RNA–Protein interactions for RNA: ENST00000424608.1

NUCB1-204, Transcript of nucleobindin 1, humanhuman

APPRIS ALT2 TSL 5

Gene NUCB1, Length 884 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-204ENST00000424608 SNAP25P60880 206 aa23.46■■□□□ 1.35
NUCB1-204ENST00000424608 CCDC174Q6PII3 467 aa23.46■■□□□ 1.35
NUCB1-204ENST00000424608 RASEFQ8IZ41 740 aa23.46■■□□□ 1.35
NUCB1-204ENST00000424608 TMEM87BQ96K49 555 aa23.46■■□□□ 1.35
NUCB1-204ENST00000424608 AGBL1Q96MI9 1066 aa23.46■■□□□ 1.35
NUCB1-204ENST00000424608 UNC93B1Q9H1C4 597 aa23.46■■□□□ 1.35
NUCB1-204ENST00000424608 FBXO40Q9UH90 709 aa23.46■■□□□ 1.35
NUCB1-204ENST00000424608 ICAM1P05362 532 aa23.45■■□□□ 1.34
NUCB1-204ENST00000424608 TRIM32Q13049 653 aa23.45■■□□□ 1.34
NUCB1-204ENST00000424608 KRT32Q14532 448 aa23.45■■□□□ 1.34
NUCB1-204ENST00000424608 TKFCQ3LXA3 575 aa23.45■■□□□ 1.34
NUCB1-204ENST00000424608 RNF208Q9H0X6 261 aa23.45■■□□□ 1.34
NUCB1-204ENST00000424608 SENP2Q9HC62 589 aa23.45■■□□□ 1.34
NUCB1-204ENST00000424608 FLRT1Q9NZU1 646 aa23.45■■□□□ 1.34
NUCB1-204ENST00000424608 MCM3APO60318 1980 aa23.45■■□□□ 1.34
NUCB1-204ENST00000424608 RPTORQ8N122 1335 aa23.44■■□□□ 1.34
NUCB1-204ENST00000424608 LCTP09848 1927 aa23.44■■□□□ 1.34
NUCB1-204ENST00000424608 HSPA4P34932 840 aa23.44■■□□□ 1.34
NUCB1-204ENST00000424608 COL9A3Q14050 684 aaPredicted RBP23.44■■□□□ 1.34
NUCB1-204ENST00000424608 MAP3K21Q5TCX8 1036 aa23.44■■□□□ 1.34
NUCB1-204ENST00000424608 OLFML2BQ68BL8 750 aa23.44■■□□□ 1.34
NUCB1-204ENST00000424608 KCNB2Q92953 911 aa23.44■■□□□ 1.34
NUCB1-204ENST00000424608 NEK1Q96PY6 1258 aa23.44■■□□□ 1.34
NUCB1-204ENST00000424608 ACAD9Q9H845 621 aa23.44■■□□□ 1.34
NUCB1-204ENST00000424608 LY9Q9HBG7 655 aa23.44■■□□□ 1.34
NUCB1-204ENST00000424608 BAZ2BQ9UIF8 2168 aaKnown RBP23.44■■□□□ 1.34
NUCB1-204ENST00000424608 IGHA2P01877 340 aa23.43■■□□□ 1.34
NUCB1-204ENST00000424608 GJB1P08034 283 aa23.43■■□□□ 1.34
NUCB1-204ENST00000424608 PRKAR2AP13861 404 aaKnown RBP23.43■■□□□ 1.34
NUCB1-204ENST00000424608 MFSD14CQ5VZR4 134 aa23.43■■□□□ 1.34
NUCB1-204ENST00000424608 UBA5Q9GZZ9 404 aa23.43■■□□□ 1.34
NUCB1-204ENST00000424608 HMX1Q9NP08 348 aaPredicted RBP23.43■■□□□ 1.34
NUCB1-204ENST00000424608 PAK6Q9NQU5 681 aaPredicted RBP23.43■■□□□ 1.34
NUCB1-204ENST00000424608 HOMER2Q9NSB8 354 aa23.43■■□□□ 1.34
NUCB1-204ENST00000424608 RNF146Q9NTX7 359 aa23.43■■□□□ 1.34
NUCB1-204ENST00000424608 PNMA2Q9UL42 364 aa23.43■■□□□ 1.34
NUCB1-204ENST00000424608 CCPG1Q9ULG6 757 aa23.43■■□□□ 1.34
NUCB1-204ENST00000424608 DIS3Q9Y2L1 958 aaKnown RBP23.43■■□□□ 1.34
NUCB1-204ENST00000424608 WDR19Q8NEZ3 1342 aa23.42■■□□□ 1.34
NUCB1-204ENST00000424608 SH2B2O14492 632 aaPredicted RBP23.42■■□□□ 1.34
NUCB1-204ENST00000424608 PGK2P07205 417 aa23.42■■□□□ 1.34
NUCB1-204ENST00000424608 ALAS1P13196 640 aa23.42■■□□□ 1.34
NUCB1-204ENST00000424608 TROAPQ12815 778 aa23.42■■□□□ 1.34
NUCB1-204ENST00000424608 GRM4Q14833 912 aa23.42■■□□□ 1.34
NUCB1-204ENST00000424608 ZNF792Q3KQV3 632 aa23.42■■□□□ 1.34
NUCB1-204ENST00000424608 CATIPQ7Z7H3 387 aa23.42■■□□□ 1.34
NUCB1-204ENST00000424608 TMTC2Q8N394 836 aa23.42■■□□□ 1.34
NUCB1-204ENST00000424608 STAG2Q8N3U4 1231 aa23.42■■□□□ 1.34
NUCB1-204ENST00000424608 DDX11Q96FC9 970 aa23.42■■□□□ 1.34
NUCB1-204ENST00000424608 MAML3Q96JK9 1138 aa23.42■■□□□ 1.34
NUCB1-204ENST00000424608 TRERF1Q96PN7 1200 aa23.42■■□□□ 1.34
NUCB1-204ENST00000424608 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.42■■□□□ 1.34
NUCB1-204ENST00000424608 CPVLQ9H3G5 476 aa23.42■■□□□ 1.34
NUCB1-204ENST00000424608 MAD2L2Q9UI95 211 aa23.42■■□□□ 1.34
NUCB1-204ENST00000424608 DNAJC25-GNG10A0A024R161 153 aa23.41■■□□□ 1.34
NUCB1-204ENST00000424608 PALM3A6NDB9 673 aaPredicted RBP23.41■■□□□ 1.34
NUCB1-204ENST00000424608 EN2P19622 333 aaPredicted RBP23.41■■□□□ 1.34
NUCB1-204ENST00000424608 LIFRP42702 1097 aa23.41■■□□□ 1.34
NUCB1-204ENST00000424608 CACNB2Q08289 660 aaPredicted RBP23.41■■□□□ 1.34
NUCB1-204ENST00000424608 ADCK5Q3MIX3 580 aa23.41■■□□□ 1.34
NUCB1-204ENST00000424608 ANKRD35Q8N283 1001 aa23.41■■□□□ 1.34
NUCB1-204ENST00000424608 GPHNQ9NQX3 736 aaPredicted RBP23.41■■□□□ 1.34
NUCB1-204ENST00000424608 GJA8P48165 433 aa23.4■■□□□ 1.34
NUCB1-204ENST00000424608 DHX32Q7L7V1 743 aaKnown RBP23.4■■□□□ 1.34
NUCB1-204ENST00000424608 ADGRF4Q8IZF3 695 aa23.4■■□□□ 1.34
NUCB1-204ENST00000424608 ZNF654Q8IZM8 581 aa23.4■■□□□ 1.34
NUCB1-204ENST00000424608 KLRF2D3W0D1 207 aa23.39■■□□□ 1.33
NUCB1-204ENST00000424608 DDAH1O94760 285 aa23.39■■□□□ 1.33
NUCB1-204ENST00000424608 HMGB1P09429 215 aaKnown RBP23.39■■□□□ 1.33
NUCB1-204ENST00000424608 CDC37Q16543 378 aaPredicted RBP23.39■■□□□ 1.33
NUCB1-204ENST00000424608 U2AF1L4Q8WU68 220 aaKnown RBP23.39■■□□□ 1.33
NUCB1-204ENST00000424608 DEFB118Q96PH6 123 aa23.39■■□□□ 1.33
NUCB1-204ENST00000424608 MAP3K14Q99558 947 aa23.39■■□□□ 1.33
NUCB1-204ENST00000424608 A1CFQ9NQ94 594 aaKnown RBP23.39■■□□□ 1.33
NUCB1-204ENST00000424608 SNX14Q9Y5W7 946 aa23.39■■□□□ 1.33
NUCB1-204ENST00000424608 PFASO15067 1338 aa23.38■■□□□ 1.33
NUCB1-204ENST00000424608 CCDC69A6NI79 296 aa23.38■■□□□ 1.33
NUCB1-204ENST00000424608 SGPL1O95470 568 aa23.38■■□□□ 1.33
NUCB1-204ENST00000424608 TAL1P17542 331 aaPredicted RBP23.38■■□□□ 1.33
NUCB1-204ENST00000424608 CYP2C19P33261 490 aa23.38■■□□□ 1.33
NUCB1-204ENST00000424608 EXOSC10Q01780 885 aaKnown RBP23.38■■□□□ 1.33
NUCB1-204ENST00000424608 MUM1L1Q5H9M0 696 aa23.38■■□□□ 1.33
NUCB1-204ENST00000424608 NFXL1Q6ZNB6 911 aa23.38■■□□□ 1.33
NUCB1-204ENST00000424608 SHISA4Q96DD7 197 aa23.38■■□□□ 1.33
NUCB1-204ENST00000424608 USP26Q9BXU7 913 aa23.38■■□□□ 1.33
NUCB1-204ENST00000424608 LRRC2Q9BYS8 371 aa23.38■■□□□ 1.33
NUCB1-204ENST00000424608 DHX16O60231 1041 aaKnown RBP23.37■■□□□ 1.33
NUCB1-204ENST00000424608 CAPN2P17655 700 aa23.37■■□□□ 1.33
NUCB1-204ENST00000424608 SGMS1Q86VZ5 419 aa23.37■■□□□ 1.33
NUCB1-204ENST00000424608 NUP133Q8WUM0 1156 aa23.37■■□□□ 1.33
NUCB1-204ENST00000424608 JMJD4Q9H9V9 463 aa23.37■■□□□ 1.33
NUCB1-204ENST00000424608 CYBAP13498 195 aa23.36■■□□□ 1.33
NUCB1-204ENST00000424608 CCND3P30281 292 aaPredicted RBP23.36■■□□□ 1.33
NUCB1-204ENST00000424608 MLLT1Q03111 559 aaPredicted RBP23.36■■□□□ 1.33
NUCB1-204ENST00000424608 ZNF467Q7Z7K2 595 aaPredicted RBP23.36■■□□□ 1.33
NUCB1-204ENST00000424608 MSL3Q8N5Y2 521 aaKnown RBP23.36■■□□□ 1.33
NUCB1-204ENST00000424608 CTCFLQ8NI51 663 aaPredicted RBP23.36■■□□□ 1.33
NUCB1-204ENST00000424608 TINF2Q9BSI4 451 aa23.36■■□□□ 1.33
NUCB1-204ENST00000424608 MYL10Q9BUA6 226 aa23.36■■□□□ 1.33
NUCB1-204ENST00000424608 CRISPLD2Q9H0B8 497 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms