RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 ALAS1P13196 640 aa17.45■□□□□ 0.38
RTN4-210ENST00000427710 COPB2P35606 906 aa17.45■□□□□ 0.38
RTN4-210ENST00000427710 ZNF543Q08ER8 600 aa17.45■□□□□ 0.38
RTN4-210ENST00000427710 ZNF792Q3KQV3 632 aa17.45■□□□□ 0.38
RTN4-210ENST00000427710 ANO1Q5XXA6 986 aa17.45■□□□□ 0.38
RTN4-210ENST00000427710 OLFML2BQ68BL8 750 aa17.45■□□□□ 0.38
RTN4-210ENST00000427710 UBAC1Q9BSL1 405 aa17.45■□□□□ 0.38
RTN4-210ENST00000427710 UBA5Q9GZZ9 404 aa17.45■□□□□ 0.38
RTN4-210ENST00000427710 SENP2Q9HC62 589 aa17.45■□□□□ 0.38
RTN4-210ENST00000427710 ANO2Q9NQ90 1003 aa17.45■□□□□ 0.38
RTN4-210ENST00000427710 RNF146Q9NTX7 359 aa17.45■□□□□ 0.38
RTN4-210ENST00000427710 IGHA2P01877 340 aa17.44■□□□□ 0.38
RTN4-210ENST00000427710 SNHG28P0DPA3 235 aa17.44■□□□□ 0.38
RTN4-210ENST00000427710 OAZ1P54368 228 aa17.44■□□□□ 0.38
RTN4-210ENST00000427710 TRDNQ13061 729 aa17.44■□□□□ 0.38
RTN4-210ENST00000427710 COL9A3Q14050 684 aaPredicted RBP17.44■□□□□ 0.38
RTN4-210ENST00000427710 SEC23AQ15436 765 aa17.44■□□□□ 0.38
RTN4-210ENST00000427710 CCDC178Q5BJE1 867 aa17.44■□□□□ 0.38
RTN4-210ENST00000427710 MUM1L1Q5H9M0 696 aa17.44■□□□□ 0.38
RTN4-210ENST00000427710 BTNL9Q6UXG8 535 aa17.44■□□□□ 0.38
RTN4-210ENST00000427710 ANKS1AQ92625 1134 aa17.44■□□□□ 0.38
RTN4-210ENST00000427710 DDX11Q96FC9 970 aa17.44■□□□□ 0.38
RTN4-210ENST00000427710 TRERF1Q96PN7 1200 aa17.44■□□□□ 0.38
RTN4-210ENST00000427710 RANBP17Q9H2T7 1088 aaKnown RBP17.44■□□□□ 0.38
RTN4-210ENST00000427710 SLC5A4Q9NY91 659 aa17.44■□□□□ 0.38
RTN4-210ENST00000427710 SLC27A2O14975 620 aa17.43■□□□□ 0.38
RTN4-210ENST00000427710 CDC45O75419 566 aa17.43■□□□□ 0.38
RTN4-210ENST00000427710 FDX1P10109 184 aa17.43■□□□□ 0.38
RTN4-210ENST00000427710 CYBAP13498 195 aa17.43■□□□□ 0.38
RTN4-210ENST00000427710 IFIT1BQ5T764 474 aaKnown RBP17.43■□□□□ 0.38
RTN4-210ENST00000427710 LHX8Q68G74 356 aa17.43■□□□□ 0.38
RTN4-210ENST00000427710 UBE2Q1Q7Z7E8 422 aa17.43■□□□□ 0.38
RTN4-210ENST00000427710 RALYLQ86SE5 291 aaKnown RBP17.43■□□□□ 0.38
RTN4-210ENST00000427710 ANKRD35Q8N283 1001 aa17.43■□□□□ 0.38
RTN4-210ENST00000427710 CHST13Q8NET6 341 aa17.43■□□□□ 0.38
RTN4-210ENST00000427710 PAWRQ96IZ0 340 aaKnown RBP17.43■□□□□ 0.38
RTN4-210ENST00000427710 PPP4R2Q9NY27 417 aa17.43■□□□□ 0.38
RTN4-210ENST00000427710 CCPG1Q9ULG6 757 aa17.43■□□□□ 0.38
RTN4-210ENST00000427710 IFIT3O14879 490 aaKnown RBP17.42■□□□□ 0.38
RTN4-210ENST00000427710 MNX1P50219 401 aaPredicted RBP17.42■□□□□ 0.38
RTN4-210ENST00000427710 ANTXR2P58335 489 aa17.42■□□□□ 0.38
RTN4-210ENST00000427710 CREB3L3Q68CJ9 461 aa17.42■□□□□ 0.38
RTN4-210ENST00000427710 NCOA7Q8NI08 942 aa17.42■□□□□ 0.38
RTN4-210ENST00000427710 ACAD9Q9H845 621 aa17.42■□□□□ 0.38
RTN4-210ENST00000427710 OGDHLQ9ULD0 1010 aa17.42■□□□□ 0.38
RTN4-210ENST00000427710 DNAJC25-GNG10A0A024R161 153 aa17.41■□□□□ 0.38
RTN4-210ENST00000427710 NT5C2P49902 561 aa17.41■□□□□ 0.38
RTN4-210ENST00000427710 CNTN2Q02246 1040 aa17.41■□□□□ 0.38
RTN4-210ENST00000427710 MB21D2Q8IYB1 491 aaPredicted RBP17.41■□□□□ 0.38
RTN4-210ENST00000427710 STAG2Q8N3U4 1231 aa17.41■□□□□ 0.38
RTN4-210ENST00000427710 FGD4Q96M96 766 aa17.41■□□□□ 0.38
RTN4-210ENST00000427710 TINF2Q9BSI4 451 aa17.41■□□□□ 0.38
RTN4-210ENST00000427710 VAT1LQ9HCJ6 419 aa17.41■□□□□ 0.38
RTN4-210ENST00000427710 A1CFQ9NQ94 594 aaKnown RBP17.41■□□□□ 0.38
RTN4-210ENST00000427710 GPHNQ9NQX3 736 aaPredicted RBP17.41■□□□□ 0.38
RTN4-210ENST00000427710 DDX20Q9UHI6 824 aaKnown RBP17.41■□□□□ 0.38
RTN4-210ENST00000427710 DDX49Q9Y6V7 483 aaKnown RBP17.41■□□□□ 0.38
RTN4-210ENST00000427710 ICAM1P05362 532 aa17.4■□□□□ 0.38
RTN4-210ENST00000427710 NECTIN1Q15223 517 aa17.4■□□□□ 0.38
RTN4-210ENST00000427710 PURBQ96QR8 312 aaKnown RBP17.4■□□□□ 0.38
RTN4-210ENST00000427710 FBXO40Q9UH90 709 aa17.4■□□□□ 0.38
RTN4-210ENST00000427710 DIS3Q9Y2L1 958 aaKnown RBP17.4■□□□□ 0.38
RTN4-210ENST00000427710 PARP1P09874 1014 aaKnown RBP17.39■□□□□ 0.37
RTN4-210ENST00000427710 WTAPQ15007 396 aa17.39■□□□□ 0.37
RTN4-210ENST00000427710 TKFCQ3LXA3 575 aa17.39■□□□□ 0.37
RTN4-210ENST00000427710 TMEM67Q5HYA8 995 aa17.39■□□□□ 0.37
RTN4-210ENST00000427710 GPATCH4Q5T3I0 446 aaKnown RBP17.39■□□□□ 0.37
RTN4-210ENST00000427710 NSMFQ6X4W1 530 aa17.39■□□□□ 0.37
RTN4-210ENST00000427710 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.39■□□□□ 0.37
RTN4-210ENST00000427710 ADGRF4Q8IZF3 695 aa17.39■□□□□ 0.37
RTN4-210ENST00000427710 DPF3Q92784 378 aa17.39■□□□□ 0.37
RTN4-210ENST00000427710 SOWAHBA6NEL2 793 aa17.38■□□□□ 0.37
RTN4-210ENST00000427710 POTEB2H3BUK9 544 aa17.38■□□□□ 0.37
RTN4-210ENST00000427710 NFIBO00712 420 aa17.38■□□□□ 0.37
RTN4-210ENST00000427710 DHX16O60231 1041 aaKnown RBP17.38■□□□□ 0.37
RTN4-210ENST00000427710 USH1GQ495M9 461 aa17.38■□□□□ 0.37
RTN4-210ENST00000427710 ASPRV1Q53RT3 343 aa17.38■□□□□ 0.37
RTN4-210ENST00000427710 CASC1Q6TDU7 716 aa17.38■□□□□ 0.37
RTN4-210ENST00000427710 LENG1Q96BZ8 264 aaPredicted RBP17.38■□□□□ 0.37
RTN4-210ENST00000427710 LRRC2Q9BYS8 371 aa17.38■□□□□ 0.37
RTN4-210ENST00000427710 LRRC37A2A6NM11 1700 aa17.38■□□□□ 0.37
RTN4-210ENST00000427710 ERICH2A1L162 156 aa17.37■□□□□ 0.37
RTN4-210ENST00000427710 PRC1O43663 620 aa17.37■□□□□ 0.37
RTN4-210ENST00000427710 SNAI1O95863 264 aaPredicted RBP17.37■□□□□ 0.37
RTN4-210ENST00000427710 MYCNP04198 464 aaPredicted RBP17.37■□□□□ 0.37
RTN4-210ENST00000427710 ZNF865P0CJ78 1059 aaPredicted RBP17.37■□□□□ 0.37
RTN4-210ENST00000427710 CDC37Q16543 378 aaPredicted RBP17.37■□□□□ 0.37
RTN4-210ENST00000427710 NECAB2Q7Z6G3 386 aa17.37■□□□□ 0.37
RTN4-210ENST00000427710 FAM133AQ8N9E0 248 aa17.37■□□□□ 0.37
RTN4-210ENST00000427710 ANKLE1Q8NAG6 615 aa17.37■□□□□ 0.37
RTN4-210ENST00000427710 IGDCC4Q8TDY8 1250 aa17.37■□□□□ 0.37
RTN4-210ENST00000427710 CLEC4DQ8WXI8 215 aa17.37■□□□□ 0.37
RTN4-210ENST00000427710 MAD2L2Q9UI95 211 aa17.37■□□□□ 0.37
RTN4-210ENST00000427710 ZHX1Q9UKY1 873 aaPredicted RBP17.37■□□□□ 0.37
RTN4-210ENST00000427710 SEPT4O43236 478 aa17.36■□□□□ 0.37
RTN4-210ENST00000427710 BAATQ14032 418 aaPredicted RBP17.36■□□□□ 0.37
RTN4-210ENST00000427710 SLC35G1Q2M3R5 365 aa17.36■□□□□ 0.37
RTN4-210ENST00000427710 GJC2Q5T442 439 aaPredicted RBP17.36■□□□□ 0.37
RTN4-210ENST00000427710 ARMCX2Q7L311 632 aa17.36■□□□□ 0.37
RTN4-210ENST00000427710 RAB11FIP4Q86YS3 637 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms