RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 ZHX1Q9UKY1 873 aaPredicted RBP14.48□□□□□ -0.09
PTCH1-207ENST00000429896 FAM160B1Q5W0V3 765 aa14.48□□□□□ -0.09
PTCH1-207ENST00000429896 CYB5R4Q7L1T6 521 aa14.48□□□□□ -0.09
PTCH1-207ENST00000429896 ANKRD13AQ8IZ07 590 aa14.48□□□□□ -0.09
PTCH1-207ENST00000429896 SYT17Q9BSW7 474 aa14.48□□□□□ -0.09
PTCH1-207ENST00000429896 MTA3Q9BTC8 594 aa14.48□□□□□ -0.09
PTCH1-207ENST00000429896 WDR19Q8NEZ3 1342 aa14.48□□□□□ -0.09
PTCH1-207ENST00000429896 PHACTR2O75167 634 aa14.48□□□□□ -0.09
PTCH1-207ENST00000429896 RPAP3Q9H6T3 665 aaPredicted RBP14.48□□□□□ -0.09
PTCH1-207ENST00000429896 RAVER2Q9HCJ3 691 aaKnown RBP14.48□□□□□ -0.09
PTCH1-207ENST00000429896 TPH2Q8IWU9 490 aa14.47□□□□□ -0.09
PTCH1-207ENST00000429896 CTNND1O60716 968 aaKnown RBP14.47□□□□□ -0.09
PTCH1-207ENST00000429896 SNRNP48Q6IEG0 339 aaKnown RBP14.47□□□□□ -0.09
PTCH1-207ENST00000429896 CABP7Q86V35 215 aa14.47□□□□□ -0.09
PTCH1-207ENST00000429896 ZNF280CQ8ND82 737 aa14.47□□□□□ -0.09
PTCH1-207ENST00000429896 F5H6K3 240 aa14.47□□□□□ -0.09
PTCH1-207ENST00000429896 PPP4CP60510 307 aa14.47□□□□□ -0.09
PTCH1-207ENST00000429896 KLRC3Q07444 240 aa14.47□□□□□ -0.09
PTCH1-207ENST00000429896 UTP14CQ5TAP6 766 aaKnown RBP14.47□□□□□ -0.09
PTCH1-207ENST00000429896 RNF207Q6ZRF8 634 aa14.47□□□□□ -0.09
PTCH1-207ENST00000429896 TERF1P54274 439 aa14.47□□□□□ -0.09
PTCH1-207ENST00000429896 STRN3Q13033 797 aa14.47□□□□□ -0.09
PTCH1-207ENST00000429896 TAF4BQ92750 862 aa14.47□□□□□ -0.09
PTCH1-207ENST00000429896 DRC1Q96MC2 740 aa14.47□□□□□ -0.09
PTCH1-207ENST00000429896 GINS2Q9Y248 185 aa14.47□□□□□ -0.09
PTCH1-207ENST00000429896 STRCQ7RTU9 1775 aa14.47□□□□□ -0.09
PTCH1-207ENST00000429896 GOLGA6L10A0A0M3HER8 536 aa14.46□□□□□ -0.09
PTCH1-207ENST00000429896 COPB2P35606 906 aa14.46□□□□□ -0.09
PTCH1-207ENST00000429896 ENAHQ8N8S7 591 aaPredicted RBP14.46□□□□□ -0.09
PTCH1-207ENST00000429896 NUP88Q99567 741 aaPredicted RBP14.46□□□□□ -0.09
PTCH1-207ENST00000429896 MRVI1Q9Y6F6 885 aa14.46□□□□□ -0.09
PTCH1-207ENST00000429896 PDS5AQ29RF7 1337 aaKnown RBP14.46□□□□□ -0.09
PTCH1-207ENST00000429896 SALL1Q9NSC2 1324 aa14.46□□□□□ -0.09
PTCH1-207ENST00000429896 KDM3AQ9Y4C1 1321 aa14.46□□□□□ -0.09
PTCH1-207ENST00000429896 NT5C3AQ9H0P0 336 aa14.46□□□□□ -0.09
PTCH1-207ENST00000429896 RTEL1Q9NZ71 1219 aa14.46□□□□□ -0.09
PTCH1-207ENST00000429896 FKBP1AP62942 108 aaKnown RBP14.46□□□□□ -0.09
PTCH1-207ENST00000429896 C16orf86Q6ZW13 317 aa14.46□□□□□ -0.09
PTCH1-207ENST00000429896 FAM212AQ96EL1 285 aa14.46□□□□□ -0.09
PTCH1-207ENST00000429896 ZBTB5O15062 677 aa14.46□□□□□ -0.09
PTCH1-207ENST00000429896 FDX1P10109 184 aa14.46□□□□□ -0.09
PTCH1-207ENST00000429896 IFNAR1P17181 557 aa14.46□□□□□ -0.09
PTCH1-207ENST00000429896 MB21D2Q8IYB1 491 aaPredicted RBP14.46□□□□□ -0.09
PTCH1-207ENST00000429896 CETPP11597 493 aa14.46□□□□□ -0.1
PTCH1-207ENST00000429896 SREBF2Q12772 1141 aa14.46□□□□□ -0.1
PTCH1-207ENST00000429896 CDAN1Q8IWY9 1227 aa14.46□□□□□ -0.1
PTCH1-207ENST00000429896 CDHR1Q96JP9 859 aa14.46□□□□□ -0.1
PTCH1-207ENST00000429896 GRM4Q14833 912 aa14.45□□□□□ -0.1
PTCH1-207ENST00000429896 KLHL40Q2TBA0 621 aa14.45□□□□□ -0.1
PTCH1-207ENST00000429896 PRPF38AQ8NAV1 312 aaKnown RBP14.45□□□□□ -0.1
PTCH1-207ENST00000429896 TRERF1Q96PN7 1200 aa14.45□□□□□ -0.1
PTCH1-207ENST00000429896 PARK7Q99497 189 aaKnown RBP14.45□□□□□ -0.1
PTCH1-207ENST00000429896 KCNH3Q9ULD8 1083 aa14.45□□□□□ -0.1
PTCH1-207ENST00000429896 EXOC7Q9UPT5 735 aa14.45□□□□□ -0.1
PTCH1-207ENST00000429896 OR52Z1P0C646 297 aa14.45□□□□□ -0.1
PTCH1-207ENST00000429896 TAF1CQ15572 869 aaPredicted RBP14.45□□□□□ -0.1
PTCH1-207ENST00000429896 PRDM10Q9NQV6 1147 aa14.45□□□□□ -0.1
PTCH1-207ENST00000429896 BICDL2A1A5D9 508 aa14.45□□□□□ -0.1
PTCH1-207ENST00000429896 MYSM1Q5VVJ2 828 aa14.45□□□□□ -0.1
PTCH1-207ENST00000429896 TMTC3Q6ZXV5 915 aa14.45□□□□□ -0.1
PTCH1-207ENST00000429896 ABCB11O95342 1321 aa14.45□□□□□ -0.1
PTCH1-207ENST00000429896 COL16A1Q07092 1604 aaPredicted RBP14.45□□□□□ -0.1
PTCH1-207ENST00000429896 USP8P40818 1118 aa14.45□□□□□ -0.1
PTCH1-207ENST00000429896 CRY2Q49AN0 593 aa14.45□□□□□ -0.1
PTCH1-207ENST00000429896 USP50Q70EL3 339 aaPredicted RBP14.45□□□□□ -0.1
PTCH1-207ENST00000429896 ZFYVE28Q9HCC9 887 aa14.45□□□□□ -0.1
PTCH1-207ENST00000429896 PCDHA12Q9UN75 941 aa14.45□□□□□ -0.1
PTCH1-207ENST00000429896 FAM205AQ6ZU69 1335 aa14.45□□□□□ -0.1
PTCH1-207ENST00000429896 A0A1B0GVL5 298 aa14.45□□□□□ -0.1
PTCH1-207ENST00000429896 BTBD18B2RXH4 712 aa14.45□□□□□ -0.1
PTCH1-207ENST00000429896 NRBP2Q9NSY0 501 aa14.45□□□□□ -0.1
PTCH1-207ENST00000429896 PLEKHA8P1O95397 391 aa14.44□□□□□ -0.1
PTCH1-207ENST00000429896 NBPF9Q3BBW0 867 aa14.44□□□□□ -0.1
PTCH1-207ENST00000429896 MAEAQ7L5Y9 396 aa14.44□□□□□ -0.1
PTCH1-207ENST00000429896 VPS36Q86VN1 386 aa14.44□□□□□ -0.1
PTCH1-207ENST00000429896 DPF2Q92785 391 aa14.44□□□□□ -0.1
PTCH1-207ENST00000429896 ZNF577Q9BSK1 485 aa14.44□□□□□ -0.1
PTCH1-207ENST00000429896 GINM1Q9NU53 330 aa14.44□□□□□ -0.1
PTCH1-207ENST00000429896 CAVIN2O95810 425 aa14.44□□□□□ -0.1
PTCH1-207ENST00000429896 DYDC1Q8WWB3 177 aa14.44□□□□□ -0.1
PTCH1-207ENST00000429896 LPAR1Q92633 364 aa14.44□□□□□ -0.1
PTCH1-207ENST00000429896 SCYL3Q8IZE3 742 aa14.44□□□□□ -0.1
PTCH1-207ENST00000429896 NSUN7Q8NE18 718 aaKnown RBP14.44□□□□□ -0.1
PTCH1-207ENST00000429896 ZSCAN30Q86W11 494 aa14.44□□□□□ -0.1
PTCH1-207ENST00000429896 MMP19Q99542 508 aa14.44□□□□□ -0.1
PTCH1-207ENST00000429896 PUF60Q9UHX1 559 aaKnown RBP14.44□□□□□ -0.1
PTCH1-207ENST00000429896 TECP42680 631 aa14.44□□□□□ -0.1
PTCH1-207ENST00000429896 FAM160A1Q05DH4 1040 aa14.44□□□□□ -0.1
PTCH1-207ENST00000429896 SPECC1Q5M775 1068 aa14.44□□□□□ -0.1
PTCH1-207ENST00000429896 MTERF4Q7Z6M4 381 aaKnown RBP14.44□□□□□ -0.1
PTCH1-207ENST00000429896 ZFP91Q96JP5 570 aaPredicted RBP14.44□□□□□ -0.1
PTCH1-207ENST00000429896 SH3GLB2Q9NR46 395 aa14.44□□□□□ -0.1
PTCH1-207ENST00000429896 NYAP2Q9P242 653 aa14.44□□□□□ -0.1
PTCH1-207ENST00000429896 KCNG1Q9UIX4 513 aa14.44□□□□□ -0.1
PTCH1-207ENST00000429896 WDR46O15213 610 aaKnown RBP14.44□□□□□ -0.1
PTCH1-207ENST00000429896 FAM173BQ6P4H8 233 aa14.44□□□□□ -0.1
PTCH1-207ENST00000429896 METTL13Q8N6R0 699 aa14.44□□□□□ -0.1
PTCH1-207ENST00000429896 EZRP15311 586 aaKnown RBP14.43□□□□□ -0.1
PTCH1-207ENST00000429896 DACT2Q5SW24 774 aa14.43□□□□□ -0.1
PTCH1-207ENST00000429896 C15orf52Q6ZUT6 534 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms