RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 CNNM2Q9H8M5 875 aa16.01■□□□□ 0.15
SNX3-204ENST00000426155 ANO2Q9NQ90 1003 aa16.01■□□□□ 0.15
SNX3-204ENST00000426155 LRRC37A2A6NM11 1700 aa16■□□□□ 0.15
SNX3-204ENST00000426155 ATP2A1O14983 1001 aa16■□□□□ 0.15
SNX3-204ENST00000426155 IGHA2P01877 340 aa16■□□□□ 0.15
SNX3-204ENST00000426155 SNHG28P0DPA3 235 aa16■□□□□ 0.15
SNX3-204ENST00000426155 ZNF543Q08ER8 600 aa16■□□□□ 0.15
SNX3-204ENST00000426155 KCTD2Q14681 263 aa16■□□□□ 0.15
SNX3-204ENST00000426155 CHST3Q7LGC8 479 aa16■□□□□ 0.15
SNX3-204ENST00000426155 MAML3Q96JK9 1138 aa16■□□□□ 0.15
SNX3-204ENST00000426155 KAT14Q9H8E8 782 aa16■□□□□ 0.15
SNX3-204ENST00000426155 PLA2G6O60733 806 aa15.99■□□□□ 0.15
SNX3-204ENST00000426155 CDC45O75419 566 aa15.99■□□□□ 0.15
SNX3-204ENST00000426155 TFRCP02786 760 aaKnown RBP15.99■□□□□ 0.15
SNX3-204ENST00000426155 COPB2P35606 906 aa15.99■□□□□ 0.15
SNX3-204ENST00000426155 SEC23AQ15436 765 aa15.99■□□□□ 0.15
SNX3-204ENST00000426155 SYDE2Q5VT97 1194 aa15.99■□□□□ 0.15
SNX3-204ENST00000426155 MFSD14CQ5VZR4 134 aa15.99■□□□□ 0.15
SNX3-204ENST00000426155 KIAA1211Q6ZU35 1233 aa15.99■□□□□ 0.15
SNX3-204ENST00000426155 DIS3LQ8TF46 1054 aaKnown RBP15.99■□□□□ 0.15
SNX3-204ENST00000426155 UBAC1Q9BSL1 405 aa15.99■□□□□ 0.15
SNX3-204ENST00000426155 CRISPLD2Q9H0B8 497 aa15.99■□□□□ 0.15
SNX3-204ENST00000426155 SENP2Q9HC62 589 aa15.99■□□□□ 0.15
SNX3-204ENST00000426155 FARP2O94887 1054 aaPredicted RBP15.98■□□□□ 0.15
SNX3-204ENST00000426155 ALAS1P13196 640 aa15.98■□□□□ 0.15
SNX3-204ENST00000426155 OAZ1P54368 228 aa15.98■□□□□ 0.15
SNX3-204ENST00000426155 ANTXR2P58335 489 aa15.98■□□□□ 0.15
SNX3-204ENST00000426155 TRDNQ13061 729 aa15.98■□□□□ 0.15
SNX3-204ENST00000426155 ZNF792Q3KQV3 632 aa15.98■□□□□ 0.15
SNX3-204ENST00000426155 MUM1L1Q5H9M0 696 aa15.98■□□□□ 0.15
SNX3-204ENST00000426155 PRAMEF19Q5SWL8 479 aa15.98■□□□□ 0.15
SNX3-204ENST00000426155 OLFML2BQ68BL8 750 aa15.98■□□□□ 0.15
SNX3-204ENST00000426155 BTNL9Q6UXG8 535 aa15.98■□□□□ 0.15
SNX3-204ENST00000426155 UBE2Q1Q7Z7E8 422 aa15.98■□□□□ 0.15
SNX3-204ENST00000426155 RALYLQ86SE5 291 aaKnown RBP15.98■□□□□ 0.15
SNX3-204ENST00000426155 ANKS1AQ92625 1134 aa15.98■□□□□ 0.15
SNX3-204ENST00000426155 UBA5Q9GZZ9 404 aa15.98■□□□□ 0.15
SNX3-204ENST00000426155 RANBP17Q9H2T7 1088 aaKnown RBP15.98■□□□□ 0.15
SNX3-204ENST00000426155 RNF146Q9NTX7 359 aa15.98■□□□□ 0.15
SNX3-204ENST00000426155 SLC27A2O14975 620 aa15.97■□□□□ 0.15
SNX3-204ENST00000426155 CYBAP13498 195 aa15.97■□□□□ 0.15
SNX3-204ENST00000426155 CNGA1P29973 690 aa15.97■□□□□ 0.15
SNX3-204ENST00000426155 NT5C2P49902 561 aa15.97■□□□□ 0.15
SNX3-204ENST00000426155 IFIT1BQ5T764 474 aaKnown RBP15.97■□□□□ 0.15
SNX3-204ENST00000426155 LHX8Q68G74 356 aa15.97■□□□□ 0.15
SNX3-204ENST00000426155 NCOA7Q8NI08 942 aa15.97■□□□□ 0.15
SNX3-204ENST00000426155 FGD4Q96M96 766 aa15.97■□□□□ 0.15
SNX3-204ENST00000426155 PPP4R2Q9NY27 417 aa15.97■□□□□ 0.15
SNX3-204ENST00000426155 CCPG1Q9ULG6 757 aa15.97■□□□□ 0.15
SNX3-204ENST00000426155 DNAJC25-GNG10A0A024R161 153 aa15.96■□□□□ 0.15
SNX3-204ENST00000426155 FDX1P10109 184 aa15.96■□□□□ 0.15
SNX3-204ENST00000426155 MNX1P50219 401 aaPredicted RBP15.96■□□□□ 0.15
SNX3-204ENST00000426155 CCDC178Q5BJE1 867 aa15.96■□□□□ 0.15
SNX3-204ENST00000426155 ANO1Q5XXA6 986 aa15.96■□□□□ 0.15
SNX3-204ENST00000426155 CREB3L3Q68CJ9 461 aa15.96■□□□□ 0.15
SNX3-204ENST00000426155 MB21D2Q8IYB1 491 aaPredicted RBP15.96■□□□□ 0.15
SNX3-204ENST00000426155 ANKRD35Q8N283 1001 aa15.96■□□□□ 0.15
SNX3-204ENST00000426155 CHST13Q8NET6 341 aa15.96■□□□□ 0.15
SNX3-204ENST00000426155 DDX11Q96FC9 970 aa15.96■□□□□ 0.15
SNX3-204ENST00000426155 TRERF1Q96PN7 1200 aa15.96■□□□□ 0.15
SNX3-204ENST00000426155 ACAD9Q9H845 621 aa15.96■□□□□ 0.15
SNX3-204ENST00000426155 GPHNQ9NQX3 736 aaPredicted RBP15.96■□□□□ 0.15
SNX3-204ENST00000426155 SLC5A4Q9NY91 659 aa15.96■□□□□ 0.15
SNX3-204ENST00000426155 PITPNM1O00562 1244 aa15.95■□□□□ 0.14
SNX3-204ENST00000426155 IFIT3O14879 490 aaKnown RBP15.95■□□□□ 0.14
SNX3-204ENST00000426155 ICAM1P05362 532 aa15.95■□□□□ 0.14
SNX3-204ENST00000426155 CNTN2Q02246 1040 aa15.95■□□□□ 0.14
SNX3-204ENST00000426155 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.95■□□□□ 0.14
SNX3-204ENST00000426155 PAWRQ96IZ0 340 aaKnown RBP15.95■□□□□ 0.14
SNX3-204ENST00000426155 A1CFQ9NQ94 594 aaKnown RBP15.95■□□□□ 0.14
SNX3-204ENST00000426155 FBXO40Q9UH90 709 aa15.95■□□□□ 0.14
SNX3-204ENST00000426155 OGDHLQ9ULD0 1010 aa15.95■□□□□ 0.14
SNX3-204ENST00000426155 GTF3C3Q9Y5Q9 886 aa15.95■□□□□ 0.14
SNX3-204ENST00000426155 DDX49Q9Y6V7 483 aaKnown RBP15.95■□□□□ 0.14
SNX3-204ENST00000426155 BAZ2BQ9UIF8 2168 aaKnown RBP15.94■□□□□ 0.14
SNX3-204ENST00000426155 NECTIN1Q15223 517 aa15.94■□□□□ 0.14
SNX3-204ENST00000426155 GPATCH4Q5T3I0 446 aaKnown RBP15.94■□□□□ 0.14
SNX3-204ENST00000426155 CASC1Q6TDU7 716 aa15.94■□□□□ 0.14
SNX3-204ENST00000426155 STAG2Q8N3U4 1231 aa15.94■□□□□ 0.14
SNX3-204ENST00000426155 PURBQ96QR8 312 aaKnown RBP15.94■□□□□ 0.14
SNX3-204ENST00000426155 TINF2Q9BSI4 451 aa15.94■□□□□ 0.14
SNX3-204ENST00000426155 DDX20Q9UHI6 824 aaKnown RBP15.94■□□□□ 0.14
SNX3-204ENST00000426155 ASTN1O14525 1302 aa15.94■□□□□ 0.14
SNX3-204ENST00000426155 NFIBO00712 420 aa15.93■□□□□ 0.14
SNX3-204ENST00000426155 WTAPQ15007 396 aa15.93■□□□□ 0.14
SNX3-204ENST00000426155 USH1GQ495M9 461 aa15.93■□□□□ 0.14
SNX3-204ENST00000426155 ASPRV1Q53RT3 343 aa15.93■□□□□ 0.14
SNX3-204ENST00000426155 TMEM67Q5HYA8 995 aa15.93■□□□□ 0.14
SNX3-204ENST00000426155 NSMFQ6X4W1 530 aa15.93■□□□□ 0.14
SNX3-204ENST00000426155 ADGRF4Q8IZF3 695 aa15.93■□□□□ 0.14
SNX3-204ENST00000426155 LENG1Q96BZ8 264 aaPredicted RBP15.93■□□□□ 0.14
SNX3-204ENST00000426155 DIS3Q9Y2L1 958 aaKnown RBP15.93■□□□□ 0.14
SNX3-204ENST00000426155 CEP290O15078 2479 aa15.92■□□□□ 0.14
SNX3-204ENST00000426155 SOWAHBA6NEL2 793 aa15.92■□□□□ 0.14
SNX3-204ENST00000426155 PRC1O43663 620 aa15.92■□□□□ 0.14
SNX3-204ENST00000426155 SNAI1O95863 264 aaPredicted RBP15.92■□□□□ 0.14
SNX3-204ENST00000426155 PARP1P09874 1014 aaKnown RBP15.92■□□□□ 0.14
SNX3-204ENST00000426155 CDC37Q16543 378 aaPredicted RBP15.92■□□□□ 0.14
SNX3-204ENST00000426155 TKFCQ3LXA3 575 aa15.92■□□□□ 0.14
SNX3-204ENST00000426155 FAM133AQ8N9E0 248 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms