RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 M0R2N6 131 aa17.06■□□□□ 0.32
C9orf3-204ENST00000424143 ABL1P00519 1130 aa17.06■□□□□ 0.32
C9orf3-204ENST00000424143 CHRNDQ07001 517 aa17.06■□□□□ 0.32
C9orf3-204ENST00000424143 ORC2Q13416 577 aaPredicted RBP17.06■□□□□ 0.32
C9orf3-204ENST00000424143 CCDC122Q5T0U0 273 aa17.06■□□□□ 0.32
C9orf3-204ENST00000424143 CCDC70Q6NSX1 233 aa17.06■□□□□ 0.32
C9orf3-204ENST00000424143 LRRC31Q6UY01 552 aa17.06■□□□□ 0.32
C9orf3-204ENST00000424143 CCNI2Q6ZMN8 369 aaPredicted RBP17.06■□□□□ 0.32
C9orf3-204ENST00000424143 ADGRA1Q86SQ6 560 aa17.06■□□□□ 0.32
C9orf3-204ENST00000424143 ZSCAN29Q8IWY8 852 aaPredicted RBP17.06■□□□□ 0.32
C9orf3-204ENST00000424143 BLIDQ8IZY5 108 aa17.06■□□□□ 0.32
C9orf3-204ENST00000424143 CCDC102AQ96A19 550 aa17.06■□□□□ 0.32
C9orf3-204ENST00000424143 CCDC47Q96A33 483 aaKnown RBP17.06■□□□□ 0.32
C9orf3-204ENST00000424143 ATP8A2Q9NTI2 1148 aa17.06■□□□□ 0.32
C9orf3-204ENST00000424143 TAOK2Q9UL54 1235 aa17.06■□□□□ 0.32
C9orf3-204ENST00000424143 GUCA1BQ9UMX6 200 aa17.06■□□□□ 0.32
C9orf3-204ENST00000424143 PCDHA4Q9UN74 947 aa17.06■□□□□ 0.32
C9orf3-204ENST00000424143 N4BP1O75113 896 aaKnown RBP17.05■□□□□ 0.32
C9orf3-204ENST00000424143 IPO7O95373 1038 aaKnown RBP17.05■□□□□ 0.32
C9orf3-204ENST00000424143 CDC25AP30304 524 aa17.05■□□□□ 0.32
C9orf3-204ENST00000424143 CORO7P57737 925 aa17.05■□□□□ 0.32
C9orf3-204ENST00000424143 NAALADL2Q58DX5 795 aa17.05■□□□□ 0.32
C9orf3-204ENST00000424143 NCAPH2Q6IBW4 605 aa17.05■□□□□ 0.32
C9orf3-204ENST00000424143 SDR42E1Q8WUS8 393 aa17.05■□□□□ 0.32
C9orf3-204ENST00000424143 JAKMIP2Q96AA8 810 aa17.05■□□□□ 0.32
C9orf3-204ENST00000424143 EXOC1Q9NV70 894 aa17.05■□□□□ 0.32
C9orf3-204ENST00000424143 SCN7AQ01118 1682 aa17.05■□□□□ 0.32
C9orf3-204ENST00000424143 RNF40O75150 1001 aa17.04■□□□□ 0.32
C9orf3-204ENST00000424143 LCA5LO95447 670 aa17.04■□□□□ 0.32
C9orf3-204ENST00000424143 CPP00450 1065 aa17.04■□□□□ 0.32
C9orf3-204ENST00000424143 CCNE1P24864 410 aa17.04■□□□□ 0.32
C9orf3-204ENST00000424143 TNFRSF8P28908 595 aa17.04■□□□□ 0.32
C9orf3-204ENST00000424143 DTHD1Q6ZMT9 781 aa17.04■□□□□ 0.32
C9orf3-204ENST00000424143 GBP6Q6ZN66 633 aa17.04■□□□□ 0.32
C9orf3-204ENST00000424143 PIK3AP1Q6ZUJ8 805 aa17.04■□□□□ 0.32
C9orf3-204ENST00000424143 FAM204AQ9H8W3 233 aa17.04■□□□□ 0.32
C9orf3-204ENST00000424143 SUGCTQ9HAC7 445 aa17.04■□□□□ 0.32
C9orf3-204ENST00000424143 KIAA1551Q9HCM1 1747 aa17.04■□□□□ 0.32
C9orf3-204ENST00000424143 NTSR2O95665 410 aa17.03■□□□□ 0.32
C9orf3-204ENST00000424143 VAV2P52735 878 aa17.03■□□□□ 0.32
C9orf3-204ENST00000424143 KIAA1328Q86T90 577 aa17.03■□□□□ 0.32
C9orf3-204ENST00000424143 DGKHQ86XP1 1220 aa17.03■□□□□ 0.32
C9orf3-204ENST00000424143 CCDC155Q8N6L0 562 aa17.03■□□□□ 0.32
C9orf3-204ENST00000424143 MMS19Q96T76 1030 aa17.03■□□□□ 0.32
C9orf3-204ENST00000424143 C7orf25Q9BPX7 421 aa17.03■□□□□ 0.32
C9orf3-204ENST00000424143 EDEM3Q9BZQ6 932 aa17.03■□□□□ 0.32
C9orf3-204ENST00000424143 ARPP21Q9UBL0 812 aaPredicted RBP17.03■□□□□ 0.32
C9orf3-204ENST00000424143 GDAQ9Y2T3 454 aa17.03■□□□□ 0.32
C9orf3-204ENST00000424143 JRKLQ9Y4A0 524 aa17.03■□□□□ 0.32
C9orf3-204ENST00000424143 MAST2Q6P0Q8 1798 aa17.03■□□□□ 0.32
C9orf3-204ENST00000424143 ATP1A1P05023 1023 aaKnown RBP17.03■□□□□ 0.32
C9orf3-204ENST00000424143 MCM7P33993 719 aa17.03■□□□□ 0.32
C9orf3-204ENST00000424143 TRIM58Q8NG06 486 aa17.03■□□□□ 0.32
C9orf3-204ENST00000424143 AENQ8WTP8 325 aaKnown RBP17.03■□□□□ 0.32
C9orf3-204ENST00000424143 LZTS2Q9BRK4 669 aa17.03■□□□□ 0.32
C9orf3-204ENST00000424143 FAM184BQ9ULE4 1060 aa17.03■□□□□ 0.32
C9orf3-204ENST00000424143 BAZ2AQ9UIF9 1905 aaKnown RBP17.02■□□□□ 0.32
C9orf3-204ENST00000424143 CAMTA2O94983 1202 aa17.02■□□□□ 0.31
C9orf3-204ENST00000424143 EPB41P11171 864 aaKnown RBP17.02■□□□□ 0.31
C9orf3-204ENST00000424143 SF3B3Q15393 1217 aaKnown RBP17.02■□□□□ 0.31
C9orf3-204ENST00000424143 FBXO33Q7Z6M2 555 aa17.02■□□□□ 0.31
C9orf3-204ENST00000424143 P2RX5Q93086 422 aa17.02■□□□□ 0.31
C9orf3-204ENST00000424143 DUSP9Q99956 384 aaKnown RBP17.02■□□□□ 0.31
C9orf3-204ENST00000424143 TUBGCP2Q9BSJ2 902 aa17.02■□□□□ 0.31
C9orf3-204ENST00000424143 CRNKL1Q9BZJ0 848 aaKnown RBP17.02■□□□□ 0.31
C9orf3-204ENST00000424143 TCP11L1Q9NUJ3 509 aa17.02■□□□□ 0.31
C9orf3-204ENST00000424143 CCDC87Q9NVE4 849 aa17.02■□□□□ 0.31
C9orf3-204ENST00000424143 LCMT1Q9UIC8 334 aa17.02■□□□□ 0.31
C9orf3-204ENST00000424143 A0A0U1RQG5 324 aaPredicted RBP17.01■□□□□ 0.31
C9orf3-204ENST00000424143 USO1O60763 962 aaKnown RBP17.01■□□□□ 0.31
C9orf3-204ENST00000424143 KIF5AQ12840 1032 aa17.01■□□□□ 0.31
C9orf3-204ENST00000424143 NNTQ13423 1086 aa17.01■□□□□ 0.31
C9orf3-204ENST00000424143 CAVIN4Q5BKX8 364 aa17.01■□□□□ 0.31
C9orf3-204ENST00000424143 INTS5Q6P9B9 1019 aaKnown RBP17.01■□□□□ 0.31
C9orf3-204ENST00000424143 PPM1EQ8WY54 764 aa17.01■□□□□ 0.31
C9orf3-204ENST00000424143 STAMQ92783 540 aa17.01■□□□□ 0.31
C9orf3-204ENST00000424143 TRIM47Q96LD4 638 aa17.01■□□□□ 0.31
C9orf3-204ENST00000424143 CRACR2AQ9BSW2 395 aa17.01■□□□□ 0.31
C9orf3-204ENST00000424143 NHEJ1Q9H9Q4 299 aaPredicted RBP17.01■□□□□ 0.31
C9orf3-204ENST00000424143 BSDC1Q9NW68 430 aaPredicted RBP17.01■□□□□ 0.31
C9orf3-204ENST00000424143 RNF14Q9UBS8 474 aa17.01■□□□□ 0.31
C9orf3-204ENST00000424143 COL1A1P02452 1464 aaPredicted RBP17.01■□□□□ 0.31
C9orf3-204ENST00000424143 RASSF10A6NK89 507 aa17■□□□□ 0.31
C9orf3-204ENST00000424143 NUTM2BA6NNL0 878 aaPredicted RBP17■□□□□ 0.31
C9orf3-204ENST00000424143 NUTM2EB1AL46 878 aaPredicted RBP17■□□□□ 0.31
C9orf3-204ENST00000424143 USP17L12C9JPN9 530 aa17■□□□□ 0.31
C9orf3-204ENST00000424143 USP17L21D6R901 530 aa17■□□□□ 0.31
C9orf3-204ENST00000424143 SNAP23O00161 211 aa17■□□□□ 0.31
C9orf3-204ENST00000424143 PJA2O43164 708 aa17■□□□□ 0.31
C9orf3-204ENST00000424143 UBA7P41226 1012 aa17■□□□□ 0.31
C9orf3-204ENST00000424143 GRM4Q14833 912 aa17■□□□□ 0.31
C9orf3-204ENST00000424143 GLE1Q53GS7 698 aaKnown RBP17■□□□□ 0.31
C9orf3-204ENST00000424143 DNAJC21Q5F1R6 531 aaKnown RBP17■□□□□ 0.31
C9orf3-204ENST00000424143 ALS2CLQ60I27 953 aa17■□□□□ 0.31
C9orf3-204ENST00000424143 EFCAB13Q8IY85 973 aa17■□□□□ 0.31
C9orf3-204ENST00000424143 SH3GL2Q99962 352 aa17■□□□□ 0.31
C9orf3-204ENST00000424143 TRIM34Q9BYJ4 488 aa17■□□□□ 0.31
C9orf3-204ENST00000424143 SNX12Q9UMY4 172 aa17■□□□□ 0.31
C9orf3-204ENST00000424143 PLAGL2Q9UPG8 496 aa17■□□□□ 0.31
C9orf3-204ENST00000424143 GOLGA8KD6RF30 607 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms