RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 TAL1P17542 331 aaPredicted RBP16.68■□□□□ 0.26
LAMA4-208ENST00000431543 CASTP20810 708 aaKnown RBP16.68■□□□□ 0.26
LAMA4-208ENST00000431543 MCM5P33992 734 aa16.68■□□□□ 0.26
LAMA4-208ENST00000431543 FGD1P98174 961 aa16.68■□□□□ 0.26
LAMA4-208ENST00000431543 CACNB2Q08289 660 aaPredicted RBP16.68■□□□□ 0.26
LAMA4-208ENST00000431543 ZNF543Q08ER8 600 aa16.68■□□□□ 0.26
LAMA4-208ENST00000431543 CCDC174Q6PII3 467 aa16.68■□□□□ 0.26
LAMA4-208ENST00000431543 BTNL9Q6UXG8 535 aa16.68■□□□□ 0.26
LAMA4-208ENST00000431543 PNMA1Q8ND90 353 aa16.68■□□□□ 0.26
LAMA4-208ENST00000431543 SHISA4Q96DD7 197 aa16.68■□□□□ 0.26
LAMA4-208ENST00000431543 IL17RAQ96F46 866 aa16.68■□□□□ 0.26
LAMA4-208ENST00000431543 MMP19Q99542 508 aa16.68■□□□□ 0.26
LAMA4-208ENST00000431543 UBAC1Q9BSL1 405 aa16.68■□□□□ 0.26
LAMA4-208ENST00000431543 CPVLQ9H3G5 476 aa16.68■□□□□ 0.26
LAMA4-208ENST00000431543 KAT14Q9H8E8 782 aa16.68■□□□□ 0.26
LAMA4-208ENST00000431543 SENP2Q9HC62 589 aa16.68■□□□□ 0.26
LAMA4-208ENST00000431543 MKI67P46013 3256 aaKnown RBP16.68■□□□□ 0.26
LAMA4-208ENST00000431543 ZNFX1Q9P2E3 1918 aaKnown RBP16.67■□□□□ 0.26
LAMA4-208ENST00000431543 IGHA2P01877 340 aa16.67■□□□□ 0.26
LAMA4-208ENST00000431543 PRKAR2AP13861 404 aaKnown RBP16.67■□□□□ 0.26
LAMA4-208ENST00000431543 ANTXR2P58335 489 aa16.67■□□□□ 0.26
LAMA4-208ENST00000431543 SART3Q15020 963 aaKnown RBP16.67■□□□□ 0.26
LAMA4-208ENST00000431543 CCDC178Q5BJE1 867 aa16.67■□□□□ 0.26
LAMA4-208ENST00000431543 MAP3K21Q5TCX8 1036 aa16.67■□□□□ 0.26
LAMA4-208ENST00000431543 RUFY3Q7L099 469 aa16.67■□□□□ 0.26
LAMA4-208ENST00000431543 DHX32Q7L7V1 743 aaKnown RBP16.67■□□□□ 0.26
LAMA4-208ENST00000431543 ABRAQ8N0Z2 381 aa16.67■□□□□ 0.26
LAMA4-208ENST00000431543 DEFB118Q96PH6 123 aa16.67■□□□□ 0.26
LAMA4-208ENST00000431543 UBA5Q9GZZ9 404 aa16.67■□□□□ 0.26
LAMA4-208ENST00000431543 ZSWIM6Q9HCJ5 1215 aa16.67■□□□□ 0.26
LAMA4-208ENST00000431543 PAK6Q9NQU5 681 aaPredicted RBP16.67■□□□□ 0.26
LAMA4-208ENST00000431543 HOMER2Q9NSB8 354 aa16.67■□□□□ 0.26
LAMA4-208ENST00000431543 RBBP6Q7Z6E9 1792 aaKnown RBP16.66■□□□□ 0.26
LAMA4-208ENST00000431543 ERICH2A1L162 156 aa16.66■□□□□ 0.26
LAMA4-208ENST00000431543 CCND3P30281 292 aaPredicted RBP16.66■□□□□ 0.26
LAMA4-208ENST00000431543 CYP2C19P33261 490 aa16.66■□□□□ 0.26
LAMA4-208ENST00000431543 GJA8P48165 433 aa16.66■□□□□ 0.26
LAMA4-208ENST00000431543 NEK4P51957 841 aa16.66■□□□□ 0.26
LAMA4-208ENST00000431543 OAZ1P54368 228 aa16.66■□□□□ 0.26
LAMA4-208ENST00000431543 KCTD2Q14681 263 aa16.66■□□□□ 0.26
LAMA4-208ENST00000431543 ANKRD1Q15327 319 aa16.66■□□□□ 0.26
LAMA4-208ENST00000431543 IFIT1BQ5T764 474 aaKnown RBP16.66■□□□□ 0.26
LAMA4-208ENST00000431543 SYDE2Q5VT97 1194 aa16.66■□□□□ 0.26
LAMA4-208ENST00000431543 MB21D2Q8IYB1 491 aaPredicted RBP16.66■□□□□ 0.26
LAMA4-208ENST00000431543 TRMT44Q8IYL2 757 aaKnown RBP16.66■□□□□ 0.26
LAMA4-208ENST00000431543 U2AF1L4Q8WU68 220 aaKnown RBP16.66■□□□□ 0.26
LAMA4-208ENST00000431543 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.66■□□□□ 0.26
LAMA4-208ENST00000431543 HMX1Q9NP08 348 aaPredicted RBP16.66■□□□□ 0.26
LAMA4-208ENST00000431543 GPHNQ9NQX3 736 aaPredicted RBP16.66■□□□□ 0.26
LAMA4-208ENST00000431543 PDRG1Q9NUG6 133 aa16.66■□□□□ 0.26
LAMA4-208ENST00000431543 RPTORQ8N122 1335 aa16.66■□□□□ 0.26
LAMA4-208ENST00000431543 IFIT3O14879 490 aaKnown RBP16.65■□□□□ 0.26
LAMA4-208ENST00000431543 SGPL1O95470 568 aa16.65■□□□□ 0.26
LAMA4-208ENST00000431543 FDX1P10109 184 aa16.65■□□□□ 0.26
LAMA4-208ENST00000431543 RPS6KB1P23443 525 aa16.65■□□□□ 0.26
LAMA4-208ENST00000431543 ANP32AP39687 249 aaKnown RBP16.65■□□□□ 0.26
LAMA4-208ENST00000431543 ADCK5Q3MIX3 580 aa16.65■□□□□ 0.26
LAMA4-208ENST00000431543 TSHZ2Q9NRE2 1034 aa16.65■□□□□ 0.26
LAMA4-208ENST00000431543 SMCHD1A6NHR9 2005 aa16.65■□□□□ 0.26
LAMA4-208ENST00000431543 ZNF236Q9UL36 1845 aa16.64■□□□□ 0.25
LAMA4-208ENST00000431543 TFRCP02786 760 aaKnown RBP16.64■□□□□ 0.25
LAMA4-208ENST00000431543 ALAS1P13196 640 aa16.64■□□□□ 0.25
LAMA4-208ENST00000431543 COPB2P35606 906 aa16.64■□□□□ 0.25
LAMA4-208ENST00000431543 MCM2P49736 904 aa16.64■□□□□ 0.25
LAMA4-208ENST00000431543 ZNF792Q3KQV3 632 aa16.64■□□□□ 0.25
LAMA4-208ENST00000431543 MUM1L1Q5H9M0 696 aa16.64■□□□□ 0.25
LAMA4-208ENST00000431543 PRAMEF19Q5SWL8 479 aa16.64■□□□□ 0.25
LAMA4-208ENST00000431543 MFSD14CQ5VZR4 134 aa16.64■□□□□ 0.25
LAMA4-208ENST00000431543 TRPV1Q8NER1 839 aa16.64■□□□□ 0.25
LAMA4-208ENST00000431543 IGDCC4Q8TDY8 1250 aa16.64■□□□□ 0.25
LAMA4-208ENST00000431543 MAML3Q96JK9 1138 aa16.64■□□□□ 0.25
LAMA4-208ENST00000431543 KIF2CQ99661 725 aa16.64■□□□□ 0.25
LAMA4-208ENST00000431543 MTA3Q9BTC8 594 aa16.64■□□□□ 0.25
LAMA4-208ENST00000431543 RANBP17Q9H2T7 1088 aaKnown RBP16.64■□□□□ 0.25
LAMA4-208ENST00000431543 WDR19Q8NEZ3 1342 aa16.64■□□□□ 0.25
LAMA4-208ENST00000431543 PRC1O43663 620 aa16.63■□□□□ 0.25
LAMA4-208ENST00000431543 OLFML2BQ68BL8 750 aa16.63■□□□□ 0.25
LAMA4-208ENST00000431543 TMTC2Q8N394 836 aa16.63■□□□□ 0.25
LAMA4-208ENST00000431543 STAG2Q8N3U4 1231 aa16.63■□□□□ 0.25
LAMA4-208ENST00000431543 CHST13Q8NET6 341 aa16.63■□□□□ 0.25
LAMA4-208ENST00000431543 DDX11Q96FC9 970 aa16.63■□□□□ 0.25
LAMA4-208ENST00000431543 TMEM87BQ96K49 555 aa16.63■□□□□ 0.25
LAMA4-208ENST00000431543 TRERF1Q96PN7 1200 aa16.63■□□□□ 0.25
LAMA4-208ENST00000431543 UPF3BQ9BZI7 483 aaKnown RBP16.63■□□□□ 0.25
LAMA4-208ENST00000431543 RNF146Q9NTX7 359 aa16.63■□□□□ 0.25
LAMA4-208ENST00000431543 DNAJC25-GNG10A0A024R161 153 aa16.62■□□□□ 0.25
LAMA4-208ENST00000431543 ICAM1P05362 532 aa16.62■□□□□ 0.25
LAMA4-208ENST00000431543 WTAPQ15007 396 aa16.62■□□□□ 0.25
LAMA4-208ENST00000431543 TMEM67Q5HYA8 995 aa16.62■□□□□ 0.25
LAMA4-208ENST00000431543 GPATCH4Q5T3I0 446 aaKnown RBP16.62■□□□□ 0.25
LAMA4-208ENST00000431543 ANKRD35Q8N283 1001 aa16.62■□□□□ 0.25
LAMA4-208ENST00000431543 CRISPLD2Q9H0B8 497 aa16.62■□□□□ 0.25
LAMA4-208ENST00000431543 ALDH8A1Q9H2A2 487 aaPredicted RBP16.62■□□□□ 0.25
LAMA4-208ENST00000431543 SLC5A4Q9NY91 659 aa16.62■□□□□ 0.25
LAMA4-208ENST00000431543 CCPG1Q9ULG6 757 aa16.62■□□□□ 0.25
LAMA4-208ENST00000431543 PARP1P09874 1014 aaKnown RBP16.61■□□□□ 0.25
LAMA4-208ENST00000431543 CNGA1P29973 690 aa16.61■□□□□ 0.25
LAMA4-208ENST00000431543 EXOSC10Q01780 885 aaKnown RBP16.61■□□□□ 0.25
LAMA4-208ENST00000431543 CNTN2Q02246 1040 aa16.61■□□□□ 0.25
LAMA4-208ENST00000431543 BECN1Q14457 450 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms