RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 DDX58O95786 925 aaKnown RBP17.86■□□□□ 0.45
C9orf3-206ENST00000428313 TOB1P50616 345 aaPredicted RBP17.86■□□□□ 0.45
C9orf3-206ENST00000428313 UBXN1Q04323 297 aa17.86■□□□□ 0.45
C9orf3-206ENST00000428313 CDC37Q16543 378 aaPredicted RBP17.86■□□□□ 0.45
C9orf3-206ENST00000428313 SLC30A9Q6PML9 568 aa17.86■□□□□ 0.45
C9orf3-206ENST00000428313 RAB11FIP4Q86YS3 637 aa17.86■□□□□ 0.45
C9orf3-206ENST00000428313 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.86■□□□□ 0.454e-8■■■■■ 159.8
C9orf3-206ENST00000428313 PAGE5Q96GU1 130 aa17.86■□□□□ 0.45
C9orf3-206ENST00000428313 ZNF570Q96NI8 536 aa17.86■□□□□ 0.45
C9orf3-206ENST00000428313 MOV10L1Q9BXT6 1211 aaKnown RBP17.86■□□□□ 0.45
C9orf3-206ENST00000428313 PLEKHG1Q9ULL1 1385 aa17.86■□□□□ 0.45
C9orf3-206ENST00000428313 A6NHS1 94 aa17.86■□□□□ 0.45
C9orf3-206ENST00000428313 IFIT3O14879 490 aaKnown RBP17.86■□□□□ 0.45
C9orf3-206ENST00000428313 ALADP13716 330 aa17.86■□□□□ 0.45
C9orf3-206ENST00000428313 PAFAH1B1P43034 410 aa17.86■□□□□ 0.45
C9orf3-206ENST00000428313 RFX5P48382 616 aaPredicted RBP17.86■□□□□ 0.45
C9orf3-206ENST00000428313 PPARAQ07869 468 aa17.86■□□□□ 0.45
C9orf3-206ENST00000428313 BIRC3Q13489 604 aa17.86■□□□□ 0.45
C9orf3-206ENST00000428313 PPP1R7Q15435 360 aa17.86■□□□□ 0.45
C9orf3-206ENST00000428313 CCDC181Q5TID7 509 aa17.86■□□□□ 0.45
C9orf3-206ENST00000428313 RALYLQ86SE5 291 aaKnown RBP17.86■□□□□ 0.45
C9orf3-206ENST00000428313 PLCB1Q9NQ66 1216 aa17.86■□□□□ 0.45
C9orf3-206ENST00000428313 H7C1W4 665 aa17.85■□□□□ 0.45
C9orf3-206ENST00000428313 CAND2O75155 1236 aa17.85■□□□□ 0.45
C9orf3-206ENST00000428313 FERP16591 822 aa17.85■□□□□ 0.45
C9orf3-206ENST00000428313 HSPA9P38646 679 aaKnown RBP17.85■□□□□ 0.45
C9orf3-206ENST00000428313 CWF19L1Q69YN2 538 aaKnown RBP17.85■□□□□ 0.45
C9orf3-206ENST00000428313 PSMD1Q99460 953 aa17.85■□□□□ 0.45
C9orf3-206ENST00000428313 PAIP2Q9BPZ3 127 aaKnown RBP17.85■□□□□ 0.45
C9orf3-206ENST00000428313 NDST4Q9H3R1 872 aa17.85■□□□□ 0.45
C9orf3-206ENST00000428313 PTPN12Q05209 780 aaKnown RBP17.84■□□□□ 0.45
C9orf3-206ENST00000428313 APLFQ8IW19 511 aaPredicted RBP17.84■□□□□ 0.45
C9orf3-206ENST00000428313 MB21D1Q8N884 522 aa17.84■□□□□ 0.45
C9orf3-206ENST00000428313 CCDC63Q8NA47 563 aa17.84■□□□□ 0.45
C9orf3-206ENST00000428313 RBM33Q96EV2 1170 aaKnown RBP17.84■□□□□ 0.45
C9orf3-206ENST00000428313 ZNHIT6Q9NWK9 470 aaKnown RBP17.84■□□□□ 0.45
C9orf3-206ENST00000428313 AATFQ9NY61 560 aaKnown RBP eCLIP17.84■□□□□ 0.45
C9orf3-206ENST00000428313 SLC5A4Q9NY91 659 aa17.84■□□□□ 0.45
C9orf3-206ENST00000428313 NFU1Q9UMS0 254 aa17.84■□□□□ 0.45
C9orf3-206ENST00000428313 SLC12A4Q9UP95 1085 aa17.84■□□□□ 0.45
C9orf3-206ENST00000428313 DIP2BQ9P265 1576 aa17.84■□□□□ 0.45
C9orf3-206ENST00000428313 CCT8L1PA6NM43 557 aa17.84■□□□□ 0.45
C9orf3-206ENST00000428313 FAM153BP0C7A2 387 aa17.84■□□□□ 0.45
C9orf3-206ENST00000428313 CDK17Q00537 523 aa17.84■□□□□ 0.45
C9orf3-206ENST00000428313 FAM153CQ494X1 144 aa17.84■□□□□ 0.45
C9orf3-206ENST00000428313 ANKRD27Q96NW4 1050 aa17.84■□□□□ 0.45
C9orf3-206ENST00000428313 TAF1DQ9H5J8 278 aaPredicted RBP17.84■□□□□ 0.45
C9orf3-206ENST00000428313 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.84■□□□□ 0.45
C9orf3-206ENST00000428313 RNF14Q9UBS8 474 aa17.84■□□□□ 0.45
C9orf3-206ENST00000428313 FAM153AQ9UHL3 310 aa17.84■□□□□ 0.45
C9orf3-206ENST00000428313 MACROD2A1Z1Q3 448 aa17.83■□□□□ 0.45
C9orf3-206ENST00000428313 LGALS16A8MUM7 142 aa17.83■□□□□ 0.45
C9orf3-206ENST00000428313 GCOM1H8Y6P7 765 aaPredicted RBP17.83■□□□□ 0.45
C9orf3-206ENST00000428313 M0R2C6 588 aa17.83■□□□□ 0.45
C9orf3-206ENST00000428313 MYZAPP0CAP1 466 aa17.83■□□□□ 0.45
C9orf3-206ENST00000428313 HPDP32754 393 aaPredicted RBP17.83■□□□□ 0.45
C9orf3-206ENST00000428313 IARSP41252 1262 aaKnown RBP17.83■□□□□ 0.45
C9orf3-206ENST00000428313 MATR3P43243 847 aaKnown RBP eCLIP17.83■□□□□ 0.454e-6■■□□□ 13.2
C9orf3-206ENST00000428313 CARSP49589 748 aaKnown RBP17.83■□□□□ 0.45
C9orf3-206ENST00000428313 ZNF268Q14587 947 aaPredicted RBP17.83■□□□□ 0.45
C9orf3-206ENST00000428313 THEMIS2Q5TEJ8 643 aa17.83■□□□□ 0.45
C9orf3-206ENST00000428313 NHEJ1Q9H9Q4 299 aaPredicted RBP17.83■□□□□ 0.45
C9orf3-206ENST00000428313 STRN4Q9NRL3 753 aa17.83■□□□□ 0.45
C9orf3-206ENST00000428313 ANGEL1Q9UNK9 670 aaKnown RBP17.83■□□□□ 0.45
C9orf3-206ENST00000428313 PLAAQ9Y263 795 aa17.83■□□□□ 0.45
C9orf3-206ENST00000428313 PIK3C2AO00443 1686 aa17.83■□□□□ 0.45
C9orf3-206ENST00000428313 USO1O60763 962 aaKnown RBP17.83■□□□□ 0.44
C9orf3-206ENST00000428313 TRIM37O94972 964 aa17.83■□□□□ 0.44
C9orf3-206ENST00000428313 ROR2Q01974 943 aaKnown RBP17.83■□□□□ 0.44
C9orf3-206ENST00000428313 PAK1Q13153 545 aa17.83■□□□□ 0.44
C9orf3-206ENST00000428313 SAFBQ15424 915 aaKnown RBP eCLIP17.83■□□□□ 0.44
C9orf3-206ENST00000428313 TBC1D25Q3MII6 688 aa17.83■□□□□ 0.44
C9orf3-206ENST00000428313 SMYD4Q8IYR2 804 aaPredicted RBP17.83■□□□□ 0.44
C9orf3-206ENST00000428313 EIF1ADQ8N9N8 165 aaKnown RBP17.83■□□□□ 0.44
C9orf3-206ENST00000428313 WASF1Q92558 559 aa17.83■□□□□ 0.44
C9orf3-206ENST00000428313 YIPF3Q9GZM5 350 aa17.83■□□□□ 0.44
C9orf3-206ENST00000428313 CSRNP2Q9H175 543 aa17.83■□□□□ 0.44
C9orf3-206ENST00000428313 ESF1Q9H501 851 aaKnown RBP17.83■□□□□ 0.44
C9orf3-206ENST00000428313 PCDHGC5Q9Y5F6 944 aa17.83■□□□□ 0.44
C9orf3-206ENST00000428313 TNRQ92752 1358 aa17.83■□□□□ 0.44
C9orf3-206ENST00000428313 LINGO3P0C6S8 592 aa17.82■□□□□ 0.44
C9orf3-206ENST00000428313 PROSER3Q2NL68 480 aa17.82■□□□□ 0.44
C9orf3-206ENST00000428313 CCDC38Q502W7 563 aa17.82■□□□□ 0.44
C9orf3-206ENST00000428313 AGBL2Q5U5Z8 902 aa17.82■□□□□ 0.44
C9orf3-206ENST00000428313 MAATS1Q7Z4T9 603 aa17.82■□□□□ 0.44
C9orf3-206ENST00000428313 FOXP1Q9H334 677 aaPredicted RBP17.82■□□□□ 0.44
C9orf3-206ENST00000428313 SWAP70Q9UH65 585 aa17.82■□□□□ 0.44
C9orf3-206ENST00000428313 MYH13Q9UKX3 1938 aa17.82■□□□□ 0.44
C9orf3-206ENST00000428313 KCNQ3O43525 872 aa17.82■□□□□ 0.44
C9orf3-206ENST00000428313 ORC4O43929 436 aa17.82■□□□□ 0.44
C9orf3-206ENST00000428313 GLI1P08151 1106 aa17.82■□□□□ 0.44
C9orf3-206ENST00000428313 CCND1P24385 295 aa17.82■□□□□ 0.44
C9orf3-206ENST00000428313 AFMP43652 599 aa17.82■□□□□ 0.44
C9orf3-206ENST00000428313 GCLCP48506 637 aaPredicted RBP17.82■□□□□ 0.44
C9orf3-206ENST00000428313 PAPOLAP51003 745 aaKnown RBP17.82■□□□□ 0.44
C9orf3-206ENST00000428313 SNX1Q13596 522 aa17.82■□□□□ 0.44
C9orf3-206ENST00000428313 NTRK3Q16288 839 aa17.82■□□□□ 0.44
C9orf3-206ENST00000428313 EPHA10Q5JZY3 1008 aa17.82■□□□□ 0.44
C9orf3-206ENST00000428313 RUFY4Q6ZNE9 571 aa17.82■□□□□ 0.44
C9orf3-206ENST00000428313 RPUSD2Q8IZ73 545 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms