RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 EXOSC10Q01780 885 aaKnown RBP18.35■□□□□ 0.53
CLK3P2-201ENST00000427566 WTAPQ15007 396 aa18.35■□□□□ 0.53
CLK3P2-201ENST00000427566 U2AF1L4Q8WU68 220 aaKnown RBP18.35■□□□□ 0.53
CLK3P2-201ENST00000427566 DCAF4Q8WV16 495 aa18.35■□□□□ 0.53
CLK3P2-201ENST00000427566 JAKMIP1Q96N16 626 aaKnown RBP18.35■□□□□ 0.53
CLK3P2-201ENST00000427566 CPVLQ9H3G5 476 aa18.35■□□□□ 0.53
CLK3P2-201ENST00000427566 LY9Q9HBG7 655 aa18.35■□□□□ 0.53
CLK3P2-201ENST00000427566 FRMPD3Q5JV73 1810 aa18.35■□□□□ 0.53
CLK3P2-201ENST00000427566 TFRCP02786 760 aaKnown RBP18.34■□□□□ 0.53
CLK3P2-201ENST00000427566 COPB2P35606 906 aa18.34■□□□□ 0.53
CLK3P2-201ENST00000427566 GJA8P48165 433 aa18.34■□□□□ 0.53
CLK3P2-201ENST00000427566 KCTD2Q14681 263 aa18.34■□□□□ 0.53
CLK3P2-201ENST00000427566 CCDC174Q6PII3 467 aa18.34■□□□□ 0.53
CLK3P2-201ENST00000427566 SLC38A10Q9HBR0 1119 aa18.34■□□□□ 0.53
CLK3P2-201ENST00000427566 SLC5A4Q9NY91 659 aa18.34■□□□□ 0.53
CLK3P2-201ENST00000427566 FLRT1Q9NZU1 646 aa18.34■□□□□ 0.53
CLK3P2-201ENST00000427566 SMCHD1A6NHR9 2005 aa18.34■□□□□ 0.53
CLK3P2-201ENST00000427566 RPTORQ8N122 1335 aa18.34■□□□□ 0.53
CLK3P2-201ENST00000427566 ERICH2A1L162 156 aa18.33■□□□□ 0.53
CLK3P2-201ENST00000427566 SH2B2O14492 632 aaPredicted RBP18.33■□□□□ 0.53
CLK3P2-201ENST00000427566 CACNB2Q08289 660 aaPredicted RBP18.33■□□□□ 0.53
CLK3P2-201ENST00000427566 ZNF543Q08ER8 600 aa18.33■□□□□ 0.53
CLK3P2-201ENST00000427566 KRT32Q14532 448 aa18.33■□□□□ 0.53
CLK3P2-201ENST00000427566 SART3Q15020 963 aaKnown RBP18.33■□□□□ 0.53
CLK3P2-201ENST00000427566 MFSD14CQ5VZR4 134 aa18.33■□□□□ 0.53
CLK3P2-201ENST00000427566 HOMER2Q9NSB8 354 aa18.33■□□□□ 0.53
CLK3P2-201ENST00000427566 PRR12Q9ULL5 1215 aa18.33■□□□□ 0.53
CLK3P2-201ENST00000427566 RIPK3Q9Y572 518 aa18.33■□□□□ 0.53
CLK3P2-201ENST00000427566 COBLO75128 1261 aa18.33■□□□□ 0.52
CLK3P2-201ENST00000427566 SGPL1O95470 568 aa18.33■□□□□ 0.52
CLK3P2-201ENST00000427566 PGK2P07205 417 aa18.33■□□□□ 0.52
CLK3P2-201ENST00000427566 DHX32Q7L7V1 743 aaKnown RBP18.33■□□□□ 0.52
CLK3P2-201ENST00000427566 STAG2Q8N3U4 1231 aa18.33■□□□□ 0.52
CLK3P2-201ENST00000427566 SHISA4Q96DD7 197 aa18.33■□□□□ 0.52
CLK3P2-201ENST00000427566 DDX11Q96FC9 970 aa18.33■□□□□ 0.52
CLK3P2-201ENST00000427566 MYL10Q9BUA6 226 aa18.33■□□□□ 0.52
CLK3P2-201ENST00000427566 FDX1P10109 184 aa18.32■□□□□ 0.52
CLK3P2-201ENST00000427566 CNGA1P29973 690 aa18.32■□□□□ 0.52
CLK3P2-201ENST00000427566 CCND3P30281 292 aaPredicted RBP18.32■□□□□ 0.52
CLK3P2-201ENST00000427566 CYP2C19P33261 490 aa18.32■□□□□ 0.52
CLK3P2-201ENST00000427566 RAB11FIP4Q86YS3 637 aa18.32■□□□□ 0.52
CLK3P2-201ENST00000427566 ABRAQ8N0Z2 381 aa18.32■□□□□ 0.52
CLK3P2-201ENST00000427566 TMEM87BQ96K49 555 aa18.32■□□□□ 0.52
CLK3P2-201ENST00000427566 UBA5Q9GZZ9 404 aa18.32■□□□□ 0.52
CLK3P2-201ENST00000427566 PAK6Q9NQU5 681 aaPredicted RBP18.32■□□□□ 0.52
CLK3P2-201ENST00000427566 MCM3APO60318 1980 aa18.31■□□□□ 0.52
CLK3P2-201ENST00000427566 PLA2G6O60733 806 aa18.31■□□□□ 0.52
CLK3P2-201ENST00000427566 HOXC6P09630 235 aa18.31■□□□□ 0.52
CLK3P2-201ENST00000427566 TAL1P17542 331 aaPredicted RBP18.31■□□□□ 0.52
CLK3P2-201ENST00000427566 CASTP20810 708 aaKnown RBP18.31■□□□□ 0.52
CLK3P2-201ENST00000427566 TROAPQ12815 778 aa18.31■□□□□ 0.52
CLK3P2-201ENST00000427566 BTNL9Q6UXG8 535 aa18.31■□□□□ 0.52
CLK3P2-201ENST00000427566 AGBL1Q96MI9 1066 aa18.31■□□□□ 0.52
CLK3P2-201ENST00000427566 MTA3Q9BTC8 594 aa18.31■□□□□ 0.52
CLK3P2-201ENST00000427566 MAD2L2Q9UI95 211 aa18.31■□□□□ 0.52
CLK3P2-201ENST00000427566 ATP2A1O14983 1001 aa18.3■□□□□ 0.52
CLK3P2-201ENST00000427566 ALAS1P13196 640 aa18.3■□□□□ 0.52
CLK3P2-201ENST00000427566 OAZ1P54368 228 aa18.3■□□□□ 0.52
CLK3P2-201ENST00000427566 MAP3K21Q5TCX8 1036 aa18.3■□□□□ 0.52
CLK3P2-201ENST00000427566 SYDE2Q5VT97 1194 aa18.3■□□□□ 0.52
CLK3P2-201ENST00000427566 BLOC1S2Q6QNY1 142 aa18.3■□□□□ 0.52
CLK3P2-201ENST00000427566 ZNF654Q8IZM8 581 aa18.3■□□□□ 0.52
CLK3P2-201ENST00000427566 ANKRD35Q8N283 1001 aa18.3■□□□□ 0.52
CLK3P2-201ENST00000427566 ZNF536O15090 1300 aa18.29■□□□□ 0.52
CLK3P2-201ENST00000427566 PARP1P09874 1014 aaKnown RBP18.29■□□□□ 0.52
CLK3P2-201ENST00000427566 RXRAP19793 462 aa18.29■□□□□ 0.52
CLK3P2-201ENST00000427566 RPS6KB1P23443 525 aa18.29■□□□□ 0.52
CLK3P2-201ENST00000427566 LIFRP42702 1097 aa18.29■□□□□ 0.52
CLK3P2-201ENST00000427566 NFXL1Q6ZNB6 911 aa18.29■□□□□ 0.52
CLK3P2-201ENST00000427566 MAML3Q96JK9 1138 aa18.29■□□□□ 0.52
CLK3P2-201ENST00000427566 UPF3BQ9BZI7 483 aaKnown RBP18.29■□□□□ 0.52
CLK3P2-201ENST00000427566 BRPF3Q9ULD4 1205 aa18.29■□□□□ 0.52
CLK3P2-201ENST00000427566 WDR19Q8NEZ3 1342 aa18.28■□□□□ 0.52
CLK3P2-201ENST00000427566 FARP2O94887 1054 aaPredicted RBP18.28■□□□□ 0.52
CLK3P2-201ENST00000427566 HMGB1P09429 215 aaKnown RBP18.28■□□□□ 0.52
CLK3P2-201ENST00000427566 SLC35G1Q2M3R5 365 aa18.28■□□□□ 0.52
CLK3P2-201ENST00000427566 GPATCH4Q5T3I0 446 aaKnown RBP18.28■□□□□ 0.52
CLK3P2-201ENST00000427566 OLFML2BQ68BL8 750 aa18.28■□□□□ 0.52
CLK3P2-201ENST00000427566 Q6ZUG5 572 aa18.28■□□□□ 0.52
CLK3P2-201ENST00000427566 CHST13Q8NET6 341 aa18.28■□□□□ 0.52
CLK3P2-201ENST00000427566 NUP133Q8WUM0 1156 aa18.28■□□□□ 0.52
CLK3P2-201ENST00000427566 ZSWIM6Q9HCJ5 1215 aa18.28■□□□□ 0.52
CLK3P2-201ENST00000427566 RNF146Q9NTX7 359 aa18.28■□□□□ 0.52
CLK3P2-201ENST00000427566 FBXO40Q9UH90 709 aa18.28■□□□□ 0.52
CLK3P2-201ENST00000427566 CCPG1Q9ULG6 757 aa18.28■□□□□ 0.52
CLK3P2-201ENST00000427566 TNRC18O15417 2968 aaPredicted RBP18.28■□□□□ 0.52
CLK3P2-201ENST00000427566 PALM3A6NDB9 673 aaPredicted RBP18.27■□□□□ 0.52
CLK3P2-201ENST00000427566 CCDC69A6NI79 296 aa18.27■□□□□ 0.52
CLK3P2-201ENST00000427566 DHX16O60231 1041 aaKnown RBP18.27■□□□□ 0.52
CLK3P2-201ENST00000427566 PSMA5P28066 241 aa18.27■□□□□ 0.52
CLK3P2-201ENST00000427566 GRM4Q14833 912 aa18.27■□□□□ 0.52
CLK3P2-201ENST00000427566 ASPRV1Q53RT3 343 aa18.27■□□□□ 0.52
CLK3P2-201ENST00000427566 PRAMEF19Q5SWL8 479 aa18.27■□□□□ 0.52
CLK3P2-201ENST00000427566 CATIPQ7Z7H3 387 aa18.27■□□□□ 0.52
CLK3P2-201ENST00000427566 SGMS1Q86VZ5 419 aa18.27■□□□□ 0.52
CLK3P2-201ENST00000427566 CCDC144CPQ8IYA2 1237 aa18.27■□□□□ 0.52
CLK3P2-201ENST00000427566 TRERF1Q96PN7 1200 aa18.27■□□□□ 0.52
CLK3P2-201ENST00000427566 ACAD9Q9H845 621 aa18.27■□□□□ 0.52
CLK3P2-201ENST00000427566 ZNF792Q3KQV3 632 aa18.26■□□□□ 0.51
CLK3P2-201ENST00000427566 RUFY3Q7L099 469 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms