RNA–Protein interactions for RNA: ENST00000431135.2

CHCHD4P2-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 2, humanhuman

BASIC

Gene CHCHD4P2, Length 420 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P2-201ENST00000431135 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.92□□□□□ -0.66
CHCHD4P2-201ENST00000431135 PCDHB15Q9Y5E8 787 aa10.92□□□□□ -0.66
CHCHD4P2-201ENST00000431135 ASGR1P07306 291 aa10.91□□□□□ -0.66
CHCHD4P2-201ENST00000431135 SNAP25P60880 206 aa10.91□□□□□ -0.66
CHCHD4P2-201ENST00000431135 NKX3-2P78367 333 aa10.91□□□□□ -0.66
CHCHD4P2-201ENST00000431135 CCDC144BQ3MJ40 725 aa10.91□□□□□ -0.66
CHCHD4P2-201ENST00000431135 CCDC129Q6ZRS4 1044 aa10.91□□□□□ -0.66
CHCHD4P2-201ENST00000431135 ZNF467Q7Z7K2 595 aaPredicted RBP10.91□□□□□ -0.66
CHCHD4P2-201ENST00000431135 RNF180Q86T96 592 aa10.91□□□□□ -0.66
CHCHD4P2-201ENST00000431135 FAM126BQ8IXS8 530 aa10.91□□□□□ -0.66
CHCHD4P2-201ENST00000431135 IFNL3Q8IZI9 196 aa10.91□□□□□ -0.66
CHCHD4P2-201ENST00000431135 MSL3Q8N5Y2 521 aaKnown RBP10.91□□□□□ -0.66
CHCHD4P2-201ENST00000431135 FAM133AQ8N9E0 248 aa10.91□□□□□ -0.66
CHCHD4P2-201ENST00000431135 GMCL1P1Q8NEA9 526 aa10.91□□□□□ -0.66
CHCHD4P2-201ENST00000431135 KIFC2Q96AC6 838 aa10.91□□□□□ -0.66
CHCHD4P2-201ENST00000431135 RNPC3Q96LT9 517 aaKnown RBP10.91□□□□□ -0.66
CHCHD4P2-201ENST00000431135 AGBL1Q96MI9 1066 aa10.91□□□□□ -0.66
CHCHD4P2-201ENST00000431135 TOX2Q96NM4 488 aa10.91□□□□□ -0.66
CHCHD4P2-201ENST00000431135 TSEN34Q9BSV6 310 aaKnown RBP10.91□□□□□ -0.66
CHCHD4P2-201ENST00000431135 A1CFQ9NQ94 594 aaKnown RBP10.91□□□□□ -0.66
CHCHD4P2-201ENST00000431135 IL17RBQ9NRM6 502 aa10.91□□□□□ -0.66
CHCHD4P2-201ENST00000431135 SLC5A4Q9NY91 659 aa10.91□□□□□ -0.66
CHCHD4P2-201ENST00000431135 BDP1A6H8Y1 2624 aa10.91□□□□□ -0.66
CHCHD4P2-201ENST00000431135 LAMA4Q16363 1823 aa10.91□□□□□ -0.66
CHCHD4P2-201ENST00000431135 DUSP11O75319 330 aaKnown RBP10.9□□□□□ -0.66
CHCHD4P2-201ENST00000431135 CD4P01730 458 aa10.9□□□□□ -0.66
CHCHD4P2-201ENST00000431135 DNAJB2P25686 324 aa10.9□□□□□ -0.66
CHCHD4P2-201ENST00000431135 NOVP48745 357 aa10.9□□□□□ -0.66
CHCHD4P2-201ENST00000431135 GJA9P57773 515 aa10.9□□□□□ -0.66
CHCHD4P2-201ENST00000431135 BEX3Q00994 111 aa10.9□□□□□ -0.66
CHCHD4P2-201ENST00000431135 FPGSQ05932 587 aa10.9□□□□□ -0.66
CHCHD4P2-201ENST00000431135 ACVR2BQ13705 512 aa10.9□□□□□ -0.66
CHCHD4P2-201ENST00000431135 MUM1L1Q5H9M0 696 aa10.9□□□□□ -0.66
CHCHD4P2-201ENST00000431135 TMEM240Q5SV17 173 aa10.9□□□□□ -0.66
CHCHD4P2-201ENST00000431135 VPS53Q5VIR6 699 aa10.9□□□□□ -0.66
CHCHD4P2-201ENST00000431135 CCDC144CPQ8IYA2 1237 aa10.9□□□□□ -0.66
CHCHD4P2-201ENST00000431135 PRPF38AQ8NAV1 312 aaKnown RBP10.9□□□□□ -0.66
CHCHD4P2-201ENST00000431135 NEDD1Q8NHV4 660 aa10.9□□□□□ -0.66
CHCHD4P2-201ENST00000431135 STARD7Q9NQZ5 370 aa10.9□□□□□ -0.66
CHCHD4P2-201ENST00000431135 HOMER2Q9NSB8 354 aa10.9□□□□□ -0.66
CHCHD4P2-201ENST00000431135 CXXC1Q9P0U4 656 aaPredicted RBP10.9□□□□□ -0.66
CHCHD4P2-201ENST00000431135 GNEQ9Y223 722 aaKnown RBP10.9□□□□□ -0.66
CHCHD4P2-201ENST00000431135 SCN10AQ9Y5Y9 1956 aa10.9□□□□□ -0.66
CHCHD4P2-201ENST00000431135 MOXD2PA6NHM9 499 aa10.89□□□□□ -0.67
CHCHD4P2-201ENST00000431135 TIMP1P01033 207 aa10.89□□□□□ -0.67
CHCHD4P2-201ENST00000431135 MS4A1P11836 297 aa10.89□□□□□ -0.67
CHCHD4P2-201ENST00000431135 FOSL2P15408 326 aa10.89□□□□□ -0.67
CHCHD4P2-201ENST00000431135 CSF2RAP15509 400 aa10.89□□□□□ -0.67
CHCHD4P2-201ENST00000431135 RAG1P15918 1043 aa10.89□□□□□ -0.67
CHCHD4P2-201ENST00000431135 COPB2P35606 906 aa10.89□□□□□ -0.67
CHCHD4P2-201ENST00000431135 SLC4A3P48751 1232 aa10.89□□□□□ -0.67
CHCHD4P2-201ENST00000431135 ZMYM1Q5SVZ6 1142 aa10.89□□□□□ -0.67
CHCHD4P2-201ENST00000431135 SLFN13Q68D06 897 aa10.89□□□□□ -0.67
CHCHD4P2-201ENST00000431135 ZSCAN25Q6NSZ9 544 aa10.89□□□□□ -0.67
CHCHD4P2-201ENST00000431135 SLC43A3Q8NBI5 491 aa10.89□□□□□ -0.67
CHCHD4P2-201ENST00000431135 PBX4Q9BYU1 374 aa10.89□□□□□ -0.67
CHCHD4P2-201ENST00000431135 PDGFCQ9NRA1 345 aa10.89□□□□□ -0.67
CHCHD4P2-201ENST00000431135 TMEM39AQ9NV64 488 aa10.89□□□□□ -0.67
CHCHD4P2-201ENST00000431135 FAM184BQ9ULE4 1060 aa10.89□□□□□ -0.67
CHCHD4P2-201ENST00000431135 CNPY2Q9Y2B0 182 aa10.89□□□□□ -0.67
CHCHD4P2-201ENST00000431135 COL4A4P53420 1690 aaPredicted RBP10.89□□□□□ -0.67
CHCHD4P2-201ENST00000431135 PATL2C9JE40 543 aaKnown RBP10.88□□□□□ -0.67
CHCHD4P2-201ENST00000431135 TTLL1O95922 423 aa10.88□□□□□ -0.67
CHCHD4P2-201ENST00000431135 C6orf222P0C671 652 aaPredicted RBP10.88□□□□□ -0.67
CHCHD4P2-201ENST00000431135 ACRP10323 421 aa10.88□□□□□ -0.67
CHCHD4P2-201ENST00000431135 SMPD1P17405 629 aa10.88□□□□□ -0.67
CHCHD4P2-201ENST00000431135 TDO2P48775 406 aa10.88□□□□□ -0.67
CHCHD4P2-201ENST00000431135 OAZ1P54368 228 aa10.88□□□□□ -0.67
CHCHD4P2-201ENST00000431135 CTDSPL2Q05D32 466 aa10.88□□□□□ -0.67
CHCHD4P2-201ENST00000431135 PPARAQ07869 468 aa10.88□□□□□ -0.67
CHCHD4P2-201ENST00000431135 ADGRE1Q14246 886 aa10.88□□□□□ -0.67
CHCHD4P2-201ENST00000431135 MFSD5Q6N075 450 aa10.88□□□□□ -0.67
CHCHD4P2-201ENST00000431135 TAPT1Q6NXT6 567 aa10.88□□□□□ -0.67
CHCHD4P2-201ENST00000431135 AMOTL1Q8IY63 956 aa10.88□□□□□ -0.67
CHCHD4P2-201ENST00000431135 GMCL1Q96IK5 515 aa10.88□□□□□ -0.67
CHCHD4P2-201ENST00000431135 WNT8AQ9H1J5 351 aa10.88□□□□□ -0.67
CHCHD4P2-201ENST00000431135 MKNK2Q9HBH9 465 aa10.88□□□□□ -0.67
CHCHD4P2-201ENST00000431135 FEM1BQ9UK73 627 aa10.88□□□□□ -0.67
CHCHD4P2-201ENST00000431135 ELP1O95163 1332 aa10.87□□□□□ -0.67
CHCHD4P2-201ENST00000431135 TMEM265A0A087WTH1 108 aa10.87□□□□□ -0.67
CHCHD4P2-201ENST00000431135 TMEM232C9JQI7 657 aa10.87□□□□□ -0.67
CHCHD4P2-201ENST00000431135 ARVCFO00192 962 aa10.87□□□□□ -0.67
CHCHD4P2-201ENST00000431135 BMP3P12645 472 aa10.87□□□□□ -0.67
CHCHD4P2-201ENST00000431135 CYP2C18P33260 490 aa10.87□□□□□ -0.67
CHCHD4P2-201ENST00000431135 TFAP4Q01664 338 aa10.87□□□□□ -0.67
CHCHD4P2-201ENST00000431135 CXCL17Q6UXB2 119 aa10.87□□□□□ -0.67
CHCHD4P2-201ENST00000431135 KCTD1Q719H9 257 aa10.87□□□□□ -0.67
CHCHD4P2-201ENST00000431135 FBXO16Q8IX29 292 aaPredicted RBP10.87□□□□□ -0.67
CHCHD4P2-201ENST00000431135 CHST13Q8NET6 341 aa10.87□□□□□ -0.67
CHCHD4P2-201ENST00000431135 DDX11Q96FC9 970 aa10.87□□□□□ -0.67
CHCHD4P2-201ENST00000431135 DDRGK1Q96HY6 314 aa10.87□□□□□ -0.67
CHCHD4P2-201ENST00000431135 PPP1R12CQ9BZL4 782 aa10.87□□□□□ -0.67
CHCHD4P2-201ENST00000431135 ABHD16BQ9H3Z7 469 aa10.87□□□□□ -0.67
CHCHD4P2-201ENST00000431135 RNF146Q9NTX7 359 aa10.87□□□□□ -0.67
CHCHD4P2-201ENST00000431135 SYNPO2Q9UMS6 1093 aa10.87□□□□□ -0.67
CHCHD4P2-201ENST00000431135 YBX2Q9Y2T7 364 aaKnown RBP10.87□□□□□ -0.67
CHCHD4P2-201ENST00000431135 MYO9BQ13459 2157 aa10.87□□□□□ -0.67
CHCHD4P2-201ENST00000431135 TET1Q8NFU7 2136 aa10.87□□□□□ -0.67
CHCHD4P2-201ENST00000431135 TTC41PQ6P2S7 1318 aa10.86□□□□□ -0.67
CHCHD4P2-201ENST00000431135 MCCP23508 829 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms