RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 NUP88Q99567 741 aaPredicted RBP11.88□□□□□ -0.51
MDC1-205ENST00000425072 SLF1Q9BQI6 1058 aa11.88□□□□□ -0.51
MDC1-205ENST00000425072 PHF20Q9BVI0 1012 aa11.88□□□□□ -0.51
MDC1-205ENST00000425072 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.88□□□□□ -0.51
MDC1-205ENST00000425072 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.88□□□□□ -0.51
MDC1-205ENST00000425072 KCNH4Q9UQ05 1017 aa11.88□□□□□ -0.51
MDC1-205ENST00000425072 ESYT2A0FGR8 921 aa11.87□□□□□ -0.51
MDC1-205ENST00000425072 SMCO2A6NFE2 343 aa11.87□□□□□ -0.51
MDC1-205ENST00000425072 IRF6O14896 467 aa11.87□□□□□ -0.51
MDC1-205ENST00000425072 FLOT1O75955 427 aa11.87□□□□□ -0.51
MDC1-205ENST00000425072 PTMSP20962 102 aa11.87□□□□□ -0.51
MDC1-205ENST00000425072 U2AF2P26368 475 aaKnown RBP eCLIP11.87□□□□□ -0.51
MDC1-205ENST00000425072 KRT2P35908 639 aa11.87□□□□□ -0.51
MDC1-205ENST00000425072 NAPAP54920 295 aa11.87□□□□□ -0.51
MDC1-205ENST00000425072 SNAPC2Q13487 334 aa11.87□□□□□ -0.51
MDC1-205ENST00000425072 FOXD4L5Q5VV16 416 aaPredicted RBP11.87□□□□□ -0.51
MDC1-205ENST00000425072 CST9Q5W186 159 aa11.87□□□□□ -0.51
MDC1-205ENST00000425072 OTUD7BQ6GQQ9 843 aa11.87□□□□□ -0.51
MDC1-205ENST00000425072 PPP1R18Q6NYC8 613 aa11.87□□□□□ -0.51
MDC1-205ENST00000425072 CATSPERGQ6ZRH7 1159 aa11.87□□□□□ -0.51
MDC1-205ENST00000425072 FOXD4L4Q8WXT5 416 aaPredicted RBP11.87□□□□□ -0.51
MDC1-205ENST00000425072 KIFC2Q96AC6 838 aa11.87□□□□□ -0.51
MDC1-205ENST00000425072 OTUD5Q96G74 571 aa11.87□□□□□ -0.51
MDC1-205ENST00000425072 CLMNQ96JQ2 1002 aa11.87□□□□□ -0.51
MDC1-205ENST00000425072 TANGO6Q9C0B7 1094 aa11.87□□□□□ -0.51
MDC1-205ENST00000425072 ZMYND12Q9H0C1 365 aa11.87□□□□□ -0.51
MDC1-205ENST00000425072 CPVLQ9H3G5 476 aa11.87□□□□□ -0.51
MDC1-205ENST00000425072 RPAP3Q9H6T3 665 aaPredicted RBP11.87□□□□□ -0.51
MDC1-205ENST00000425072 VPS54Q9P1Q0 977 aa11.87□□□□□ -0.51
MDC1-205ENST00000425072 PCDHA1Q9Y5I3 950 aa11.87□□□□□ -0.51
MDC1-205ENST00000425072 MYPNQ86TC9 1320 aa11.86□□□□□ -0.51
MDC1-205ENST00000425072 A0A0G2JLL6 359 aaPredicted RBP11.86□□□□□ -0.51
MDC1-205ENST00000425072 STXBP3O00186 592 aa11.86□□□□□ -0.51
MDC1-205ENST00000425072 HSPA1AP0DMV8 641 aaKnown RBP11.86□□□□□ -0.51
MDC1-205ENST00000425072 HSPA1BP0DMV9 641 aaKnown RBP11.86□□□□□ -0.51
MDC1-205ENST00000425072 VCAM1P19320 739 aa11.86□□□□□ -0.51
MDC1-205ENST00000425072 OSBPP22059 807 aa11.86□□□□□ -0.51
MDC1-205ENST00000425072 HOXA7P31268 230 aaPredicted RBP11.86□□□□□ -0.51
MDC1-205ENST00000425072 GTF2A2P52657 109 aa11.86□□□□□ -0.51
MDC1-205ENST00000425072 FOSBP53539 338 aa11.86□□□□□ -0.51
MDC1-205ENST00000425072 CDC37Q16543 378 aaPredicted RBP11.86□□□□□ -0.51
MDC1-205ENST00000425072 QRICH1Q2TAL8 776 aa11.86□□□□□ -0.51
MDC1-205ENST00000425072 PRRT2Q7Z6L0 340 aaPredicted RBP11.86□□□□□ -0.51
MDC1-205ENST00000425072 FERMT3Q86UX7 667 aa11.86□□□□□ -0.51
MDC1-205ENST00000425072 DIS3L2Q8IYB7 885 aaKnown RBP11.86□□□□□ -0.51
MDC1-205ENST00000425072 BLIDQ8IZY5 108 aa11.86□□□□□ -0.51
MDC1-205ENST00000425072 SAMD3Q8N6K7 520 aa11.86□□□□□ -0.51
MDC1-205ENST00000425072 SCAND2PQ9GZW5 306 aaPredicted RBP11.86□□□□□ -0.51
MDC1-205ENST00000425072 RANBP17Q9H2T7 1088 aaKnown RBP11.86□□□□□ -0.51
MDC1-205ENST00000425072 PPP1R9AQ9ULJ8 1098 aa11.86□□□□□ -0.51
MDC1-205ENST00000425072 PCDHA4Q9UN74 947 aa11.86□□□□□ -0.51
MDC1-205ENST00000425072 KCNJ14Q9UNX9 436 aa11.86□□□□□ -0.51
MDC1-205ENST00000425072 MRPL11Q9Y3B7 192 aaKnown RBP11.86□□□□□ -0.51
MDC1-205ENST00000425072 TRPM7Q96QT4 1865 aa11.85□□□□□ -0.51
MDC1-205ENST00000425072 BTBD18B2RXH4 712 aa11.85□□□□□ -0.51
MDC1-205ENST00000425072 BAG4O95429 457 aaKnown RBP11.85□□□□□ -0.51
MDC1-205ENST00000425072 ZBTB48P10074 688 aaPredicted RBP11.85□□□□□ -0.51
MDC1-205ENST00000425072 CETPP11597 493 aa11.85□□□□□ -0.51
MDC1-205ENST00000425072 HUNKP57058 714 aa11.85□□□□□ -0.51
MDC1-205ENST00000425072 INHBEP58166 350 aa11.85□□□□□ -0.51
MDC1-205ENST00000425072 KRT85P78386 507 aa11.85□□□□□ -0.51
MDC1-205ENST00000425072 KIF23Q02241 960 aaPredicted RBP11.85□□□□□ -0.51
MDC1-205ENST00000425072 FSTL1Q12841 308 aa11.85□□□□□ -0.51
MDC1-205ENST00000425072 RESTQ13127 1097 aa11.85□□□□□ -0.51
MDC1-205ENST00000425072 SLC35G1Q2M3R5 365 aa11.85□□□□□ -0.51
MDC1-205ENST00000425072 WWC2Q6AWC2 1192 aa11.85□□□□□ -0.51
MDC1-205ENST00000425072 GADL1Q6ZQY3 521 aa11.85□□□□□ -0.51
MDC1-205ENST00000425072 NOSTRINQ8IVI9 506 aa11.85□□□□□ -0.51
MDC1-205ENST00000425072 DAGLBQ8NCG7 672 aa11.85□□□□□ -0.51
MDC1-205ENST00000425072 COA7Q96BR5 231 aa11.85□□□□□ -0.51
MDC1-205ENST00000425072 MAF1Q9H063 256 aa11.85□□□□□ -0.51
MDC1-205ENST00000425072 PSTPIP2Q9H939 334 aa11.85□□□□□ -0.51
MDC1-205ENST00000425072 GJB4Q9NTQ9 266 aa11.85□□□□□ -0.51
MDC1-205ENST00000425072 ADAMTS5Q9UNA0 930 aa11.85□□□□□ -0.51
MDC1-205ENST00000425072 PHIPQ8WWQ0 1821 aa11.85□□□□□ -0.51
MDC1-205ENST00000425072 PAPPA2Q9BXP8 1791 aa11.84□□□□□ -0.51
MDC1-205ENST00000425072 ICAM1P05362 532 aa11.84□□□□□ -0.51
MDC1-205ENST00000425072 NCLP19338 710 aaKnown RBP11.84□□□□□ -0.51
MDC1-205ENST00000425072 OAZ1P54368 228 aa11.84□□□□□ -0.51
MDC1-205ENST00000425072 FMR1Q06787 632 aaKnown RBP eCLIP11.84□□□□□ -0.51
MDC1-205ENST00000425072 RILPL1Q5EBL4 403 aa11.84□□□□□ -0.51
MDC1-205ENST00000425072 RASGRP2Q7LDG7 609 aa11.84□□□□□ -0.51
MDC1-205ENST00000425072 MCF2L2Q86YR7 1114 aa11.84□□□□□ -0.51
MDC1-205ENST00000425072 MB21D1Q8N884 522 aa11.84□□□□□ -0.51
MDC1-205ENST00000425072 GPKOWQ92917 476 aaPredicted RBP eCLIP11.84□□□□□ -0.51
MDC1-205ENST00000425072 CUL5Q93034 780 aa11.84□□□□□ -0.51
MDC1-205ENST00000425072 CCDC102AQ96A19 550 aa11.84□□□□□ -0.51
MDC1-205ENST00000425072 WNK4Q96J92 1243 aa11.84□□□□□ -0.51
MDC1-205ENST00000425072 SLC38A10Q9HBR0 1119 aa11.84□□□□□ -0.51
MDC1-205ENST00000425072 RIC8AQ9NPQ8 531 aa11.84□□□□□ -0.51
MDC1-205ENST00000425072 FBXO28Q9NVF7 368 aa11.84□□□□□ -0.51
MDC1-205ENST00000425072 MAP3K20Q9NYL2 800 aaKnown RBP11.84□□□□□ -0.51
MDC1-205ENST00000425072 NOL7Q9UMY1 257 aaKnown RBP11.84□□□□□ -0.51
MDC1-205ENST00000425072 AGTPBP1Q9UPW5 1226 aa11.84□□□□□ -0.51
MDC1-205ENST00000425072 ABCB11O95342 1321 aa11.84□□□□□ -0.51
MDC1-205ENST00000425072 CCDC194A0A1B0GVG4 234 aa11.83□□□□□ -0.52
MDC1-205ENST00000425072 VWA5AO00534 786 aa11.83□□□□□ -0.52
MDC1-205ENST00000425072 FOSP01100 380 aaPredicted RBP11.83□□□□□ -0.52
MDC1-205ENST00000425072 TRAPPC10P48553 1259 aa11.83□□□□□ -0.52
MDC1-205ENST00000425072 ZNF157P51786 506 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms