RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 CTNNA3Q9UI47 895 aa22.56■■□□□ 1.2
COL9A2-204ENST00000427563 CTDP1Q9Y5B0 961 aaPredicted RBP22.56■■□□□ 1.2
COL9A2-204ENST00000427563 CYP21A2P08686 494 aa22.55■■□□□ 1.2
COL9A2-204ENST00000427563 ZNF543Q08ER8 600 aa22.55■■□□□ 1.2
COL9A2-204ENST00000427563 DGKHQ86XP1 1220 aa22.55■■□□□ 1.2
COL9A2-204ENST00000427563 CHST13Q8NET6 341 aa22.55■■□□□ 1.2
COL9A2-204ENST00000427563 ANKS1AQ92625 1134 aa22.55■■□□□ 1.2
COL9A2-204ENST00000427563 RANBP17Q9H2T7 1088 aaKnown RBP22.55■■□□□ 1.2
COL9A2-204ENST00000427563 GPCPD1Q9NPB8 672 aa22.55■■□□□ 1.2
COL9A2-204ENST00000427563 DNAH12Q6ZR08 3092 aa22.54■■□□□ 1.2
COL9A2-204ENST00000427563 SEPT4O43236 478 aa22.54■■□□□ 1.2
COL9A2-204ENST00000427563 SNAI1O95863 264 aaPredicted RBP22.54■■□□□ 1.2
COL9A2-204ENST00000427563 ZNF865P0CJ78 1059 aaPredicted RBP22.54■■□□□ 1.2
COL9A2-204ENST00000427563 MUM1L1Q5H9M0 696 aa22.54■■□□□ 1.2
COL9A2-204ENST00000427563 SYDE2Q5VT97 1194 aa22.54■■□□□ 1.2
COL9A2-204ENST00000427563 CYB5R4Q7L1T6 521 aa22.54■■□□□ 1.2
COL9A2-204ENST00000427563 CENPQQ7L2Z9 268 aaPredicted RBP22.54■■□□□ 1.2
COL9A2-204ENST00000427563 ENAHQ8N8S7 591 aaPredicted RBP22.54■■□□□ 1.2
COL9A2-204ENST00000427563 RNF146Q9NTX7 359 aa22.54■■□□□ 1.2
COL9A2-204ENST00000427563 LRRC37A2A6NM11 1700 aa22.54■■□□□ 1.2
COL9A2-204ENST00000427563 RUFY2Q8WXA3 655 aa22.53■■□□□ 1.2
COL9A2-204ENST00000427563 DDX11Q96FC9 970 aa22.53■■□□□ 1.2
COL9A2-204ENST00000427563 A1CFQ9NQ94 594 aaKnown RBP22.53■■□□□ 1.2
COL9A2-204ENST00000427563 FBXO40Q9UH90 709 aa22.53■■□□□ 1.2
COL9A2-204ENST00000427563 ASTN1O14525 1302 aa22.53■■□□□ 1.2
COL9A2-204ENST00000427563 TNKSO95271 1327 aa22.53■■□□□ 1.2
COL9A2-204ENST00000427563 MSCO60682 206 aa22.52■■□□□ 1.2
COL9A2-204ENST00000427563 ALAS1P13196 640 aa22.52■■□□□ 1.2
COL9A2-204ENST00000427563 NT5C2P49902 561 aa22.52■■□□□ 1.2
COL9A2-204ENST00000427563 CNTN2Q02246 1040 aa22.52■■□□□ 1.2
COL9A2-204ENST00000427563 MAMDC4Q6UXC1 1216 aa22.52■■□□□ 1.2
COL9A2-204ENST00000427563 STOX1Q6ZVD7 989 aa22.52■■□□□ 1.2
COL9A2-204ENST00000427563 ANKRD35Q8N283 1001 aa22.52■■□□□ 1.2
COL9A2-204ENST00000427563 TRERF1Q96PN7 1200 aa22.52■■□□□ 1.2
COL9A2-204ENST00000427563 ZSCAN10Q96SZ4 725 aaPredicted RBP22.52■■□□□ 1.2
COL9A2-204ENST00000427563 CPVLQ9H3G5 476 aa22.52■■□□□ 1.2
COL9A2-204ENST00000427563 ACAD9Q9H845 621 aa22.52■■□□□ 1.2
COL9A2-204ENST00000427563 PCDH10Q9P2E7 1040 aa22.52■■□□□ 1.2
COL9A2-204ENST00000427563 GOLGA8HP0CJ92 632 aa22.51■■□□□ 1.19
COL9A2-204ENST00000427563 SEC23AQ15436 765 aa22.51■■□□□ 1.19
COL9A2-204ENST00000427563 ZNF467Q7Z7K2 595 aaPredicted RBP22.51■■□□□ 1.19
COL9A2-204ENST00000427563 FAM133AQ8N9E0 248 aa22.51■■□□□ 1.19
COL9A2-204ENST00000427563 PNMA1Q8ND90 353 aa22.51■■□□□ 1.19
COL9A2-204ENST00000427563 LENG1Q96BZ8 264 aaPredicted RBP22.51■■□□□ 1.19
COL9A2-204ENST00000427563 KRT23Q9C075 422 aa22.51■■□□□ 1.19
COL9A2-204ENST00000427563 NRBP1Q9UHY1 535 aa22.51■■□□□ 1.19
COL9A2-204ENST00000427563 COLQQ9Y215 455 aaPredicted RBP22.51■■□□□ 1.19
COL9A2-204ENST00000427563 RANBP2P49792 3224 aaKnown RBP22.5■■□□□ 1.19
COL9A2-204ENST00000427563 SOWAHBA6NEL2 793 aa22.5■■□□□ 1.19
COL9A2-204ENST00000427563 EVI5O60447 810 aa22.5■■□□□ 1.19
COL9A2-204ENST00000427563 ICAM1P05362 532 aa22.5■■□□□ 1.19
COL9A2-204ENST00000427563 LRRC26Q2I0M4 334 aa22.5■■□□□ 1.19
COL9A2-204ENST00000427563 TKFCQ3LXA3 575 aa22.5■■□□□ 1.19
COL9A2-204ENST00000427563 GJC2Q5T442 439 aaPredicted RBP22.5■■□□□ 1.19
COL9A2-204ENST00000427563 IQCA1Q86XH1 822 aa22.5■■□□□ 1.19
COL9A2-204ENST00000427563 MAP4K1Q92918 833 aa22.5■■□□□ 1.19
COL9A2-204ENST00000427563 KATNBL1Q9H079 304 aa22.5■■□□□ 1.19
COL9A2-204ENST00000427563 CCPG1Q9ULG6 757 aa22.5■■□□□ 1.19
COL9A2-204ENST00000427563 DDX49Q9Y6V7 483 aaKnown RBP22.5■■□□□ 1.19
COL9A2-204ENST00000427563 SYNGAP1Q96PV0 1343 aa22.5■■□□□ 1.19
COL9A2-204ENST00000427563 ADCY6O43306 1168 aa22.49■■□□□ 1.19
COL9A2-204ENST00000427563 MSL3Q8N5Y2 521 aaKnown RBP22.49■■□□□ 1.19
COL9A2-204ENST00000427563 PURBQ96QR8 312 aaKnown RBP22.49■■□□□ 1.19
COL9A2-204ENST00000427563 UBA5Q9GZZ9 404 aa22.49■■□□□ 1.19
COL9A2-204ENST00000427563 LSG1Q9H089 658 aaKnown RBP22.49■■□□□ 1.19
COL9A2-204ENST00000427563 PRO3102Q9H379 93 aa22.49■■□□□ 1.19
COL9A2-204ENST00000427563 CNNM2Q9H8M5 875 aa22.49■■□□□ 1.19
COL9A2-204ENST00000427563 U3KPZ7 1027 aaPredicted RBP22.49■■□□□ 1.19
COL9A2-204ENST00000427563 DNM1LO00429 736 aa22.48■■□□□ 1.19
COL9A2-204ENST00000427563 COL9A3Q14050 684 aaPredicted RBP22.48■■□□□ 1.19
COL9A2-204ENST00000427563 CCDC178Q5BJE1 867 aa22.48■■□□□ 1.19
COL9A2-204ENST00000427563 C7orf61Q8IZ16 206 aa22.48■■□□□ 1.19
COL9A2-204ENST00000427563 KAT14Q9H8E8 782 aa22.48■■□□□ 1.19
COL9A2-204ENST00000427563 SENP2Q9HC62 589 aa22.48■■□□□ 1.19
COL9A2-204ENST00000427563 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.48■■□□□ 1.19
COL9A2-204ENST00000427563 CYP39A1Q9NYL5 469 aa22.48■■□□□ 1.19
COL9A2-204ENST00000427563 RBM8AQ9Y5S9 174 aaKnown RBP22.48■■□□□ 1.19
COL9A2-204ENST00000427563 E7EWF7 191 aa22.47■■□□□ 1.19
COL9A2-204ENST00000427563 NFIBO00712 420 aa22.47■■□□□ 1.19
COL9A2-204ENST00000427563 LRRC41Q15345 812 aa22.47■■□□□ 1.19
COL9A2-204ENST00000427563 HABP4Q5JVS0 413 aaKnown RBP22.47■■□□□ 1.19
COL9A2-204ENST00000427563 CHRDL2Q6WN34 429 aa22.47■■□□□ 1.19
COL9A2-204ENST00000427563 CLEC4DQ8WXI8 215 aa22.47■■□□□ 1.19
COL9A2-204ENST00000427563 ESYT1Q9BSJ8 1104 aa22.47■■□□□ 1.19
COL9A2-204ENST00000427563 SENP6Q9GZR1 1112 aaPredicted RBP22.47■■□□□ 1.19
COL9A2-204ENST00000427563 NR2E3Q9Y5X4 410 aa22.47■■□□□ 1.19
COL9A2-204ENST00000427563 MYH6P13533 1939 aa22.47■■□□□ 1.19
COL9A2-204ENST00000427563 POTEB2H3BUK9 544 aa22.46■■□□□ 1.19
COL9A2-204ENST00000427563 BMP2KLQ5H9B9 411 aa22.46■■□□□ 1.19
COL9A2-204ENST00000427563 GPATCH4Q5T3I0 446 aaKnown RBP22.46■■□□□ 1.19
COL9A2-204ENST00000427563 ARMCX2Q7L311 632 aa22.46■■□□□ 1.19
COL9A2-204ENST00000427563 PGK1P00558 417 aa22.45■■□□□ 1.18
COL9A2-204ENST00000427563 NEFLP07196 543 aa22.45■■□□□ 1.18
COL9A2-204ENST00000427563 AKR1A1P14550 325 aa22.45■■□□□ 1.18
COL9A2-204ENST00000427563 ANTXR2P58335 489 aa22.45■■□□□ 1.18
COL9A2-204ENST00000427563 IRX5P78411 483 aaPredicted RBP22.45■■□□□ 1.18
COL9A2-204ENST00000427563 CCDC144CPQ8IYA2 1237 aa22.45■■□□□ 1.18
COL9A2-204ENST00000427563 UBAC1Q9BSL1 405 aa22.45■■□□□ 1.18
COL9A2-204ENST00000427563 ZMYND8Q9ULU4 1186 aaPredicted RBP22.45■■□□□ 1.18
COL9A2-204ENST00000427563 CNPY2Q9Y2B0 182 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms