RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 CT47A1Q5JQC4 288 aaPredicted RBP15.86■□□□□ 0.13
APOBEC3D-202ENST00000427494 KLHL10Q6JEL2 608 aa15.86■□□□□ 0.13
APOBEC3D-202ENST00000427494 REXO1Q8N1G1 1221 aaKnown RBP15.86■□□□□ 0.13
APOBEC3D-202ENST00000427494 C16orf45Q96MC5 204 aaPredicted RBP15.86■□□□□ 0.13
APOBEC3D-202ENST00000427494 MED15Q96RN5 788 aa15.86■□□□□ 0.13
APOBEC3D-202ENST00000427494 DHX36Q9H2U1 1008 aaKnown RBP15.86■□□□□ 0.13
APOBEC3D-202ENST00000427494 BIN2Q9UBW5 565 aaPredicted RBP15.86■□□□□ 0.13
APOBEC3D-202ENST00000427494 SYNRGQ9UMZ2 1314 aa15.85■□□□□ 0.13
APOBEC3D-202ENST00000427494 TMEM232C9JQI7 657 aa15.85■□□□□ 0.13
APOBEC3D-202ENST00000427494 CD44P16070 742 aaKnown RBP15.85■□□□□ 0.13
APOBEC3D-202ENST00000427494 PRPHP41219 470 aa15.85■□□□□ 0.13
APOBEC3D-202ENST00000427494 CCDC96Q2M329 555 aa15.85■□□□□ 0.13
APOBEC3D-202ENST00000427494 JAKMIP3Q5VZ66 844 aa15.85■□□□□ 0.13
APOBEC3D-202ENST00000427494 NEK8Q86SG6 692 aa15.85■□□□□ 0.13
APOBEC3D-202ENST00000427494 SMYD4Q8IYR2 804 aaPredicted RBP15.85■□□□□ 0.13
APOBEC3D-202ENST00000427494 RASSF8Q8NHQ8 419 aa15.85■□□□□ 0.13
APOBEC3D-202ENST00000427494 C7orf43Q8WVR3 580 aa15.85■□□□□ 0.13
APOBEC3D-202ENST00000427494 COA7Q96BR5 231 aa15.85■□□□□ 0.13
APOBEC3D-202ENST00000427494 CCDC17Q96LX7 622 aa15.85■□□□□ 0.13
APOBEC3D-202ENST00000427494 CAMKK2Q96RR4 588 aa15.85■□□□□ 0.13
APOBEC3D-202ENST00000427494 DNAJC18Q9H819 358 aa15.85■□□□□ 0.13
APOBEC3D-202ENST00000427494 DISC1Q9NRI5 854 aa15.85■□□□□ 0.13
APOBEC3D-202ENST00000427494 FAM198AQ9UFP1 575 aa15.85■□□□□ 0.13
APOBEC3D-202ENST00000427494 DDTLA6NHG4 134 aaPredicted RBP15.84■□□□□ 0.13
APOBEC3D-202ENST00000427494 FAM196BA6NMK8 535 aa15.84■□□□□ 0.13
APOBEC3D-202ENST00000427494 PP2D1A8MPX8 630 aa15.84■□□□□ 0.13
APOBEC3D-202ENST00000427494 OR52Z1P0C646 297 aa15.84■□□□□ 0.13
APOBEC3D-202ENST00000427494 ADCY7P51828 1080 aa15.84■□□□□ 0.13
APOBEC3D-202ENST00000427494 CUL4BQ13620 913 aa15.84■□□□□ 0.13
APOBEC3D-202ENST00000427494 PPP4R3BQ5MIZ7 849 aa15.84■□□□□ 0.13
APOBEC3D-202ENST00000427494 VSTM4Q8IW00 320 aa15.84■□□□□ 0.13
APOBEC3D-202ENST00000427494 ZSCAN29Q8IWY8 852 aaPredicted RBP15.84■□□□□ 0.13
APOBEC3D-202ENST00000427494 TBCKQ8TEA7 893 aa15.84■□□□□ 0.13
APOBEC3D-202ENST00000427494 MTRQ99707 1265 aa15.84■□□□□ 0.13
APOBEC3D-202ENST00000427494 IDI2Q9BXS1 227 aa15.84■□□□□ 0.13
APOBEC3D-202ENST00000427494 TRIM34Q9BYJ4 488 aa15.84■□□□□ 0.13
APOBEC3D-202ENST00000427494 SAMSN1Q9NSI8 373 aaKnown RBP15.84■□□□□ 0.13
APOBEC3D-202ENST00000427494 TMEM260Q9NX78 707 aa15.84■□□□□ 0.13
APOBEC3D-202ENST00000427494 SERPINA10Q9UK55 444 aa15.84■□□□□ 0.13
APOBEC3D-202ENST00000427494 UBA7P41226 1012 aa15.84■□□□□ 0.13
APOBEC3D-202ENST00000427494 RRAGBQ5VZM2 374 aa15.84■□□□□ 0.13
APOBEC3D-202ENST00000427494 ADGRF4Q8IZF3 695 aa15.84■□□□□ 0.13
APOBEC3D-202ENST00000427494 MYRIPQ8NFW9 859 aa15.84■□□□□ 0.13
APOBEC3D-202ENST00000427494 JMJD4Q9H9V9 463 aa15.84■□□□□ 0.13
APOBEC3D-202ENST00000427494 INTS13Q9NVM9 706 aa15.84■□□□□ 0.13
APOBEC3D-202ENST00000427494 PNMA6FA0A0J9YX94 578 aa15.83■□□□□ 0.12
APOBEC3D-202ENST00000427494 PPP1R3GB7ZBB8 358 aa15.83■□□□□ 0.12
APOBEC3D-202ENST00000427494 NRDCO43847 1150 aa15.83■□□□□ 0.12
APOBEC3D-202ENST00000427494 STX17P56962 302 aa15.83■□□□□ 0.12
APOBEC3D-202ENST00000427494 CERKLQ49MI3 558 aaPredicted RBP15.83■□□□□ 0.12
APOBEC3D-202ENST00000427494 GPATCH4Q5T3I0 446 aaKnown RBP15.83■□□□□ 0.12
APOBEC3D-202ENST00000427494 SPATA1Q5VX52 437 aa15.83■□□□□ 0.12
APOBEC3D-202ENST00000427494 TTBK2Q6IQ55 1244 aa15.83■□□□□ 0.12
APOBEC3D-202ENST00000427494 SUPT20HQ8NEM7 779 aa15.83■□□□□ 0.12
APOBEC3D-202ENST00000427494 CCSER1Q9C0I3 900 aa15.83■□□□□ 0.12
APOBEC3D-202ENST00000427494 PI4KBQ9UBF8 816 aa15.83■□□□□ 0.12
APOBEC3D-202ENST00000427494 USP27XA6NNY8 438 aa15.82■□□□□ 0.12
APOBEC3D-202ENST00000427494 PPIP5K2O43314 1243 aa15.82■□□□□ 0.12
APOBEC3D-202ENST00000427494 PTPN21Q16825 1174 aa15.82■□□□□ 0.12
APOBEC3D-202ENST00000427494 CC2D2BQ6DHV5 1058 aa15.82■□□□□ 0.12
APOBEC3D-202ENST00000427494 KCTD1Q719H9 257 aa15.82■□□□□ 0.12
APOBEC3D-202ENST00000427494 SH3BP5LQ7L8J4 393 aa15.82■□□□□ 0.12
APOBEC3D-202ENST00000427494 RMND1Q9NWS8 449 aa15.82■□□□□ 0.12
APOBEC3D-202ENST00000427494 CTNND2Q9UQB3 1225 aa15.82■□□□□ 0.12
APOBEC3D-202ENST00000427494 C21orf2O43822 256 aa15.82■□□□□ 0.12
APOBEC3D-202ENST00000427494 RPN1P04843 607 aaKnown RBP15.82■□□□□ 0.12
APOBEC3D-202ENST00000427494 TNNT1P13805 278 aa15.82■□□□□ 0.12
APOBEC3D-202ENST00000427494 SLC16A2P36021 539 aa15.82■□□□□ 0.12
APOBEC3D-202ENST00000427494 SHROOM1Q2M3G4 852 aaPredicted RBP15.82■□□□□ 0.12
APOBEC3D-202ENST00000427494 PPP1R18Q6NYC8 613 aa15.82■□□□□ 0.12
APOBEC3D-202ENST00000427494 RAD21O60216 631 aa15.81■□□□□ 0.12
APOBEC3D-202ENST00000427494 ORC2Q13416 577 aaPredicted RBP15.81■□□□□ 0.12
APOBEC3D-202ENST00000427494 NAALADL2Q58DX5 795 aa15.81■□□□□ 0.12
APOBEC3D-202ENST00000427494 POTEAQ6S8J7 498 aa15.81■□□□□ 0.12
APOBEC3D-202ENST00000427494 CCAR2Q8N163 923 aaKnown RBP15.81■□□□□ 0.12
APOBEC3D-202ENST00000427494 AK8Q96MA6 479 aa15.81■□□□□ 0.12
APOBEC3D-202ENST00000427494 PLIN2Q99541 437 aa15.81■□□□□ 0.12
APOBEC3D-202ENST00000427494 TDRD3Q9H7E2 651 aaKnown RBP15.81■□□□□ 0.12
APOBEC3D-202ENST00000427494 RGS17Q9UGC6 210 aaPredicted RBP15.81■□□□□ 0.12
APOBEC3D-202ENST00000427494 YDJCA8MPS7 323 aa15.8■□□□□ 0.12
APOBEC3D-202ENST00000427494 USP17L10C9JJH3 530 aa15.8■□□□□ 0.12
APOBEC3D-202ENST00000427494 PPP1R11O60927 126 aaPredicted RBP15.8■□□□□ 0.12
APOBEC3D-202ENST00000427494 EEF2P13639 858 aaKnown RBP15.8■□□□□ 0.12
APOBEC3D-202ENST00000427494 PSME4Q14997 1843 aa15.8■□□□□ 0.12
APOBEC3D-202ENST00000427494 CABP7Q86V35 215 aa15.8■□□□□ 0.12
APOBEC3D-202ENST00000427494 POTEDQ86YR6 584 aa15.8■□□□□ 0.12
APOBEC3D-202ENST00000427494 TRMT1Q9NXH9 659 aaKnown RBP15.8■□□□□ 0.12
APOBEC3D-202ENST00000427494 DYNC1I1O14576 645 aa15.8■□□□□ 0.12
APOBEC3D-202ENST00000427494 ZNF658Q5TYW1 1059 aaPredicted RBP15.8■□□□□ 0.12
APOBEC3D-202ENST00000427494 KANSL2Q9H9L4 492 aa15.8■□□□□ 0.12
APOBEC3D-202ENST00000427494 RIC8AQ9NPQ8 531 aa15.8■□□□□ 0.12
APOBEC3D-202ENST00000427494 KCND1Q9NSA2 647 aa15.8■□□□□ 0.12
APOBEC3D-202ENST00000427494 NYAP2Q9P242 653 aa15.8■□□□□ 0.12
APOBEC3D-202ENST00000427494 ARFGEF1Q9Y6D6 1849 aa15.79■□□□□ 0.12
APOBEC3D-202ENST00000427494 ZBTB5O15062 677 aa15.79■□□□□ 0.12
APOBEC3D-202ENST00000427494 GDF11O95390 407 aa15.79■□□□□ 0.12
APOBEC3D-202ENST00000427494 TECP42680 631 aa15.79■□□□□ 0.12
APOBEC3D-202ENST00000427494 TATDN1Q6P1N9 297 aa15.79■□□□□ 0.12
APOBEC3D-202ENST00000427494 CCDC112Q8NEF3 446 aa15.79■□□□□ 0.12
APOBEC3D-202ENST00000427494 DCAF4Q8WV16 495 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms