RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 RANBP6O60518 1105 aaKnown RBP16.92■□□□□ 0.3
SMARCE1-205ENST00000431889 COPB2P35606 906 aa16.92■□□□□ 0.3
SMARCE1-205ENST00000431889 ACVR2BQ13705 512 aa16.92■□□□□ 0.3
SMARCE1-205ENST00000431889 KCNA10Q16322 511 aa16.92■□□□□ 0.3
SMARCE1-205ENST00000431889 LRRFIP1Q32MZ4 808 aaKnown RBP16.92■□□□□ 0.3
SMARCE1-205ENST00000431889 GUCD1Q96NT3 240 aa16.92■□□□□ 0.3
SMARCE1-205ENST00000431889 TOMM22Q9NS69 142 aa16.92■□□□□ 0.3
SMARCE1-205ENST00000431889 ZBTB47Q9UFB7 747 aaPredicted RBP16.92■□□□□ 0.3
SMARCE1-205ENST00000431889 A0A0D9SFI3 127 aa16.91■□□□□ 0.3
SMARCE1-205ENST00000431889 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.91■□□□□ 0.3
SMARCE1-205ENST00000431889 SLC3A2P08195 630 aaKnown RBP16.91■□□□□ 0.3
SMARCE1-205ENST00000431889 C6orf222P0C671 652 aaPredicted RBP16.91■□□□□ 0.3
SMARCE1-205ENST00000431889 ALAS1P13196 640 aa16.91■□□□□ 0.3
SMARCE1-205ENST00000431889 SLC16A2P36021 539 aa16.91■□□□□ 0.3
SMARCE1-205ENST00000431889 SLC1A4P43007 532 aa16.91■□□□□ 0.3
SMARCE1-205ENST00000431889 STAT2P52630 851 aa16.91■□□□□ 0.3
SMARCE1-205ENST00000431889 ACLYP53396 1101 aa16.91■□□□□ 0.3
SMARCE1-205ENST00000431889 HAND2P61296 217 aa16.91■□□□□ 0.3
SMARCE1-205ENST00000431889 CCDC144BQ3MJ40 725 aa16.91■□□□□ 0.3
SMARCE1-205ENST00000431889 CCDC144CPQ8IYA2 1237 aa16.91■□□□□ 0.3
SMARCE1-205ENST00000431889 LNPKQ9C0E8 428 aa16.91■□□□□ 0.3
SMARCE1-205ENST00000431889 FAM184BQ9ULE4 1060 aa16.91■□□□□ 0.3
SMARCE1-205ENST00000431889 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.91■□□□□ 0.3
SMARCE1-205ENST00000431889 ZNF536O15090 1300 aa16.9■□□□□ 0.3
SMARCE1-205ENST00000431889 FRMPD2Q68DX3 1309 aaPredicted RBP16.9■□□□□ 0.3
SMARCE1-205ENST00000431889 CLTBP09497 229 aa16.9■□□□□ 0.3
SMARCE1-205ENST00000431889 BEX3Q00994 111 aa16.9■□□□□ 0.3
SMARCE1-205ENST00000431889 MUM1L1Q5H9M0 696 aa16.9■□□□□ 0.3
SMARCE1-205ENST00000431889 TMEM63BQ5T3F8 832 aa16.9■□□□□ 0.3
SMARCE1-205ENST00000431889 TTBK2Q6IQ55 1244 aa16.9■□□□□ 0.3
SMARCE1-205ENST00000431889 ARMCX2Q7L311 632 aa16.9■□□□□ 0.3
SMARCE1-205ENST00000431889 EEPD1Q7L9B9 569 aa16.9■□□□□ 0.3
SMARCE1-205ENST00000431889 VTI1AQ96AJ9 217 aa16.9■□□□□ 0.3
SMARCE1-205ENST00000431889 STARD7Q9NQZ5 370 aa16.9■□□□□ 0.3
SMARCE1-205ENST00000431889 RNF146Q9NTX7 359 aa16.9■□□□□ 0.3
SMARCE1-205ENST00000431889 TMEM39AQ9NV64 488 aa16.9■□□□□ 0.3
SMARCE1-205ENST00000431889 PLIN4Q96Q06 1357 aa16.9■□□□□ 0.3
SMARCE1-205ENST00000431889 SYNGAP1Q96PV0 1343 aa16.9■□□□□ 0.3
SMARCE1-205ENST00000431889 SOWAHBA6NEL2 793 aa16.89■□□□□ 0.3
SMARCE1-205ENST00000431889 POTEB2H3BUK9 544 aa16.89■□□□□ 0.3
SMARCE1-205ENST00000431889 ATP2A1O14983 1001 aa16.89■□□□□ 0.3
SMARCE1-205ENST00000431889 PDE1AP54750 535 aa16.89■□□□□ 0.3
SMARCE1-205ENST00000431889 CCDC96Q2M329 555 aa16.89■□□□□ 0.3
SMARCE1-205ENST00000431889 GPR153Q6NV75 609 aa16.89■□□□□ 0.3
SMARCE1-205ENST00000431889 MAMDC4Q6UXC1 1216 aa16.89■□□□□ 0.3
SMARCE1-205ENST00000431889 ZNF589Q86UQ0 364 aaPredicted RBP16.89■□□□□ 0.3
SMARCE1-205ENST00000431889 NRBP1Q9UHY1 535 aa16.89■□□□□ 0.3
SMARCE1-205ENST00000431889 STXBP5LQ9Y2K9 1186 aa16.89■□□□□ 0.3
SMARCE1-205ENST00000431889 VCANP13611 3396 aa16.89■□□□□ 0.29
SMARCE1-205ENST00000431889 TRIM6-TRIM34B2RNG4 842 aa16.89■□□□□ 0.29
SMARCE1-205ENST00000431889 RAG1P15918 1043 aa16.89■□□□□ 0.29
SMARCE1-205ENST00000431889 FAAP100Q0VG06 881 aa16.89■□□□□ 0.29
SMARCE1-205ENST00000431889 NOL8Q76FK4 1167 aaKnown RBP16.89■□□□□ 0.29
SMARCE1-205ENST00000431889 STAG1Q8WVM7 1258 aa16.89■□□□□ 0.29
SMARCE1-205ENST00000431889 RILPL2Q969X0 211 aa16.89■□□□□ 0.29
SMARCE1-205ENST00000431889 EVI5LQ96CN4 794 aa16.89■□□□□ 0.29
SMARCE1-205ENST00000431889 TRERF1Q96PN7 1200 aa16.89■□□□□ 0.29
SMARCE1-205ENST00000431889 A1CFQ9NQ94 594 aaKnown RBP16.89■□□□□ 0.29
SMARCE1-205ENST00000431889 PRR12Q9ULL5 1215 aa16.89■□□□□ 0.29
SMARCE1-205ENST00000431889 ASTN1O14525 1302 aa16.88■□□□□ 0.29
SMARCE1-205ENST00000431889 LCTP09848 1927 aa16.88■□□□□ 0.29
SMARCE1-205ENST00000431889 ASGR1P07306 291 aa16.88■□□□□ 0.29
SMARCE1-205ENST00000431889 NMIQ13287 307 aaPredicted RBP16.88■□□□□ 0.29
SMARCE1-205ENST00000431889 CCSAPQ6IQ19 270 aaPredicted RBP16.88■□□□□ 0.29
SMARCE1-205ENST00000431889 KLHDC9Q8NEP7 349 aa16.88■□□□□ 0.29
SMARCE1-205ENST00000431889 CHST13Q8NET6 341 aa16.88■□□□□ 0.29
SMARCE1-205ENST00000431889 ACAD9Q9H845 621 aa16.88■□□□□ 0.29
SMARCE1-205ENST00000431889 GPCPD1Q9NPB8 672 aa16.88■□□□□ 0.29
SMARCE1-205ENST00000431889 GMCL1Q96IK5 515 aa16.87■□□□□ 0.29
SMARCE1-205ENST00000431889 KATNBL1Q9H079 304 aa16.87■□□□□ 0.29
SMARCE1-205ENST00000431889 PDGFCQ9NRA1 345 aa16.87■□□□□ 0.29
SMARCE1-205ENST00000431889 DUSP11O75319 330 aaKnown RBP16.86■□□□□ 0.29
SMARCE1-205ENST00000431889 FGAP02671 866 aa16.86■□□□□ 0.29
SMARCE1-205ENST00000431889 GNASQ5JWF2 1037 aa16.86■□□□□ 0.29
SMARCE1-205ENST00000431889 ZNF697Q5TEC3 545 aa16.86■□□□□ 0.29
SMARCE1-205ENST00000431889 C1orf53Q5VUE5 145 aa16.86■□□□□ 0.29
SMARCE1-205ENST00000431889 RCSD1Q6JBY9 416 aa16.86■□□□□ 0.29
SMARCE1-205ENST00000431889 NSMFQ6X4W1 530 aa16.86■□□□□ 0.29
SMARCE1-205ENST00000431889 CHURC1Q8WUH1 139 aa16.86■□□□□ 0.29
SMARCE1-205ENST00000431889 RNPC3Q96LT9 517 aaKnown RBP16.86■□□□□ 0.29
SMARCE1-205ENST00000431889 FBXO40Q9UH90 709 aa16.86■□□□□ 0.29
SMARCE1-205ENST00000431889 LRRC37A2A6NM11 1700 aa16.86■□□□□ 0.29
SMARCE1-205ENST00000431889 OAZ1P54368 228 aa16.85■□□□□ 0.29
SMARCE1-205ENST00000431889 ZNF467Q7Z7K2 595 aaPredicted RBP16.85■□□□□ 0.29
SMARCE1-205ENST00000431889 FAM160B2Q86V87 743 aa16.85■□□□□ 0.29
SMARCE1-205ENST00000431889 FBXO16Q8IX29 292 aaPredicted RBP16.85■□□□□ 0.29
SMARCE1-205ENST00000431889 MSL3Q8N5Y2 521 aaKnown RBP16.85■□□□□ 0.29
SMARCE1-205ENST00000431889 FAM133AQ8N9E0 248 aa16.85■□□□□ 0.29
SMARCE1-205ENST00000431889 NUP133Q8WUM0 1156 aa16.85■□□□□ 0.29
SMARCE1-205ENST00000431889 ZKSCAN3Q9BRR0 538 aa16.85■□□□□ 0.29
SMARCE1-205ENST00000431889 PPP1R12CQ9BZL4 782 aa16.85■□□□□ 0.29
SMARCE1-205ENST00000431889 ABHD16BQ9H3Z7 469 aa16.85■□□□□ 0.29
SMARCE1-205ENST00000431889 CCPG1Q9ULG6 757 aa16.85■□□□□ 0.29
SMARCE1-205ENST00000431889 RBAK-RBAKDNI3L0D1 243 aa16.85■□□□□ 0.29
SMARCE1-205ENST00000431889 KIAA0355O15063 1070 aa16.85■□□□□ 0.29
SMARCE1-205ENST00000431889 CTAGE5O15320 804 aa16.85■□□□□ 0.29
SMARCE1-205ENST00000431889 IGHDP01880 384 aa16.85■□□□□ 0.29
SMARCE1-205ENST00000431889 HSPD1P10809 573 aaKnown RBP16.85■□□□□ 0.29
SMARCE1-205ENST00000431889 MCMDC2Q4G0Z9 681 aa16.85■□□□□ 0.29
SMARCE1-205ENST00000431889 PPP1R13LQ8WUF5 828 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms