RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 DDX11Q96FC9 970 aa15.41■□□□□ 0.06
VRK3-203ENST00000424804 FAM184BQ9ULE4 1060 aa15.41■□□□□ 0.06
VRK3-203ENST00000424804 ASTN1O14525 1302 aa15.41■□□□□ 0.06
VRK3-203ENST00000424804 SOWAHBA6NEL2 793 aa15.4■□□□□ 0.06
VRK3-203ENST00000424804 TRIM6-TRIM34B2RNG4 842 aa15.4■□□□□ 0.06
VRK3-203ENST00000424804 TMEM232C9JQI7 657 aa15.4■□□□□ 0.06
VRK3-203ENST00000424804 NMT2O60551 498 aa15.4■□□□□ 0.06
VRK3-203ENST00000424804 PLA2G6O60733 806 aa15.4■□□□□ 0.06
VRK3-203ENST00000424804 TSPY3P0CV98 308 aa15.4■□□□□ 0.06
VRK3-203ENST00000424804 TSPY8P0CW00 308 aa15.4■□□□□ 0.06
VRK3-203ENST00000424804 CDK7P50613 346 aa15.4■□□□□ 0.06
VRK3-203ENST00000424804 ACLYP53396 1101 aa15.4■□□□□ 0.06
VRK3-203ENST00000424804 NKX3-2P78367 333 aa15.4■□□□□ 0.06
VRK3-203ENST00000424804 CNTN2Q02246 1040 aa15.4■□□□□ 0.06
VRK3-203ENST00000424804 CTDSPL2Q05D32 466 aa15.4■□□□□ 0.06
VRK3-203ENST00000424804 FAAP100Q0VG06 881 aa15.4■□□□□ 0.06
VRK3-203ENST00000424804 ACVR2BQ13705 512 aa15.4■□□□□ 0.06
VRK3-203ENST00000424804 KCNA10Q16322 511 aa15.4■□□□□ 0.06
VRK3-203ENST00000424804 ANKRD33Q7Z3H0 272 aa15.4■□□□□ 0.06
VRK3-203ENST00000424804 FAM133AQ8N9E0 248 aa15.4■□□□□ 0.06
VRK3-203ENST00000424804 CHST13Q8NET6 341 aa15.4■□□□□ 0.06
VRK3-203ENST00000424804 GMCL1Q96IK5 515 aa15.4■□□□□ 0.06
VRK3-203ENST00000424804 AGBL1Q96MI9 1066 aa15.4■□□□□ 0.06
VRK3-203ENST00000424804 NAPBQ9H115 298 aa15.4■□□□□ 0.06
VRK3-203ENST00000424804 UPF3AQ9H1J1 476 aaKnown RBP15.4■□□□□ 0.06
VRK3-203ENST00000424804 ZNF287Q9HBT7 754 aa15.4■□□□□ 0.06
VRK3-203ENST00000424804 PRDM5Q9NQX1 630 aaPredicted RBP15.4■□□□□ 0.06
VRK3-203ENST00000424804 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.4■□□□□ 0.06
VRK3-203ENST00000424804 PRKAG2Q9UGJ0 569 aa15.4■□□□□ 0.06
VRK3-203ENST00000424804 ANAPC4Q9UJX5 808 aa15.4■□□□□ 0.06
VRK3-203ENST00000424804 CNPY2Q9Y2B0 182 aa15.4■□□□□ 0.06
VRK3-203ENST00000424804 DUSP11O75319 330 aaKnown RBP15.39■□□□□ 0.05
VRK3-203ENST00000424804 MCCP23508 829 aa15.39■□□□□ 0.05
VRK3-203ENST00000424804 CST5P28325 142 aaPredicted RBP15.39■□□□□ 0.05
VRK3-203ENST00000424804 SLC4A3P48751 1232 aa15.39■□□□□ 0.05
VRK3-203ENST00000424804 NUCB1Q02818 461 aa15.39■□□□□ 0.05
VRK3-203ENST00000424804 PDE4BQ07343 736 aa15.39■□□□□ 0.05
VRK3-203ENST00000424804 STAG1Q8WVM7 1258 aa15.39■□□□□ 0.05
VRK3-203ENST00000424804 RILPL2Q969X0 211 aa15.39■□□□□ 0.05
VRK3-203ENST00000424804 NACAP1Q9BZK3 213 aa15.39■□□□□ 0.05
VRK3-203ENST00000424804 DDX49Q9Y6V7 483 aaKnown RBP15.39■□□□□ 0.05
VRK3-203ENST00000424804 DLL1O00548 723 aa15.38■□□□□ 0.05
VRK3-203ENST00000424804 CLTBP09497 229 aa15.38■□□□□ 0.05
VRK3-203ENST00000424804 GJA9P57773 515 aa15.38■□□□□ 0.05
VRK3-203ENST00000424804 SNAP25P60880 206 aa15.38■□□□□ 0.05
VRK3-203ENST00000424804 ALX1Q15699 326 aa15.38■□□□□ 0.05
VRK3-203ENST00000424804 CCDC144BQ3MJ40 725 aa15.38■□□□□ 0.05
VRK3-203ENST00000424804 ARMCX2Q7L311 632 aa15.38■□□□□ 0.05
VRK3-203ENST00000424804 ANKRD35Q8N283 1001 aa15.38■□□□□ 0.05
VRK3-203ENST00000424804 CHMP4CQ96CF2 233 aa15.38■□□□□ 0.05
VRK3-203ENST00000424804 TOX2Q96NM4 488 aa15.38■□□□□ 0.05
VRK3-203ENST00000424804 TTYH1Q9H313 450 aaPredicted RBP15.38■□□□□ 0.05
VRK3-203ENST00000424804 A1CFQ9NQ94 594 aaKnown RBP15.38■□□□□ 0.05
VRK3-203ENST00000424804 FBXO40Q9UH90 709 aa15.38■□□□□ 0.05
VRK3-203ENST00000424804 PRUNE2Q8WUY3 3088 aa15.37■□□□□ 0.05
VRK3-203ENST00000424804 LRRC37A2A6NM11 1700 aa15.37■□□□□ 0.05
VRK3-203ENST00000424804 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.37■□□□□ 0.05
VRK3-203ENST00000424804 MOXD2PA6NHM9 499 aa15.37■□□□□ 0.05
VRK3-203ENST00000424804 ORC4O43929 436 aa15.37■□□□□ 0.05
VRK3-203ENST00000424804 FDX1P10109 184 aa15.37■□□□□ 0.05
VRK3-203ENST00000424804 PTGS1P23219 599 aa15.37■□□□□ 0.05
VRK3-203ENST00000424804 MUM1L1Q5H9M0 696 aa15.37■□□□□ 0.05
VRK3-203ENST00000424804 RCSD1Q6JBY9 416 aa15.37■□□□□ 0.05
VRK3-203ENST00000424804 KCTD1Q719H9 257 aa15.37■□□□□ 0.05
VRK3-203ENST00000424804 FAM160B2Q86V87 743 aa15.37■□□□□ 0.05
VRK3-203ENST00000424804 CCDC144CPQ8IYA2 1237 aa15.37■□□□□ 0.05
VRK3-203ENST00000424804 EVI5LQ96CN4 794 aa15.37■□□□□ 0.05
VRK3-203ENST00000424804 FAM227BQ96M60 508 aa15.37■□□□□ 0.05
VRK3-203ENST00000424804 FAM161BQ96MY7 647 aa15.37■□□□□ 0.05
VRK3-203ENST00000424804 SEMA6BQ9H3T3 888 aa15.37■□□□□ 0.05
VRK3-203ENST00000424804 ABHD16BQ9H3Z7 469 aa15.37■□□□□ 0.05
VRK3-203ENST00000424804 ZHX1Q9UKY1 873 aaPredicted RBP15.37■□□□□ 0.05
VRK3-203ENST00000424804 TBX21Q9UL17 535 aa15.37■□□□□ 0.05
VRK3-203ENST00000424804 VCANP13611 3396 aa15.37■□□□□ 0.05
VRK3-203ENST00000424804 PQBP1O60828 265 aaKnown RBP15.36■□□□□ 0.05
VRK3-203ENST00000424804 ASGR1P07306 291 aa15.36■□□□□ 0.05
VRK3-203ENST00000424804 STAT2P52630 851 aa15.36■□□□□ 0.05
VRK3-203ENST00000424804 SMAD3P84022 425 aaKnown RBP15.36■□□□□ 0.05
VRK3-203ENST00000424804 TMEM63BQ5T3F8 832 aa15.36■□□□□ 0.05
VRK3-203ENST00000424804 C16orf59Q7L2K0 433 aa15.36■□□□□ 0.05
VRK3-203ENST00000424804 CHURC1Q8WUH1 139 aa15.36■□□□□ 0.05
VRK3-203ENST00000424804 STARD7Q9NQZ5 370 aa15.36■□□□□ 0.05
VRK3-203ENST00000424804 HOMER2Q9NSB8 354 aa15.36■□□□□ 0.05
VRK3-203ENST00000424804 PRR12Q9ULL5 1215 aa15.36■□□□□ 0.05
VRK3-203ENST00000424804 GNEQ9Y223 722 aaKnown RBP15.36■□□□□ 0.05
VRK3-203ENST00000424804 ELP1O95163 1332 aa15.36■□□□□ 0.05
VRK3-203ENST00000424804 SPTBN5Q9NRC6 3674 aaKnown RBP15.36■□□□□ 0.05
VRK3-203ENST00000424804 A0A0D9SFI3 127 aa15.35■□□□□ 0.05
VRK3-203ENST00000424804 FGAP02671 866 aa15.35■□□□□ 0.05
VRK3-203ENST00000424804 SLC3A2P08195 630 aaKnown RBP15.35■□□□□ 0.05
VRK3-203ENST00000424804 SLC1A4P43007 532 aa15.35■□□□□ 0.05
VRK3-203ENST00000424804 TTBK2Q6IQ55 1244 aa15.35■□□□□ 0.05
VRK3-203ENST00000424804 BTNL9Q6UXG8 535 aa15.35■□□□□ 0.05
VRK3-203ENST00000424804 PLEKHM2Q8IWE5 1019 aa15.35■□□□□ 0.05
VRK3-203ENST00000424804 TRERF1Q96PN7 1200 aa15.35■□□□□ 0.05
VRK3-203ENST00000424804 PURBQ96QR8 312 aaKnown RBP15.35■□□□□ 0.05
VRK3-203ENST00000424804 CDX2Q99626 313 aaPredicted RBP15.35■□□□□ 0.05
VRK3-203ENST00000424804 ACAD9Q9H845 621 aa15.35■□□□□ 0.05
VRK3-203ENST00000424804 HELLSQ9NRZ9 838 aa15.35■□□□□ 0.05
VRK3-203ENST00000424804 RNF146Q9NTX7 359 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms