RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 NUP88Q99567 741 aaPredicted RBP8.85□□□□□ -0.99
LRCH3-204ENST00000428136 DDX60LQ5H9U9 1706 aaKnown RBP8.85□□□□□ -0.99
LRCH3-204ENST00000428136 FLT1P17948 1338 aa8.85□□□□□ -0.99
LRCH3-204ENST00000428136 TTC26A0AVF1 554 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 STXBP3O00186 592 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 SRGNP10124 158 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 SMARCA1P28370 1054 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 CDK17Q00537 523 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 UBXN1Q04323 297 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 ORC2Q13416 577 aaPredicted RBP8.84□□□□□ -0.99
LRCH3-204ENST00000428136 WDR59Q6PJI9 974 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 HDXQ7Z353 690 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 TXLNBQ8N3L3 684 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 RETREG2Q8NC44 543 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 CCDC148Q8NFR7 591 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 EXOC4Q96A65 974 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 TMEM60Q9H2L4 133 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 HAUS4Q9H6D7 363 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 MYH1P12882 1939 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 CYTH3O43739 400 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 COBLO75128 1261 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 PPP1R2P41236 205 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 DNM2P50570 870 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 PMS1P54277 932 aaKnown RBP8.84□□□□□ -0.99
LRCH3-204ENST00000428136 TFAP4Q01664 338 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 MUM1L1Q5H9M0 696 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 PAPD7Q5XG87 772 aaKnown RBP8.84□□□□□ -0.99
LRCH3-204ENST00000428136 ZSCAN29Q8IWY8 852 aaPredicted RBP8.84□□□□□ -0.99
LRCH3-204ENST00000428136 STAG2Q8N3U4 1231 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 LRRC15Q8TF66 581 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 CHP1Q99653 195 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 DUSP9Q99956 384 aaKnown RBP8.84□□□□□ -0.99
LRCH3-204ENST00000428136 C7orf25Q9BPX7 421 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 NUP58Q9BVL2 599 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 NARFQ9UHQ1 456 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 MYO6Q9UM54 1294 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 NAV1Q8NEY1 1877 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 RASSF10A6NK89 507 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 ERLIN1O75477 346 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 NOVP48745 357 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 FIGNQ5HY92 759 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 ZMYND12Q9H0C1 365 aa8.84□□□□□ -0.99
LRCH3-204ENST00000428136 PUF60Q9UHX1 559 aaKnown RBP8.84□□□□□ -0.99
LRCH3-204ENST00000428136 A0A1W2PQJ5 194 aa8.83□□□□□ -1
LRCH3-204ENST00000428136 CTAGE15A4D2H0 777 aa8.83□□□□□ -1
LRCH3-204ENST00000428136 H3BQF6 201 aa8.83□□□□□ -1
LRCH3-204ENST00000428136 USP17L8P0C7I0 530 aa8.83□□□□□ -1
LRCH3-204ENST00000428136 CTAGE8P0CG41 777 aa8.83□□□□□ -1
LRCH3-204ENST00000428136 HERVK_113P62684 666 aa8.83□□□□□ -1
LRCH3-204ENST00000428136 C15orf52Q6ZUT6 534 aaKnown RBP8.83□□□□□ -1
LRCH3-204ENST00000428136 CTAGE6Q86UF2 777 aa8.83□□□□□ -1
LRCH3-204ENST00000428136 CTAGE4Q8IX94 777 aa8.83□□□□□ -1
LRCH3-204ENST00000428136 NLRP3Q96P20 1036 aa8.83□□□□□ -1
LRCH3-204ENST00000428136 PURBQ96QR8 312 aaKnown RBP8.83□□□□□ -1
LRCH3-204ENST00000428136 SLF1Q9BQI6 1058 aa8.83□□□□□ -1
LRCH3-204ENST00000428136 SPZ1Q9BXG8 430 aa8.83□□□□□ -1
LRCH3-204ENST00000428136 GBP3Q9H0R5 595 aa8.83□□□□□ -1
LRCH3-204ENST00000428136 MCM9Q9NXL9 1143 aa8.83□□□□□ -1
LRCH3-204ENST00000428136 LUC7L2Q9Y383 392 aaKnown RBP8.83□□□□□ -1
LRCH3-204ENST00000428136 CCDC194A0A1B0GVG4 234 aa8.83□□□□□ -1
LRCH3-204ENST00000428136 TULP2O00295 520 aa8.83□□□□□ -1
LRCH3-204ENST00000428136 PSMA7O14818 248 aa8.83□□□□□ -1
LRCH3-204ENST00000428136 ST5P78524 1137 aa8.83□□□□□ -1
LRCH3-204ENST00000428136 STIM1Q13586 685 aa8.83□□□□□ -1
LRCH3-204ENST00000428136 CCDC170Q8IYT3 715 aa8.83□□□□□ -1
LRCH3-204ENST00000428136 GPKOWQ92917 476 aaPredicted RBP eCLIP8.83□□□□□ -1
LRCH3-204ENST00000428136 IQCDQ96DY2 449 aa8.83□□□□□ -1
LRCH3-204ENST00000428136 ZCCHC17Q9NP64 241 aaKnown RBP8.83□□□□□ -1
LRCH3-204ENST00000428136 TFCP2L1Q9NZI6 479 aa8.83□□□□□ -1
LRCH3-204ENST00000428136 TRIM49BA6NDI0 452 aa8.82□□□□□ -1
LRCH3-204ENST00000428136 POLR3GO15318 223 aaPredicted RBP8.82□□□□□ -1
LRCH3-204ENST00000428136 HOXA7P31268 230 aaPredicted RBP8.82□□□□□ -1
LRCH3-204ENST00000428136 WDR66Q8TBY9 1149 aa8.82□□□□□ -1
LRCH3-204ENST00000428136 ABCB6Q9NP58 842 aa8.82□□□□□ -1
LRCH3-204ENST00000428136 CDK5RAP2Q96SN8 1893 aa8.82□□□□□ -1
LRCH3-204ENST00000428136 EIF3CLB5ME19 914 aaKnown RBP8.82□□□□□ -1
LRCH3-204ENST00000428136 KCNQ2O43526 872 aa8.82□□□□□ -1
LRCH3-204ENST00000428136 CCNE1P24864 410 aa8.82□□□□□ -1
LRCH3-204ENST00000428136 HNRNPH3P31942 346 aaKnown RBP8.82□□□□□ -1
LRCH3-204ENST00000428136 UBA7P41226 1012 aa8.82□□□□□ -1
LRCH3-204ENST00000428136 KRT83P78385 493 aa8.82□□□□□ -1
LRCH3-204ENST00000428136 TXNRD3Q86VQ6 643 aa8.82□□□□□ -1
LRCH3-204ENST00000428136 CERS3Q8IU89 383 aa8.82□□□□□ -1
LRCH3-204ENST00000428136 RASGRP4Q8TDF6 673 aa8.82□□□□□ -1
LRCH3-204ENST00000428136 RPGRIP1Q96KN7 1286 aa8.82□□□□□ -1
LRCH3-204ENST00000428136 ERGIC2Q96RQ1 377 aa8.82□□□□□ -1
LRCH3-204ENST00000428136 EIF3CQ99613 913 aaKnown RBP8.82□□□□□ -1
LRCH3-204ENST00000428136 VIPAS39Q9H9C1 493 aa8.82□□□□□ -1
LRCH3-204ENST00000428136 EXOC1Q9NV70 894 aa8.82□□□□□ -1
LRCH3-204ENST00000428136 BICDL2A1A5D9 508 aa8.82□□□□□ -1
LRCH3-204ENST00000428136 TARSL2A2RTX5 802 aaKnown RBP8.82□□□□□ -1
LRCH3-204ENST00000428136 RPS6KA4O75676 772 aa8.82□□□□□ -1
LRCH3-204ENST00000428136 HNRNPH2P55795 449 aaKnown RBP8.82□□□□□ -1
LRCH3-204ENST00000428136 VSNL1P62760 191 aa8.82□□□□□ -1
LRCH3-204ENST00000428136 GSTO1P78417 241 aa8.82□□□□□ -1
LRCH3-204ENST00000428136 GPS2Q13227 327 aa8.82□□□□□ -1
LRCH3-204ENST00000428136 FOXR2Q6PJQ5 311 aa8.82□□□□□ -1
LRCH3-204ENST00000428136 EHBP1Q8NDI1 1231 aa8.82□□□□□ -1
LRCH3-204ENST00000428136 P2RX5Q93086 422 aa8.82□□□□□ -1
LRCH3-204ENST00000428136 TMEM47Q9BQJ4 181 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms