RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 MRPL44Q9H9J2 332 aaKnown RBP13.47□□□□□ -0.25
PTPRN-204ENST00000423636 BARHL2Q9NY43 387 aa13.47□□□□□ -0.25
PTPRN-204ENST00000423636 ZBTB12Q9Y330 459 aaPredicted RBP13.47□□□□□ -0.25
PTPRN-204ENST00000423636 SRGNP10124 158 aa13.47□□□□□ -0.25
PTPRN-204ENST00000423636 ASIC1P78348 528 aa13.47□□□□□ -0.25
PTPRN-204ENST00000423636 CRY2Q49AN0 593 aa13.47□□□□□ -0.25
PTPRN-204ENST00000423636 PDXDC2PQ6P474 469 aa13.47□□□□□ -0.25
PTPRN-204ENST00000423636 C4orf32Q8N8J7 132 aa13.47□□□□□ -0.25
PTPRN-204ENST00000423636 CERKQ8TCT0 537 aa13.47□□□□□ -0.25
PTPRN-204ENST00000423636 RRP36Q96EU6 259 aaKnown RBP13.47□□□□□ -0.25
PTPRN-204ENST00000423636 BPIFA3Q9BQP9 254 aa13.47□□□□□ -0.25
PTPRN-204ENST00000423636 A0A1B0GUL6 1792 aa13.47□□□□□ -0.25
PTPRN-204ENST00000423636 PALM3A6NDB9 673 aaPredicted RBP13.46□□□□□ -0.25
PTPRN-204ENST00000423636 C21orf2O43822 256 aa13.46□□□□□ -0.25
PTPRN-204ENST00000423636 PDHBP11177 359 aa13.46□□□□□ -0.25
PTPRN-204ENST00000423636 KRT31Q15323 416 aa13.46□□□□□ -0.25
PTPRN-204ENST00000423636 KMT5BQ4FZB7 885 aa13.46□□□□□ -0.25
PTPRN-204ENST00000423636 SRRTQ9BXP5 876 aaKnown RBP13.46□□□□□ -0.25
PTPRN-204ENST00000423636 BCAS3Q9H6U6 928 aa13.46□□□□□ -0.25
PTPRN-204ENST00000423636 ARAP2Q8WZ64 1704 aa13.46□□□□□ -0.25
PTPRN-204ENST00000423636 PPP1R11O60927 126 aaPredicted RBP13.46□□□□□ -0.25
PTPRN-204ENST00000423636 BBOX1O75936 387 aa13.46□□□□□ -0.25
PTPRN-204ENST00000423636 RAD17O75943 681 aa13.46□□□□□ -0.25
PTPRN-204ENST00000423636 E2F4Q16254 413 aa13.46□□□□□ -0.25
PTPRN-204ENST00000423636 C16orf86Q6ZW13 317 aa13.46□□□□□ -0.25
PTPRN-204ENST00000423636 CARD6Q9BX69 1037 aa13.46□□□□□ -0.25
PTPRN-204ENST00000423636 PPP2R2CQ9Y2T4 447 aa13.46□□□□□ -0.25
PTPRN-204ENST00000423636 CASZ1Q86V15 1759 aa13.46□□□□□ -0.26
PTPRN-204ENST00000423636 TCP10L2B9ZVM9 353 aa13.46□□□□□ -0.26
PTPRN-204ENST00000423636 ZNF18P17022 549 aa13.46□□□□□ -0.26
PTPRN-204ENST00000423636 UBXN1Q04323 297 aa13.46□□□□□ -0.26
PTPRN-204ENST00000423636 EN1Q05925 392 aaPredicted RBP13.46□□□□□ -0.26
PTPRN-204ENST00000423636 STK4Q13043 487 aa13.46□□□□□ -0.26
PTPRN-204ENST00000423636 MCM6Q14566 821 aa13.46□□□□□ -0.26
PTPRN-204ENST00000423636 RAD9BQ6WBX8 426 aa13.46□□□□□ -0.26
PTPRN-204ENST00000423636 C2CD5Q86YS7 1000 aa13.46□□□□□ -0.26
PTPRN-204ENST00000423636 CCDC150Q8NCX0 1101 aa13.46□□□□□ -0.26
PTPRN-204ENST00000423636 FERMT2Q96AC1 680 aa13.46□□□□□ -0.26
PTPRN-204ENST00000423636 FAM237AA0A1B0GTK4 181 aa13.45□□□□□ -0.26
PTPRN-204ENST00000423636 IL1R1P14778 569 aa13.45□□□□□ -0.26
PTPRN-204ENST00000423636 STAT3P40763 770 aa13.45□□□□□ -0.26
PTPRN-204ENST00000423636 MIGA2Q7L4E1 593 aa13.45□□□□□ -0.26
PTPRN-204ENST00000423636 CABP7Q86V35 215 aa13.45□□□□□ -0.26
PTPRN-204ENST00000423636 PPFIBP1Q86W92 1011 aa13.45□□□□□ -0.26
PTPRN-204ENST00000423636 ADGRF4Q8IZF3 695 aa13.45□□□□□ -0.26
PTPRN-204ENST00000423636 ENOX1Q8TC92 643 aaKnown RBP13.45□□□□□ -0.26
PTPRN-204ENST00000423636 TRIM47Q96LD4 638 aa13.45□□□□□ -0.26
PTPRN-204ENST00000423636 SERPINB13Q9UIV8 391 aa13.45□□□□□ -0.26
PTPRN-204ENST00000423636 NPHP3-ACAD11A0A0J9YXS1 232 aa13.45□□□□□ -0.26
PTPRN-204ENST00000423636 CBFA2T2O43439 604 aa13.45□□□□□ -0.26
PTPRN-204ENST00000423636 HOXA13P31271 388 aaPredicted RBP13.45□□□□□ -0.26
PTPRN-204ENST00000423636 JAG1P78504 1218 aa13.45□□□□□ -0.26
PTPRN-204ENST00000423636 SEPT2Q15019 361 aa13.45□□□□□ -0.26
PTPRN-204ENST00000423636 CCDC155Q8N6L0 562 aa13.45□□□□□ -0.26
PTPRN-204ENST00000423636 ZNF579Q8NAF0 562 aaKnown RBP13.45□□□□□ -0.26
PTPRN-204ENST00000423636 CHP1Q99653 195 aa13.45□□□□□ -0.26
PTPRN-204ENST00000423636 DISC1Q9NRI5 854 aa13.45□□□□□ -0.26
PTPRN-204ENST00000423636 MTMR4Q9NYA4 1195 aa13.45□□□□□ -0.26
PTPRN-204ENST00000423636 PUF60Q9UHX1 559 aaKnown RBP13.45□□□□□ -0.26
PTPRN-204ENST00000423636 PARP3Q9Y6F1 533 aa13.45□□□□□ -0.26
PTPRN-204ENST00000423636 RBAK-RBAKDNI3L0D1 243 aa13.44□□□□□ -0.26
PTPRN-204ENST00000423636 NEMFO60524 1076 aa13.44□□□□□ -0.26
PTPRN-204ENST00000423636 KCNK18Q7Z418 384 aa13.44□□□□□ -0.26
PTPRN-204ENST00000423636 NEDD1Q8NHV4 660 aa13.44□□□□□ -0.26
PTPRN-204ENST00000423636 SLF1Q9BQI6 1058 aa13.44□□□□□ -0.26
PTPRN-204ENST00000423636 DNAH12Q6ZR08 3092 aa13.44□□□□□ -0.26
PTPRN-204ENST00000423636 CALML3P27482 149 aa13.44□□□□□ -0.26
PTPRN-204ENST00000423636 TXLNAP40222 546 aa13.44□□□□□ -0.26
PTPRN-204ENST00000423636 PPP4CP60510 307 aa13.44□□□□□ -0.26
PTPRN-204ENST00000423636 PDE4DQ08499 809 aa13.44□□□□□ -0.26
PTPRN-204ENST00000423636 SPATA1Q5VX52 437 aa13.44□□□□□ -0.26
PTPRN-204ENST00000423636 TMEM139Q8IV31 216 aa13.44□□□□□ -0.26
PTPRN-204ENST00000423636 REXO1L1PQ8IX06 675 aa13.44□□□□□ -0.26
PTPRN-204ENST00000423636 REXO1Q8N1G1 1221 aaKnown RBP13.44□□□□□ -0.26
PTPRN-204ENST00000423636 B4DLN1 442 aa13.44□□□□□ -0.26
PTPRN-204ENST00000423636 MEIS1O00470 390 aa13.44□□□□□ -0.26
PTPRN-204ENST00000423636 NR1I3Q14994 352 aa13.44□□□□□ -0.26
PTPRN-204ENST00000423636 NONOQ15233 471 aaKnown RBP eCLIP13.44□□□□□ -0.26
PTPRN-204ENST00000423636 RBM26Q5T8P6 1007 aaKnown RBP13.44□□□□□ -0.26
PTPRN-204ENST00000423636 AEBP2Q6ZN18 517 aaPredicted RBP13.44□□□□□ -0.26
PTPRN-204ENST00000423636 DNAJC18Q9H819 358 aa13.44□□□□□ -0.26
PTPRN-204ENST00000423636 IMPACTQ9P2X3 320 aa13.44□□□□□ -0.26
PTPRN-204ENST00000423636 ATP6V0A2Q9Y487 856 aa13.44□□□□□ -0.26
PTPRN-204ENST00000423636 SNED1Q8TER0 1413 aa13.44□□□□□ -0.26
PTPRN-204ENST00000423636 KCNJ18B7U540 433 aa13.43□□□□□ -0.26
PTPRN-204ENST00000423636 NRDCO43847 1150 aa13.43□□□□□ -0.26
PTPRN-204ENST00000423636 CRKP46108 304 aa13.43□□□□□ -0.26
PTPRN-204ENST00000423636 APBA1Q02410 837 aa13.43□□□□□ -0.26
PTPRN-204ENST00000423636 PAK1Q13153 545 aa13.43□□□□□ -0.26
PTPRN-204ENST00000423636 KCNJ12Q14500 433 aa13.43□□□□□ -0.26
PTPRN-204ENST00000423636 APOBEC3HQ6NTF7 200 aaKnown RBP13.43□□□□□ -0.26
PTPRN-204ENST00000423636 TMX4Q9H1E5 349 aaPredicted RBP13.43□□□□□ -0.26
PTPRN-204ENST00000423636 BRCA2P51587 3418 aa13.43□□□□□ -0.26
PTPRN-204ENST00000423636 SCN7AQ01118 1682 aa13.43□□□□□ -0.26
PTPRN-204ENST00000423636 SEC31AO94979 1220 aaKnown RBP13.43□□□□□ -0.26
PTPRN-204ENST00000423636 DGKZQ13574 1117 aa13.43□□□□□ -0.26
PTPRN-204ENST00000423636 PPP2R5BQ15173 497 aa13.43□□□□□ -0.26
PTPRN-204ENST00000423636 ECM1Q16610 540 aa13.43□□□□□ -0.26
PTPRN-204ENST00000423636 GLIPR1L2Q4G1C9 344 aa13.43□□□□□ -0.26
PTPRN-204ENST00000423636 SH3RF1Q7Z6J0 888 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms