RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 IKQ13123 557 aaPredicted RBP17.86■□□□□ 0.45
PTCD1-204ENST00000430982 CCDC96Q2M329 555 aa17.86■□□□□ 0.45
PTCD1-204ENST00000430982 CCDC178Q5BJE1 867 aa17.86■□□□□ 0.45
PTCD1-204ENST00000430982 MFSD14CQ5VZR4 134 aa17.86■□□□□ 0.45
PTCD1-204ENST00000430982 SYMPKQ92797 1274 aaKnown RBP17.86■□□□□ 0.45
PTCD1-204ENST00000430982 KIFC2Q96AC6 838 aa17.86■□□□□ 0.45
PTCD1-204ENST00000430982 GMCL1Q96IK5 515 aa17.86■□□□□ 0.45
PTCD1-204ENST00000430982 ZSWIM5Q9P217 1185 aa17.86■□□□□ 0.45
PTCD1-204ENST00000430982 CTDP1Q9Y5B0 961 aaPredicted RBP17.86■□□□□ 0.45
PTCD1-204ENST00000430982 LAMA4Q16363 1823 aa17.86■□□□□ 0.45
PTCD1-204ENST00000430982 TMEM265A0A087WTH1 108 aa17.85■□□□□ 0.45
PTCD1-204ENST00000430982 SLC15A5A6NIM6 579 aa17.85■□□□□ 0.45
PTCD1-204ENST00000430982 CYBAP13498 195 aa17.85■□□□□ 0.45
PTCD1-204ENST00000430982 ATN1P54259 1190 aaPredicted RBP17.85■□□□□ 0.45
PTCD1-204ENST00000430982 GRB14Q14449 540 aa17.85■□□□□ 0.45
PTCD1-204ENST00000430982 TMEM132BQ14DG7 1078 aa17.85■□□□□ 0.45
PTCD1-204ENST00000430982 RCSD1Q6JBY9 416 aa17.85■□□□□ 0.45
PTCD1-204ENST00000430982 KCTD1Q719H9 257 aa17.85■□□□□ 0.45
PTCD1-204ENST00000430982 RASGRP2Q7LDG7 609 aa17.85■□□□□ 0.45
PTCD1-204ENST00000430982 RALYLQ86SE5 291 aaKnown RBP17.85■□□□□ 0.45
PTCD1-204ENST00000430982 PRPF38AQ8NAV1 312 aaKnown RBP17.85■□□□□ 0.45
PTCD1-204ENST00000430982 TRPV1Q8NER1 839 aa17.85■□□□□ 0.45
PTCD1-204ENST00000430982 DCAF4Q8WV16 495 aa17.85■□□□□ 0.45
PTCD1-204ENST00000430982 MYLIPQ8WY64 445 aa17.85■□□□□ 0.45
PTCD1-204ENST00000430982 TTC14Q96N46 770 aa17.85■□□□□ 0.45
PTCD1-204ENST00000430982 ZSCAN10Q96SZ4 725 aaPredicted RBP17.85■□□□□ 0.45
PTCD1-204ENST00000430982 UBAC1Q9BSL1 405 aa17.85■□□□□ 0.45
PTCD1-204ENST00000430982 PRKAG2Q9UGJ0 569 aa17.85■□□□□ 0.45
PTCD1-204ENST00000430982 ADAMTS5Q9UNA0 930 aa17.85■□□□□ 0.45
PTCD1-204ENST00000430982 TAF6LQ9Y6J9 622 aa17.85■□□□□ 0.45
PTCD1-204ENST00000430982 MYH4Q9Y623 1939 aa17.84■□□□□ 0.45
PTCD1-204ENST00000430982 E7EWF7 191 aa17.84■□□□□ 0.45
PTCD1-204ENST00000430982 ZBED4O75132 1171 aa17.84■□□□□ 0.45
PTCD1-204ENST00000430982 ERCC3P19447 782 aa17.84■□□□□ 0.45
PTCD1-204ENST00000430982 PTPREP23469 700 aa17.84■□□□□ 0.45
PTCD1-204ENST00000430982 FAM160B2Q86V87 743 aa17.84■□□□□ 0.45
PTCD1-204ENST00000430982 NCAPG2Q86XI2 1143 aa17.84■□□□□ 0.45
PTCD1-204ENST00000430982 DGKHQ86XP1 1220 aa17.84■□□□□ 0.45
PTCD1-204ENST00000430982 IVNS1ABPQ9Y6Y0 642 aa17.84■□□□□ 0.45
PTCD1-204ENST00000430982 TNKSO95271 1327 aa17.83■□□□□ 0.44
PTCD1-204ENST00000430982 STAT3P40763 770 aa17.83■□□□□ 0.44
PTCD1-204ENST00000430982 STAT2P52630 851 aa17.83■□□□□ 0.44
PTCD1-204ENST00000430982 C1orf53Q5VUE5 145 aa17.83■□□□□ 0.44
PTCD1-204ENST00000430982 SLC39A5Q6ZMH5 540 aa17.83■□□□□ 0.44
PTCD1-204ENST00000430982 STOX1Q6ZVD7 989 aa17.83■□□□□ 0.44
PTCD1-204ENST00000430982 CYB5R4Q7L1T6 521 aa17.83■□□□□ 0.44
PTCD1-204ENST00000430982 SHCBP1Q8NEM2 672 aa17.83■□□□□ 0.44
PTCD1-204ENST00000430982 REPS2Q8NFH8 660 aa17.83■□□□□ 0.44
PTCD1-204ENST00000430982 CHURC1Q8WUH1 139 aa17.83■□□□□ 0.44
PTCD1-204ENST00000430982 KAT14Q9H8E8 782 aa17.83■□□□□ 0.44
PTCD1-204ENST00000430982 FRMPD2Q68DX3 1309 aaPredicted RBP17.82■□□□□ 0.44
PTCD1-204ENST00000430982 SLC27A2O14975 620 aa17.82■□□□□ 0.44
PTCD1-204ENST00000430982 SLC25A27O95847 323 aa17.82■□□□□ 0.44
PTCD1-204ENST00000430982 FOSL2P15408 326 aa17.82■□□□□ 0.44
PTCD1-204ENST00000430982 SLC4A3P48751 1232 aa17.82■□□□□ 0.44
PTCD1-204ENST00000430982 CREB3L3Q68CJ9 461 aa17.82■□□□□ 0.44
PTCD1-204ENST00000430982 CPXCR1Q8N123 301 aa17.82■□□□□ 0.44
PTCD1-204ENST00000430982 ENAHQ8N8S7 591 aaPredicted RBP17.82■□□□□ 0.44
PTCD1-204ENST00000430982 NCOA7Q8NI08 942 aa17.82■□□□□ 0.44
PTCD1-204ENST00000430982 NPLOC4Q8TAT6 608 aa17.82■□□□□ 0.44
PTCD1-204ENST00000430982 MROH8Q9H579 483 aa17.82■□□□□ 0.44
PTCD1-204ENST00000430982 GPCPD1Q9NPB8 672 aa17.82■□□□□ 0.44
PTCD1-204ENST00000430982 PDLIM7Q9NR12 457 aa17.82■□□□□ 0.44
PTCD1-204ENST00000430982 CYP2C19P33261 490 aa17.81■□□□□ 0.44
PTCD1-204ENST00000430982 SNRNP48Q6IEG0 339 aaKnown RBP17.81■□□□□ 0.44
PTCD1-204ENST00000430982 TTBK2Q6IQ55 1244 aa17.81■□□□□ 0.44
PTCD1-204ENST00000430982 RIOX2Q8IUF8 465 aa17.81■□□□□ 0.44
PTCD1-204ENST00000430982 ANKS1AQ92625 1134 aa17.81■□□□□ 0.44
PTCD1-204ENST00000430982 BADQ92934 168 aa17.81■□□□□ 0.44
PTCD1-204ENST00000430982 TEX13BQ9BXU2 312 aa17.81■□□□□ 0.44
PTCD1-204ENST00000430982 SLC38A10Q9HBR0 1119 aa17.81■□□□□ 0.44
PTCD1-204ENST00000430982 RAVER2Q9HCJ3 691 aaKnown RBP17.81■□□□□ 0.44
PTCD1-204ENST00000430982 ZNF214Q9UL59 606 aaPredicted RBP17.81■□□□□ 0.44
PTCD1-204ENST00000430982 ATP11BQ9Y2G3 1177 aa17.81■□□□□ 0.44
PTCD1-204ENST00000430982 A0A0G2JMZ2 1700 aa17.81■□□□□ 0.44
PTCD1-204ENST00000430982 TRIM43BA6NCK2 446 aa17.8■□□□□ 0.44
PTCD1-204ENST00000430982 PLA2G6O60733 806 aa17.8■□□□□ 0.44
PTCD1-204ENST00000430982 PDHBP11177 359 aa17.8■□□□□ 0.44
PTCD1-204ENST00000430982 COPB2P35606 906 aa17.8■□□□□ 0.44
PTCD1-204ENST00000430982 IFIT1BQ5T764 474 aaKnown RBP17.8■□□□□ 0.44
PTCD1-204ENST00000430982 PNMA1Q8ND90 353 aa17.8■□□□□ 0.44
PTCD1-204ENST00000430982 TRIM43Q96BQ3 446 aaPredicted RBP17.8■□□□□ 0.44
PTCD1-204ENST00000430982 IFIT3O14879 490 aaKnown RBP17.79■□□□□ 0.44
PTCD1-204ENST00000430982 FDX1P10109 184 aa17.79■□□□□ 0.44
PTCD1-204ENST00000430982 COL9A1P20849 921 aa17.79■□□□□ 0.44
PTCD1-204ENST00000430982 SLC16A2P36021 539 aa17.79■□□□□ 0.44
PTCD1-204ENST00000430982 SNAP25P60880 206 aa17.79■□□□□ 0.44
PTCD1-204ENST00000430982 ZNF543Q08ER8 600 aa17.79■□□□□ 0.44
PTCD1-204ENST00000430982 NECTIN1Q15223 517 aa17.79■□□□□ 0.44
PTCD1-204ENST00000430982 TRIM60Q495X7 471 aa17.79■□□□□ 0.44
PTCD1-204ENST00000430982 TJAP1Q5JTD0 557 aa17.79■□□□□ 0.44
PTCD1-204ENST00000430982 GJC2Q5T442 439 aaPredicted RBP17.79■□□□□ 0.44
PTCD1-204ENST00000430982 RNF20Q5VTR2 975 aa17.79■□□□□ 0.44
PTCD1-204ENST00000430982 OLFML2BQ68BL8 750 aa17.79■□□□□ 0.44
PTCD1-204ENST00000430982 CHST3Q7LGC8 479 aa17.79■□□□□ 0.44
PTCD1-204ENST00000430982 ARRDC4Q8NCT1 418 aa17.79■□□□□ 0.44
PTCD1-204ENST00000430982 MMP19Q99542 508 aa17.79■□□□□ 0.44
PTCD1-204ENST00000430982 PRR12Q9ULL5 1215 aa17.79■□□□□ 0.44
PTCD1-204ENST00000430982 ERICH2A1L162 156 aa17.78■□□□□ 0.44
PTCD1-204ENST00000430982 STRNO43815 780 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms