RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 ARMCX2Q7L311 632 aa17.55■□□□□ 0.4
PDAP1-202ENST00000426447 PANK1Q8TE04 598 aa17.55■□□□□ 0.4
PDAP1-202ENST00000426447 HERVK_113Q902F9 699 aa17.55■□□□□ 0.4
PDAP1-202ENST00000426447 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.55■□□□□ 0.4
PDAP1-202ENST00000426447 UPF3AQ9H1J1 476 aaKnown RBP17.55■□□□□ 0.4
PDAP1-202ENST00000426447 NYAP2Q9P242 653 aa17.55■□□□□ 0.4
PDAP1-202ENST00000426447 ARPP21Q9UBL0 812 aaPredicted RBP17.55■□□□□ 0.4
PDAP1-202ENST00000426447 COL11A1P12107 1806 aaPredicted RBP17.54■□□□□ 0.4
PDAP1-202ENST00000426447 MINDY4BA8MYZ0 360 aa17.54■□□□□ 0.4
PDAP1-202ENST00000426447 ADCY6O43306 1168 aa17.54■□□□□ 0.4
PDAP1-202ENST00000426447 RAB11FIP3O75154 756 aa17.54■□□□□ 0.4
PDAP1-202ENST00000426447 CHGBP05060 677 aa17.54■□□□□ 0.4
PDAP1-202ENST00000426447 BEX3Q00994 111 aa17.54■□□□□ 0.4
PDAP1-202ENST00000426447 OTOP2Q7RTS6 562 aa17.54■□□□□ 0.4
PDAP1-202ENST00000426447 RPAP2Q8IXW5 612 aaPredicted RBP17.54■□□□□ 0.4
PDAP1-202ENST00000426447 CCDC144CPQ8IYA2 1237 aa17.54■□□□□ 0.4
PDAP1-202ENST00000426447 CHST13Q8NET6 341 aa17.54■□□□□ 0.4
PDAP1-202ENST00000426447 HAUS7Q99871 368 aa17.54■□□□□ 0.4
PDAP1-202ENST00000426447 PUS7LQ9H0K6 701 aaKnown RBP17.54■□□□□ 0.4
PDAP1-202ENST00000426447 HIPK3Q9H422 1215 aa17.54■□□□□ 0.4
PDAP1-202ENST00000426447 PLXNA1Q9UIW2 1896 aa17.54■□□□□ 0.4
PDAP1-202ENST00000426447 CD4P01730 458 aa17.53■□□□□ 0.4
PDAP1-202ENST00000426447 TNFAIP2Q03169 654 aa17.53■□□□□ 0.4
PDAP1-202ENST00000426447 HOMER2Q9NSB8 354 aa17.53■□□□□ 0.4
PDAP1-202ENST00000426447 CXXC1Q9P0U4 656 aaPredicted RBP17.53■□□□□ 0.4
PDAP1-202ENST00000426447 FEM1BQ9UK73 627 aa17.53■□□□□ 0.4
PDAP1-202ENST00000426447 ISY1Q9ULR0 285 aaKnown RBP17.53■□□□□ 0.4
PDAP1-202ENST00000426447 ZBED9Q6R2W3 1325 aa17.52■□□□□ 0.4
PDAP1-202ENST00000426447 CABYRO75952 493 aa17.52■□□□□ 0.4
PDAP1-202ENST00000426447 RASA1P20936 1047 aa17.52■□□□□ 0.4
PDAP1-202ENST00000426447 CCL23P55773 120 aa17.52■□□□□ 0.4
PDAP1-202ENST00000426447 CXCL17Q6UXB2 119 aa17.52■□□□□ 0.4
PDAP1-202ENST00000426447 ZNF444Q8N0Y2 327 aaPredicted RBP17.52■□□□□ 0.4
PDAP1-202ENST00000426447 MICALL1Q8N3F8 863 aa17.52■□□□□ 0.4
PDAP1-202ENST00000426447 AP5M1Q9H0R1 490 aa17.52■□□□□ 0.4
PDAP1-202ENST00000426447 SLC38A10Q9HBR0 1119 aa17.52■□□□□ 0.4
PDAP1-202ENST00000426447 MYH8P13535 1937 aa17.52■□□□□ 0.4
PDAP1-202ENST00000426447 PARP14Q460N5 1801 aa17.51■□□□□ 0.39
PDAP1-202ENST00000426447 ZEB2O60315 1214 aa17.51■□□□□ 0.39
PDAP1-202ENST00000426447 CNTN2Q02246 1040 aa17.51■□□□□ 0.39
PDAP1-202ENST00000426447 ITGA7Q13683 1181 aa17.51■□□□□ 0.39
PDAP1-202ENST00000426447 SBK1Q52WX2 424 aa17.51■□□□□ 0.39
PDAP1-202ENST00000426447 RPUSD2Q8IZ73 545 aaKnown RBP17.51■□□□□ 0.39
PDAP1-202ENST00000426447 TTC28Q96AY4 2481 aa17.51■□□□□ 0.39
PDAP1-202ENST00000426447 FAM122AQ96E09 287 aa17.51■□□□□ 0.39
PDAP1-202ENST00000426447 ZNF287Q9HBT7 754 aa17.51■□□□□ 0.39
PDAP1-202ENST00000426447 YBX2Q9Y2T7 364 aaKnown RBP17.51■□□□□ 0.39
PDAP1-202ENST00000426447 SLC4A7Q9Y6M7 1214 aa17.51■□□□□ 0.39
PDAP1-202ENST00000426447 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.5■□□□□ 0.39
PDAP1-202ENST00000426447 ZBBXA8MT70 800 aa17.5■□□□□ 0.39
PDAP1-202ENST00000426447 CTAGE5O15320 804 aa17.5■□□□□ 0.39
PDAP1-202ENST00000426447 MS4A1P11836 297 aa17.5■□□□□ 0.39
PDAP1-202ENST00000426447 RABGGTBP53611 331 aa17.5■□□□□ 0.39
PDAP1-202ENST00000426447 OAZ1P54368 228 aa17.5■□□□□ 0.39
PDAP1-202ENST00000426447 SKIV2LQ15477 1246 aaKnown RBP17.5■□□□□ 0.39
PDAP1-202ENST00000426447 PPP2R2DQ66LE6 453 aa17.5■□□□□ 0.39
PDAP1-202ENST00000426447 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.5■□□□□ 0.39
PDAP1-202ENST00000426447 FGD4Q96M96 766 aa17.5■□□□□ 0.39
PDAP1-202ENST00000426447 STRBPQ96SI9 672 aaKnown RBP17.5■□□□□ 0.39
PDAP1-202ENST00000426447 BAZ2AQ9UIF9 1905 aaKnown RBP17.5■□□□□ 0.39
PDAP1-202ENST00000426447 UMODL1Q5DID0 1318 aa17.49■□□□□ 0.39
PDAP1-202ENST00000426447 ASB14A6NK59 587 aa17.49■□□□□ 0.39
PDAP1-202ENST00000426447 DYNC1LI2O43237 492 aaPredicted RBP17.49■□□□□ 0.39
PDAP1-202ENST00000426447 IKQ13123 557 aaPredicted RBP17.49■□□□□ 0.39
PDAP1-202ENST00000426447 FSCN1Q16658 493 aaKnown RBP17.49■□□□□ 0.39
PDAP1-202ENST00000426447 SLC43A3Q8NBI5 491 aa17.49■□□□□ 0.39
PDAP1-202ENST00000426447 MKL1Q969V6 931 aa17.49■□□□□ 0.39
PDAP1-202ENST00000426447 SEZ6LQ9BYH1 1024 aa17.49■□□□□ 0.39
PDAP1-202ENST00000426447 TRPV6Q9H1D0 765 aa17.49■□□□□ 0.39
PDAP1-202ENST00000426447 ACAD9Q9H845 621 aa17.49■□□□□ 0.39
PDAP1-202ENST00000426447 COG6Q9Y2V7 657 aa17.49■□□□□ 0.39
PDAP1-202ENST00000426447 GSG1L2A8MUP6 293 aa17.48■□□□□ 0.39
PDAP1-202ENST00000426447 PRDM1O75626 825 aa17.48■□□□□ 0.39
PDAP1-202ENST00000426447 TTLL1O95922 423 aa17.48■□□□□ 0.39
PDAP1-202ENST00000426447 APPP05067 770 aa17.48■□□□□ 0.39
PDAP1-202ENST00000426447 FDX1P10109 184 aa17.48■□□□□ 0.39
PDAP1-202ENST00000426447 BMP3P12645 472 aa17.48■□□□□ 0.39
PDAP1-202ENST00000426447 PLA2G5P39877 138 aa17.48■□□□□ 0.39
PDAP1-202ENST00000426447 NKX3-2P78367 333 aa17.48■□□□□ 0.39
PDAP1-202ENST00000426447 HNRNPUQ00839 825 aaKnown RBP eCLIP17.48■□□□□ 0.39
PDAP1-202ENST00000426447 AAK1Q2M2I8 961 aa17.48■□□□□ 0.39
PDAP1-202ENST00000426447 SLFN13Q68D06 897 aa17.48■□□□□ 0.39
PDAP1-202ENST00000426447 GIMAP6Q6P9H5 292 aa17.48■□□□□ 0.39
PDAP1-202ENST00000426447 TLK2Q86UE8 772 aa17.48■□□□□ 0.39
PDAP1-202ENST00000426447 SIRT2Q8IXJ6 389 aa17.48■□□□□ 0.39
PDAP1-202ENST00000426447 CEP95Q96GE4 821 aa17.48■□□□□ 0.39
PDAP1-202ENST00000426447 KATNBL1Q9H079 304 aa17.48■□□□□ 0.39
PDAP1-202ENST00000426447 TMEM232C9JQI7 657 aa17.47■□□□□ 0.39
PDAP1-202ENST00000426447 MYOGP15173 224 aa17.47■□□□□ 0.39
PDAP1-202ENST00000426447 TDO2P48775 406 aa17.47■□□□□ 0.39
PDAP1-202ENST00000426447 LRRC47Q8N1G4 583 aaKnown RBP17.47■□□□□ 0.39
PDAP1-202ENST00000426447 FAM133AQ8N9E0 248 aa17.47■□□□□ 0.39
PDAP1-202ENST00000426447 NECAB3Q96P71 396 aaPredicted RBP17.47■□□□□ 0.39
PDAP1-202ENST00000426447 NOC4LQ9BVI4 516 aaKnown RBP17.47■□□□□ 0.39
PDAP1-202ENST00000426447 C1QTNF1Q9BXJ1 281 aa17.47■□□□□ 0.39
PDAP1-202ENST00000426447 MTMR4Q9NYA4 1195 aa17.47■□□□□ 0.39
PDAP1-202ENST00000426447 GNEQ9Y223 722 aaKnown RBP17.47■□□□□ 0.39
PDAP1-202ENST00000426447 PCDHA11Q9Y5I1 949 aa17.47■□□□□ 0.39
PDAP1-202ENST00000426447 ASTN1O14525 1302 aa17.47■□□□□ 0.39
PDAP1-202ENST00000426447 IGKV6D-41A0A0C4DH26 115 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms