RNA–Protein interactions for RNA: ENST00000428892.1

APOBEC3C-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3C, humanhuman

TSL 3

Gene APOBEC3C, Length 1,056 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3C-202ENST00000428892 PATL2C9JE40 543 aaKnown RBP12.89□□□□□ -0.35
APOBEC3C-202ENST00000428892 KIAA0355O15063 1070 aa12.89□□□□□ -0.35
APOBEC3C-202ENST00000428892 AKR1B1P15121 316 aa12.89□□□□□ -0.35
APOBEC3C-202ENST00000428892 GSPT1P15170 499 aaKnown RBP12.89□□□□□ -0.35
APOBEC3C-202ENST00000428892 TMEM132BQ14DG7 1078 aa12.89□□□□□ -0.35
APOBEC3C-202ENST00000428892 TJAP1Q5JTD0 557 aa12.89□□□□□ -0.35
APOBEC3C-202ENST00000428892 IFNL3Q8IZI9 196 aa12.89□□□□□ -0.35
APOBEC3C-202ENST00000428892 IL27Q8NEV9 243 aa12.89□□□□□ -0.35
APOBEC3C-202ENST00000428892 PPM1EQ8WY54 764 aa12.89□□□□□ -0.35
APOBEC3C-202ENST00000428892 CCDC17Q96LX7 622 aa12.89□□□□□ -0.35
APOBEC3C-202ENST00000428892 FAM227BQ96M60 508 aa12.89□□□□□ -0.35
APOBEC3C-202ENST00000428892 HELLSQ9NRZ9 838 aa12.89□□□□□ -0.35
APOBEC3C-202ENST00000428892 ZHX1Q9UKY1 873 aaPredicted RBP12.89□□□□□ -0.35
APOBEC3C-202ENST00000428892 MROH7Q68CQ1 1323 aa12.88□□□□□ -0.35
APOBEC3C-202ENST00000428892 TRIM6-TRIM34B2RNG4 842 aa12.88□□□□□ -0.35
APOBEC3C-202ENST00000428892 SDSP20132 328 aa12.88□□□□□ -0.35
APOBEC3C-202ENST00000428892 ITGB8P26012 769 aa12.88□□□□□ -0.35
APOBEC3C-202ENST00000428892 STAT3P40763 770 aa12.88□□□□□ -0.35
APOBEC3C-202ENST00000428892 SLC4A3P48751 1232 aa12.88□□□□□ -0.35
APOBEC3C-202ENST00000428892 CDK8P49336 464 aa12.88□□□□□ -0.35
APOBEC3C-202ENST00000428892 KIAA1755Q5JYT7 1200 aa12.88□□□□□ -0.35
APOBEC3C-202ENST00000428892 TTC22Q5TAA0 569 aa12.88□□□□□ -0.35
APOBEC3C-202ENST00000428892 VPS53Q5VIR6 699 aa12.88□□□□□ -0.35
APOBEC3C-202ENST00000428892 ZNF467Q7Z7K2 595 aaPredicted RBP12.88□□□□□ -0.35
APOBEC3C-202ENST00000428892 RIOX2Q8IUF8 465 aa12.88□□□□□ -0.35
APOBEC3C-202ENST00000428892 VTI1AQ96AJ9 217 aa12.88□□□□□ -0.35
APOBEC3C-202ENST00000428892 LENG1Q96BZ8 264 aaPredicted RBP12.88□□□□□ -0.35
APOBEC3C-202ENST00000428892 TIFAQ96CG3 184 aa12.88□□□□□ -0.35
APOBEC3C-202ENST00000428892 DDX11Q96FC9 970 aa12.88□□□□□ -0.35
APOBEC3C-202ENST00000428892 GLT1D1Q96MS3 346 aa12.88□□□□□ -0.35
APOBEC3C-202ENST00000428892 SPC25Q9HBM1 224 aa12.88□□□□□ -0.35
APOBEC3C-202ENST00000428892 DIS3Q9Y2L1 958 aaKnown RBP12.88□□□□□ -0.35
APOBEC3C-202ENST00000428892 LAMA4Q16363 1823 aa12.88□□□□□ -0.35
APOBEC3C-202ENST00000428892 SYNRGQ9UMZ2 1314 aa12.88□□□□□ -0.35
APOBEC3C-202ENST00000428892 MOXD2PA6NHM9 499 aa12.87□□□□□ -0.35
APOBEC3C-202ENST00000428892 TNFRSF10AO00220 468 aa12.87□□□□□ -0.35
APOBEC3C-202ENST00000428892 PITPNM1O00562 1244 aa12.87□□□□□ -0.35
APOBEC3C-202ENST00000428892 ACLYP53396 1101 aa12.87□□□□□ -0.35
APOBEC3C-202ENST00000428892 NMIQ13287 307 aaPredicted RBP12.87□□□□□ -0.35
APOBEC3C-202ENST00000428892 GRIN2CQ14957 1233 aa12.87□□□□□ -0.35
APOBEC3C-202ENST00000428892 MCMDC2Q4G0Z9 681 aa12.87□□□□□ -0.35
APOBEC3C-202ENST00000428892 CENPQQ7L2Z9 268 aaPredicted RBP12.87□□□□□ -0.35
APOBEC3C-202ENST00000428892 ZNF589Q86UQ0 364 aaPredicted RBP12.87□□□□□ -0.35
APOBEC3C-202ENST00000428892 RILPL2Q969X0 211 aa12.87□□□□□ -0.35
APOBEC3C-202ENST00000428892 TSEN34Q9BSV6 310 aaKnown RBP12.87□□□□□ -0.35
APOBEC3C-202ENST00000428892 ZNF576Q9H609 170 aa12.87□□□□□ -0.35
APOBEC3C-202ENST00000428892 FAM184BQ9ULE4 1060 aa12.87□□□□□ -0.35
APOBEC3C-202ENST00000428892 PRUNE2Q8WUY3 3088 aa12.87□□□□□ -0.35
APOBEC3C-202ENST00000428892 SPTBN5Q9NRC6 3674 aaKnown RBP12.86□□□□□ -0.35
APOBEC3C-202ENST00000428892 VWA5AO00534 786 aa12.86□□□□□ -0.35
APOBEC3C-202ENST00000428892 TLR3O15455 904 aaKnown RBP12.86□□□□□ -0.35
APOBEC3C-202ENST00000428892 EEF2P13639 858 aaKnown RBP12.86□□□□□ -0.35
APOBEC3C-202ENST00000428892 TAL1P17542 331 aaPredicted RBP12.86□□□□□ -0.35
APOBEC3C-202ENST00000428892 EPHB4P54760 987 aa12.86□□□□□ -0.35
APOBEC3C-202ENST00000428892 FAAP100Q0VG06 881 aa12.86□□□□□ -0.35
APOBEC3C-202ENST00000428892 PPIGQ13427 754 aaKnown RBP eCLIP12.86□□□□□ -0.35
APOBEC3C-202ENST00000428892 ZNF792Q3KQV3 632 aa12.86□□□□□ -0.35
APOBEC3C-202ENST00000428892 FAM83BQ5T0W9 1011 aa12.86□□□□□ -0.35
APOBEC3C-202ENST00000428892 SIAH1Q8IUQ4 282 aa12.86□□□□□ -0.35
APOBEC3C-202ENST00000428892 TMEM199Q8N511 208 aa12.86□□□□□ -0.35
APOBEC3C-202ENST00000428892 TOX2Q96NM4 488 aa12.86□□□□□ -0.35
APOBEC3C-202ENST00000428892 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.86□□□□□ -0.35
APOBEC3C-202ENST00000428892 KANSL2Q9H9L4 492 aa12.86□□□□□ -0.35
APOBEC3C-202ENST00000428892 FBXO28Q9NVF7 368 aa12.86□□□□□ -0.35
APOBEC3C-202ENST00000428892 PPP1R9AQ9ULJ8 1098 aa12.86□□□□□ -0.35
APOBEC3C-202ENST00000428892 ZMYM6O95789 1325 aa12.86□□□□□ -0.35
APOBEC3C-202ENST00000428892 ADAMTS4O75173 837 aa12.85□□□□□ -0.35
APOBEC3C-202ENST00000428892 TIMP1P01033 207 aa12.85□□□□□ -0.35
APOBEC3C-202ENST00000428892 C6orf222P0C671 652 aaPredicted RBP12.85□□□□□ -0.35
APOBEC3C-202ENST00000428892 ZNF865P0CJ78 1059 aaPredicted RBP12.85□□□□□ -0.35
APOBEC3C-202ENST00000428892 RASA1P20936 1047 aa12.85□□□□□ -0.35
APOBEC3C-202ENST00000428892 TDO2P48775 406 aa12.85□□□□□ -0.35
APOBEC3C-202ENST00000428892 ALX1Q15699 326 aa12.85□□□□□ -0.35
APOBEC3C-202ENST00000428892 SNRNP48Q6IEG0 339 aaKnown RBP12.85□□□□□ -0.35
APOBEC3C-202ENST00000428892 PSRC1Q6PGN9 363 aaPredicted RBP12.85□□□□□ -0.35
APOBEC3C-202ENST00000428892 ANKRD33Q7Z3H0 272 aa12.85□□□□□ -0.35
APOBEC3C-202ENST00000428892 MSL3Q8N5Y2 521 aaKnown RBP12.85□□□□□ -0.35
APOBEC3C-202ENST00000428892 PCSK9Q8NBP7 692 aaKnown RBP12.85□□□□□ -0.35
APOBEC3C-202ENST00000428892 SLF1Q9BQI6 1058 aa12.85□□□□□ -0.35
APOBEC3C-202ENST00000428892 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.85□□□□□ -0.352e-6■■□□□ 12.6
APOBEC3C-202ENST00000428892 TEX13BQ9BXU2 312 aa12.85□□□□□ -0.35
APOBEC3C-202ENST00000428892 NACAP1Q9BZK3 213 aa12.85□□□□□ -0.35
APOBEC3C-202ENST00000428892 CCDC171Q6TFL3 1326 aa12.85□□□□□ -0.35
APOBEC3C-202ENST00000428892 SYNGAP1Q96PV0 1343 aa12.85□□□□□ -0.35
APOBEC3C-202ENST00000428892 MINDY4BA8MYZ0 360 aa12.84□□□□□ -0.35
APOBEC3C-202ENST00000428892 APPP05067 770 aa12.84□□□□□ -0.35
APOBEC3C-202ENST00000428892 HSPD1P10809 573 aaKnown RBP12.84□□□□□ -0.35
APOBEC3C-202ENST00000428892 COL9A1P20849 921 aa12.84□□□□□ -0.35
APOBEC3C-202ENST00000428892 KCNA10Q16322 511 aa12.84□□□□□ -0.35
APOBEC3C-202ENST00000428892 MFSD5Q6N075 450 aa12.84□□□□□ -0.35
APOBEC3C-202ENST00000428892 USP38Q8NB14 1042 aa12.84□□□□□ -0.35
APOBEC3C-202ENST00000428892 PPP1R12CQ9BZL4 782 aa12.84□□□□□ -0.35
APOBEC3C-202ENST00000428892 NAPBQ9H115 298 aa12.84□□□□□ -0.35
APOBEC3C-202ENST00000428892 MTIF3Q9H2K0 278 aaKnown RBP12.84□□□□□ -0.35
APOBEC3C-202ENST00000428892 THEGQ9P2T0 379 aa12.84□□□□□ -0.35
APOBEC3C-202ENST00000428892 ANAPC4Q9UJX5 808 aa12.84□□□□□ -0.35
APOBEC3C-202ENST00000428892 ZNF214Q9UL59 606 aaPredicted RBP12.84□□□□□ -0.35
APOBEC3C-202ENST00000428892 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.84□□□□□ -0.35
APOBEC3C-202ENST00000428892 PLIN4Q96Q06 1357 aa12.83□□□□□ -0.36
APOBEC3C-202ENST00000428892 IGKV6D-41A0A0C4DH26 115 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms