F13A1P00488 732 aa30.47■■■□□ 2.47
TMEM248-205ENST00000433271 DSG3P32926 999 aa30.47■■■□□ 2.47
TMEM248-205ENST00000433271 TYW1BQ6NUM6 668 aa30.47■■■□□ 2.47
TMEM248-205ENST00000433271 FBXO11Q86XK2 927 aa30.47■■■□□ 2.47
TMEM248-205ENST00000433271 SLC38A10Q9HBR0 1119 aa30.47■■■□□ 2.47
TMEM248-205ENST00000433271 NAPAP54920 295 aa30.47■■■□□ 2.47
TMEM248-205ENST00000433271 NLRP5P59047 1200 aa30.47■■■□□ 2.47
TMEM248-205ENST00000433271 MKRN3Q13064 507 aaKnown RBP30.47■■■□□ 2.47
TMEM248-205ENST00000433271 TRAF1Q13077 416 aa30.47■■■□□ 2.47
TMEM248-205ENST00000433271 SAFBQ15424 915 aaKnown RBP eCLIP30.47■■■□□ 2.47
TMEM248-205ENST00000433271 MCTP1Q6DN14 999 aa30.47■■■□□ 2.47
TMEM248-205ENST00000433271 RASAL3Q86YV0 1011 aa30.47■■■□□ 2.47
TMEM248-205ENST00000433271 ABT1Q9ULW3 272 aaKnown RBP30.47■■■□□ 2.47
TMEM248-205ENST00000433271 ADAMTS5Q9UNA0 930 aa30.47■■■□□ 2.47
TMEM248-205ENST00000433271 PCDHA1Q9Y5I3 950 aa30.47■■■□□ 2.47
TMEM248-205ENST00000433271 CALML3P27482 149 aa30.46■■■□□ 2.47
TMEM248-205ENST00000433271 PABPC4Q13310 644 aaKnown RBP eCLIP30.46■■■□□ 2.47
TMEM248-205ENST00000433271 GPAT2Q6NUI2 795 aa30.46■■■□□ 2.47
TMEM248-205ENST00000433271 PPP1R18Q6NYC8 613 aa30.46■■■□□ 2.47
TMEM248-205ENST00000433271 COA7Q96BR5 231 aa30.46■■■□□ 2.47
TMEM248-205ENST00000433271 HHIPL1Q96JK4 782 aa30.46■■■□□ 2.47
TMEM248-205ENST00000433271 VWA5AO00534 786 aa30.45■■■□□ 2.47
TMEM248-205ENST00000433271 GALNT17Q6IS24 598 aa30.45■■■□□ 2.47
TMEM248-205ENST00000433271 FERMT3Q86UX7 667 aa30.45■■■□□ 2.47
TMEM248-205ENST00000433271 ATG4CQ96DT6 458 aa30.45■■■□□ 2.47
TMEM248-205ENST00000433271 ZMYND12Q9H0C1 365 aa30.45■■■□□ 2.47
TMEM248-205ENST00000433271 ZSCAN16Q9H4T2 348 aaPredicted RBP30.45■■■□□ 2.47
TMEM248-205ENST00000433271 PARP14Q460N5 1801 aa30.45■■■□□ 2.47
TMEM248-205ENST00000433271 RLFQ13129 1914 aa30.45■■■□□ 2.46
TMEM248-205ENST00000433271 ESYT2A0FGR8 921 aa30.44■■■□□ 2.46
TMEM248-205ENST00000433271 ZBED4O75132 1171 aa30.44■■■□□ 2.46
TMEM248-205ENST00000433271 CCDC174Q6PII3 467 aa30.44■■■□□ 2.46
TMEM248-205ENST00000433271 CCL15-CCL14A0A0B4J2E2 113 aa30.44■■■□□ 2.46
TMEM248-205ENST00000433271 KIF23Q02241 960 aaPredicted RBP30.44■■■□□ 2.46
TMEM248-205ENST00000433271 NPY5RQ15761 445 aa30.44■■■□□ 2.46
TMEM248-205ENST00000433271 CCL15Q16663 113 aa30.44■■■□□ 2.46
TMEM248-205ENST00000433271 DIS3L2Q8IYB7 885 aaKnown RBP30.44■■■□□ 2.46
TMEM248-205ENST00000433271 TNPO1Q92973 898 aaKnown RBP30.44■■■□□ 2.46
TMEM248-205ENST00000433271 PNMA2Q9UL42 364 aa30.44■■■□□ 2.46
TMEM248-205ENST00000433271 ICAM1P05362 532 aa30.43■■■□□ 2.46
TMEM248-205ENST00000433271 IRX3P78415 501 aaPredicted RBP30.43■■■□□ 2.46
TMEM248-205ENST00000433271 RESTQ13127 1097 aa30.43■■■□□ 2.46
TMEM248-205ENST00000433271 BRI3BPQ8WY22 251 aa30.43■■■□□ 2.46
TMEM248-205ENST00000433271 CCDC102AQ96A19 550 aa30.43■■■□□ 2.46
TMEM248-205ENST00000433271 FOXP1Q9H334 677 aaPredicted RBP30.43■■■□□ 2.46
TMEM248-205ENST00000433271 BRMS1Q9HCU9 246 aa30.43■■■□□ 2.46
TMEM248-205ENST00000433271 SMCO2A6NFE2 343 aa30.42■■■□□ 2.46
TMEM248-205ENST00000433271 SPDYE16A6NNV3 312 aaPredicted RBP30.42■■■□□ 2.46
TMEM248-205ENST00000433271 U2AF2P26368 475 aaKnown RBP eCLIP30.42■■■□□ 2.462e-8■■□□□ 13.4
TMEM248-205ENST00000433271 ASCC2Q9H1I8 757 aaPredicted RBP30.42■■■□□ 2.46
TMEM248-205ENST00000433271 C6orf50Q9HD87 102 aa30.42■■■□□ 2.46
TMEM248-205ENST00000433271 PCDHA4Q9UN74 947 aa30.42■■■□□ 2.46
TMEM248-205ENST00000433271 CTDP1Q9Y5B0 961 aaPredicted RBP30.42■■■□□ 2.46
TMEM248-205ENST00000433271 ATP6V1DQ9Y5K8 247 aa30.42■■■□□ 2.46
TMEM248-205ENST00000433271 ZNF536O15090 1300 aa30.42■■■□□ 2.46
TMEM248-205ENST00000433271 BTBD18B2RXH4 712 aa30.41■■■□□ 2.46
TMEM248-205ENST00000433271 SLC10A3P09131 477 aa30.41■■■□□ 2.46
TMEM248-205ENST00000433271 GNA11P29992 359 aa30.41■■■□□ 2.46
TMEM248-205ENST00000433271 KRT2P35908 639 aa30.41■■■□□ 2.46
TMEM248-205ENST00000433271 USH1GQ495M9 461 aa30.41■■■□□ 2.46
TMEM248-205ENST00000433271 SLC45A1Q9Y2W3 748 aa30.41■■■□□ 2.46
TMEM248-205ENST00000433271 OSBPP22059 807 aa30.4■■■□□ 2.46
TMEM248-205ENST00000433271 GNL2Q13823 731 aaKnown RBP30.4■■■□□ 2.46
TMEM248-205ENST00000433271 DAGLBQ8NCG7 672 aa30.4■■■□□ 2.46
TMEM248-205ENST00000433271 P2RX7Q99572 595 aaKnown RBP30.4■■■□□ 2.46
TMEM248-205ENST00000433271 TESPA1A2RU30 521 aaPredicted RBP30.4■■■□□ 2.46
TMEM248-205ENST00000433271 KIF28PB7ZC32 967 aa30.4■■■□□ 2.46
TMEM248-205ENST00000433271 OAZ1P54368 228 aa30.4■■■□□ 2.46
TMEM248-205ENST00000433271 ANKRD23Q86SG2 305 aa30.4■■■□□ 2.46
TMEM248-205ENST00000433271 BLIDQ8IZY5 108 aa30.4■■■□□ 2.46
TMEM248-205ENST00000433271 REPS2Q8NFH8 660 aa30.4■■■□□ 2.46
TMEM248-205ENST00000433271 OXER1Q8TDS5 423 aa30.4■■■□□ 2.46
TMEM248-205ENST00000433271 LBX2Q6XYB7 198 aa30.39■■■□□ 2.46
TMEM248-205ENST00000433271 BRAPQ7Z569 592 aa30.39■■■□□ 2.46
TMEM248-205ENST00000433271 BICD2Q8TD16 824 aa30.39■■■□□ 2.46
TMEM248-205ENST00000433271 CCPG1Q9ULG6 757 aa30.39■■■□□ 2.46
TMEM248-205ENST00000433271 MANSC4A6NHS7 340 aaPredicted RBP30.38■■■□□ 2.45
TMEM248-205ENST00000433271 BTBD19C9JJ37 291 aa30.38■■■□□ 2.45
TMEM248-205ENST00000433271 ATP2A1O14983 1001 aa30.38■■■□□ 2.45
TMEM248-205ENST00000433271 ADCY7P51828 1080 aa30.38■■■□□ 2.45
TMEM248-205ENST00000433271 CPXCR1Q8N123 301 aa30.38■■■□□ 2.45
TMEM248-205ENST00000433271 MB21D1Q8N884 522 aa30.38■■■□□ 2.45
TMEM248-205ENST00000433271 AGBL1Q96MI9 1066 aa30.38■■■□□ 2.45
TMEM248-205ENST00000433271 GLT8D2Q9H1C3 349 aa30.38■■■□□ 2.45
TMEM248-205ENST00000433271 PSTPIP2Q9H939 334 aa30.38■■■□□ 2.45
TMEM248-205ENST00000433271 RAVER2Q9HCJ3 691 aaKnown RBP30.38■■■□□ 2.45
TMEM248-205ENST00000433271 RIC8AQ9NPQ8 531 aa30.38■■■□□ 2.45
TMEM248-205ENST00000433271 PNMA3Q9UL41 463 aa30.38■■■□□ 2.45
TMEM248-205ENST00000433271 ABCB11O95342 1321 aa30.37■■■□□ 2.45
TMEM248-205ENST00000433271 FAM155AB1AL88 458 aaPredicted RBP30.37■■■□□ 2.45
TMEM248-205ENST00000433271 APLP1P51693 650 aa30.37■■■□□ 2.45
TMEM248-205ENST00000433271 MRPL12P52815 198 aaKnown RBP30.37■■■□□ 2.45
TMEM248-205ENST00000433271 NR5A1Q13285 461 aa30.37■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms