RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 COG7P83436 770 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 MTHFSDQ2M296 383 aaKnown RBP8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 POTEBQ6S5H4 581 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 KDM4CQ9H3R0 1056 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 OSBPL3Q9H4L5 887 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 SBNO1A3KN83 1393 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 MAP3K7O43318 606 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 RANBP6O60518 1105 aaKnown RBP8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 GPTP24298 496 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 IL13P35225 146 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 CFAP36Q96G28 342 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 CARD6Q9BX69 1037 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 TMED10P49755 219 aaKnown RBP8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 TAF11Q15544 211 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 DAB2IPQ5VWQ8 1189 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 PRR23CQ6ZRP0 262 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 AGGF1Q8N302 714 aaeCLIP8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 SLC5A1P13866 664 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 IDEP14735 1019 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 LRIG3Q6UXM1 1119 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 PHACTR2O75167 634 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 TBCAO75347 108 aaKnown RBP8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 ABCC12Q96J65 1359 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 TCP11L1Q9NUJ3 509 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 LRCH1Q9Y2L9 728 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 ATP5J2-PTCD1G3V325 749 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 PTCD1O75127 700 aaKnown RBP8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 VSIG1Q86XK7 387 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 MAP3K15Q6ZN16 1313 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 RHOXF2BP0C7M4 288 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 SPIDRQ14159 915 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 ZNF569Q5MCW4 686 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 RHOXF2Q9BQY4 288 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 SENP1Q9P0U3 644 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 LRRC7Q96NW7 1537 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 GSTTP1A0A1W2PQM5 241 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 CCDC166P0CW27 439 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 NLRP12P59046 1061 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 KARSQ15046 597 aaKnown RBP8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 MYSM1Q5VVJ2 828 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 CNNM2Q9H8M5 875 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 USP19O94966 1318 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 ZNF202O95125 648 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 GCLCP48506 637 aaPredicted RBP8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 SERPINB10P48595 397 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 MAIP1Q8WWC4 291 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 NDE1Q9NXR1 346 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 BZW2Q9Y6E2 419 aaKnown RBP8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 ATP7BP35670 1465 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 WTAPQ15007 396 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 ME3Q16798 604 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 CLTCQ00610 1675 aaKnown RBP8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 ARHGEF40Q8TER5 1519 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 FESP07332 822 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 FANCCQ00597 558 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 RTN1Q16799 776 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 BABAM1Q9NWV8 329 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 AMOTL2Q9Y2J4 779 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 CCDC160A6NGH7 325 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 IFT88Q13099 833 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 CAVIN4Q5BKX8 364 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 TMTC2Q8N394 836 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 CALML4Q96GE6 196 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 MRPL40Q9NQ50 206 aaKnown RBP8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 ZRANB1Q9UGI0 708 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 USP32Q8NFA0 1604 aa8.25□□□□□ -1.09
SYNPO2-202ENST00000429713 GRID2IPA4D2P6 1211 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 PSEN1P49768 467 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 TRIM47Q96LD4 638 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 VCPKMTQ9H867 229 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 TMEM266Q2M3C6 531 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 ZFAND2BQ8WV99 257 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 MKNK2Q9HBH9 465 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 PRM3Q9NNZ6 103 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 SSX2IPQ9Y2D8 614 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 HYOU1Q9Y4L1 999 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 RILPL1Q5EBL4 403 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 MRFAP1Q9Y605 127 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 PTCH1Q13635 1447 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 A0A1W2PRG0 241 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 O00370 1275 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 ZC3H6P61129 1189 aaKnown RBP8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 UBXN1Q04323 297 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 IFIT1BQ5T764 474 aaKnown RBP8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 G2E3Q7L622 706 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 ELOA2Q8IYF1 753 aaPredicted RBP8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 IGSF22Q8N9C0 903 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 ZBTB9Q96C00 473 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 DSEQ9UL01 958 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 RFX7Q2KHR2 1363 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 PPIP5K2O43314 1243 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 CPA3P15088 417 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 GJA8P48165 433 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 SNX29Q8TEQ0 813 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 DMAP1Q9NPF5 467 aaPredicted RBP8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 KIAA1468Q9P260 1216 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 I3L4J1 428 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 TYW1Q9NV66 732 aaKnown RBP8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 UBA7P41226 1012 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 FAM227BQ96M60 508 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms