RNA–Protein interactions for RNA: ENST00000428130.6

RDH11-202, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2 BASIC

Gene RDH11, Length 1,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-202ENST00000428130 FGD4Q96M96 766 aa12.42□□□□□ -0.42
RDH11-202ENST00000428130 ABHD16BQ9H3Z7 469 aa12.42□□□□□ -0.42
RDH11-202ENST00000428130 HIPK3Q9H422 1215 aa12.42□□□□□ -0.42
RDH11-202ENST00000428130 EPHX3Q9H6B9 360 aa12.42□□□□□ -0.42
RDH11-202ENST00000428130 GOPCQ9HD26 462 aa12.42□□□□□ -0.42
RDH11-202ENST00000428130 LCTP09848 1927 aa12.42□□□□□ -0.42
RDH11-202ENST00000428130 CYP2D7A0A087X1C5 515 aa12.41□□□□□ -0.42
RDH11-202ENST00000428130 PRKAB2O43741 272 aa12.41□□□□□ -0.42
RDH11-202ENST00000428130 C12orf60Q5U649 245 aa12.41□□□□□ -0.42
RDH11-202ENST00000428130 C16orf86Q6ZW13 317 aa12.41□□□□□ -0.42
RDH11-202ENST00000428130 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.41□□□□□ -0.42
RDH11-202ENST00000428130 AACSQ86V21 672 aa12.41□□□□□ -0.42
RDH11-202ENST00000428130 SLF1Q9BQI6 1058 aa12.41□□□□□ -0.42
RDH11-202ENST00000428130 KATNBL1Q9H079 304 aa12.41□□□□□ -0.42
RDH11-202ENST00000428130 WNT8AQ9H1J5 351 aa12.41□□□□□ -0.42
RDH11-202ENST00000428130 ARMT1Q9H993 441 aa12.41□□□□□ -0.42
RDH11-202ENST00000428130 KANSL2Q9H9L4 492 aa12.41□□□□□ -0.42
RDH11-202ENST00000428130 PCDHA11Q9Y5I1 949 aa12.41□□□□□ -0.42
RDH11-202ENST00000428130 WDFY4Q6ZS81 3184 aa12.4□□□□□ -0.42
RDH11-202ENST00000428130 MUC6Q6W4X9 2439 aa12.4□□□□□ -0.42
RDH11-202ENST00000428130 PIEZO1Q92508 2521 aa12.4□□□□□ -0.42
RDH11-202ENST00000428130 RAD21O60216 631 aa12.4□□□□□ -0.42
RDH11-202ENST00000428130 POU3F3P20264 500 aaPredicted RBP12.4□□□□□ -0.42
RDH11-202ENST00000428130 CCL23P55773 120 aa12.4□□□□□ -0.42
RDH11-202ENST00000428130 BEX3Q00994 111 aa12.4□□□□□ -0.42
RDH11-202ENST00000428130 ARMCX2Q7L311 632 aa12.4□□□□□ -0.42
RDH11-202ENST00000428130 VWCEQ96DN2 955 aa12.4□□□□□ -0.42
RDH11-202ENST00000428130 NUP88Q99567 741 aaPredicted RBP12.4□□□□□ -0.42
RDH11-202ENST00000428130 NOC4LQ9BVI4 516 aaKnown RBP12.4□□□□□ -0.42
RDH11-202ENST00000428130 ATP8A2Q9NTI2 1148 aa12.4□□□□□ -0.42
RDH11-202ENST00000428130 MTCH2Q9Y6C9 303 aa12.4□□□□□ -0.42
RDH11-202ENST00000428130 SLC4A7Q9Y6M7 1214 aa12.4□□□□□ -0.42
RDH11-202ENST00000428130 ASTN1O14525 1302 aa12.39□□□□□ -0.43
RDH11-202ENST00000428130 GRIN2DO15399 1336 aa12.39□□□□□ -0.43
RDH11-202ENST00000428130 ATP2A1O14983 1001 aa12.39□□□□□ -0.43
RDH11-202ENST00000428130 SKIV2LQ15477 1246 aaKnown RBP12.39□□□□□ -0.43
RDH11-202ENST00000428130 TMEM31Q5JXX7 168 aa12.39□□□□□ -0.43
RDH11-202ENST00000428130 CXCL17Q6UXB2 119 aa12.39□□□□□ -0.43
RDH11-202ENST00000428130 CCDC144CPQ8IYA2 1237 aa12.39□□□□□ -0.43
RDH11-202ENST00000428130 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.39□□□□□ -0.43
RDH11-202ENST00000428130 C11orf16Q9NQ32 467 aa12.39□□□□□ -0.43
RDH11-202ENST00000428130 EXOC6BQ9Y2D4 811 aa12.39□□□□□ -0.43
RDH11-202ENST00000428130 BRWD1Q9NSI6 2320 aa12.39□□□□□ -0.43
RDH11-202ENST00000428130 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.38□□□□□ -0.43
RDH11-202ENST00000428130 ZNF316A6NFI3 1004 aaPredicted RBP12.38□□□□□ -0.43
RDH11-202ENST00000428130 USP17L12C9JPN9 530 aa12.38□□□□□ -0.43
RDH11-202ENST00000428130 USP17L21D6R901 530 aa12.38□□□□□ -0.43
RDH11-202ENST00000428130 RFXAPO00287 272 aa12.38□□□□□ -0.43
RDH11-202ENST00000428130 GOLIM4O00461 696 aa12.38□□□□□ -0.43
RDH11-202ENST00000428130 TLL1O43897 1013 aa12.38□□□□□ -0.43
RDH11-202ENST00000428130 MBD4O95243 580 aa12.38□□□□□ -0.43
RDH11-202ENST00000428130 SLC4A3P48751 1232 aa12.38□□□□□ -0.43
RDH11-202ENST00000428130 ITGA7Q13683 1181 aa12.38□□□□□ -0.43
RDH11-202ENST00000428130 SLFNL1Q499Z3 407 aa12.38□□□□□ -0.43
RDH11-202ENST00000428130 RPUSD2Q8IZ73 545 aaKnown RBP12.38□□□□□ -0.43
RDH11-202ENST00000428130 CPXCR1Q8N123 301 aa12.38□□□□□ -0.43
RDH11-202ENST00000428130 ANKRD35Q8N283 1001 aa12.38□□□□□ -0.43
RDH11-202ENST00000428130 PRPF38AQ8NAV1 312 aaKnown RBP12.38□□□□□ -0.43
RDH11-202ENST00000428130 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.38□□□□□ -0.43
RDH11-202ENST00000428130 KHSRPQ92945 711 aaKnown RBP eCLIP12.38□□□□□ -0.43
RDH11-202ENST00000428130 DNAJC2Q99543 621 aaKnown RBP12.38□□□□□ -0.43
RDH11-202ENST00000428130 COG5Q9UP83 839 aa12.38□□□□□ -0.43
RDH11-202ENST00000428130 ZBED9Q6R2W3 1325 aa12.37□□□□□ -0.43
RDH11-202ENST00000428130 TET1Q8NFU7 2136 aa12.37□□□□□ -0.43
RDH11-202ENST00000428130 EPOPA6NHQ4 379 aa12.37□□□□□ -0.43
RDH11-202ENST00000428130 ZBBXA8MT70 800 aa12.37□□□□□ -0.43
RDH11-202ENST00000428130 GTPBP6O43824 516 aaPredicted RBP12.37□□□□□ -0.43
RDH11-202ENST00000428130 B4GALT4O60513 344 aa12.37□□□□□ -0.43
RDH11-202ENST00000428130 GPR37L1O60883 481 aa12.37□□□□□ -0.43
RDH11-202ENST00000428130 CABYRO75952 493 aa12.37□□□□□ -0.43
RDH11-202ENST00000428130 CA3P07451 260 aa12.37□□□□□ -0.43
RDH11-202ENST00000428130 ATP2A2P16615 1042 aaKnown RBP12.37□□□□□ -0.43
RDH11-202ENST00000428130 ADD2P35612 726 aa12.37□□□□□ -0.43
RDH11-202ENST00000428130 TNFAIP2Q03169 654 aa12.37□□□□□ -0.43
RDH11-202ENST00000428130 ZKSCAN2Q63HK3 967 aa12.37□□□□□ -0.43
RDH11-202ENST00000428130 ERC1Q8IUD2 1116 aa12.37□□□□□ -0.43
RDH11-202ENST00000428130 AMOTL1Q8IY63 956 aa12.37□□□□□ -0.43
RDH11-202ENST00000428130 SCLYQ96I15 445 aa12.37□□□□□ -0.43
RDH11-202ENST00000428130 AGBL1Q96MI9 1066 aa12.37□□□□□ -0.43
RDH11-202ENST00000428130 SEZ6LQ9BYH1 1024 aa12.37□□□□□ -0.43
RDH11-202ENST00000428130 TRPV6Q9H1D0 765 aa12.37□□□□□ -0.43
RDH11-202ENST00000428130 SLC38A10Q9HBR0 1119 aa12.37□□□□□ -0.43
RDH11-202ENST00000428130 RAVER2Q9HCJ3 691 aaKnown RBP12.37□□□□□ -0.43
RDH11-202ENST00000428130 IL1RAPL2Q9NP60 686 aa12.37□□□□□ -0.43
RDH11-202ENST00000428130 GNEQ9Y223 722 aaKnown RBP12.37□□□□□ -0.43
RDH11-202ENST00000428130 TRIP12Q14669 1992 aaPredicted RBP12.36□□□□□ -0.43
RDH11-202ENST00000428130 F5H6K3 240 aa12.36□□□□□ -0.43
RDH11-202ENST00000428130 ZBED4O75132 1171 aa12.36□□□□□ -0.43
RDH11-202ENST00000428130 NDUFB10O96000 172 aa12.36□□□□□ -0.43
RDH11-202ENST00000428130 PTGS1P23219 599 aa12.36□□□□□ -0.43
RDH11-202ENST00000428130 KLRC3Q07444 240 aa12.36□□□□□ -0.43
RDH11-202ENST00000428130 TTLL4Q14679 1199 aa12.36□□□□□ -0.43
RDH11-202ENST00000428130 FSCN1Q16658 493 aaKnown RBP12.36□□□□□ -0.43
RDH11-202ENST00000428130 TMEM67Q5HYA8 995 aa12.36□□□□□ -0.43
RDH11-202ENST00000428130 KRT40Q6A162 431 aa12.36□□□□□ -0.43
RDH11-202ENST00000428130 CEP85Q6P2H3 762 aa12.36□□□□□ -0.43
RDH11-202ENST00000428130 TLK2Q86UE8 772 aa12.36□□□□□ -0.43
RDH11-202ENST00000428130 CHST13Q8NET6 341 aa12.36□□□□□ -0.43
RDH11-202ENST00000428130 CERS4Q9HA82 394 aa12.36□□□□□ -0.43
RDH11-202ENST00000428130 NYAP2Q9P242 653 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms