RNA–Protein interactions for RNA: ENST00000423572.6

SCN5A-205, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN5A, Length 8,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-205ENST00000423572 NPR1P16066 1061 aa12.13□□□□□ -0.47
SCN5A-205ENST00000423572 RBM6P78332 1123 aaKnown RBP12.13□□□□□ -0.47
SCN5A-205ENST00000423572 LRMPQ12912 555 aa12.13□□□□□ -0.47
SCN5A-205ENST00000423572 PRIMPOLQ96LW4 560 aa12.13□□□□□ -0.47
SCN5A-205ENST00000423572 KRT12Q99456 494 aa12.13□□□□□ -0.47
SCN5A-205ENST00000423572 ATP8A2Q9NTI2 1148 aa12.13□□□□□ -0.47
SCN5A-205ENST00000423572 RNF8O76064 485 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 CEP85LQ5SZL2 805 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 ZFYVE28Q9HCC9 887 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 RAB20Q9NX57 234 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 FBXL21Q9UKT6 434 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 GUCA1BQ9UMX6 200 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.12□□□□□ -0.47
SCN5A-205ENST00000423572 RAPGEF6Q8TEU7 1601 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 MOCS3O95396 460 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 VCX3BQ9H321 246 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 HELLSQ9NRZ9 838 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 IFNA8P32881 189 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 SOX5P35711 763 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 CTSWP56202 376 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 CCDC62Q6P9F0 684 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 BRAPQ7Z569 592 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 SDCCAG3Q96C92 435 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 CROCCP2Q86T23 111 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 TMEM87BQ96K49 555 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 V9GY48 417 aaPredicted RBP12.12□□□□□ -0.47
SCN5A-205ENST00000423572 ASXL1Q8IXJ9 1541 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 C21orf2O43822 256 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 RAPH1Q70E73 1250 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 PLA2G4DQ86XP0 818 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 SLC52A2Q9HAB3 445 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 HOXC9P31274 260 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 BTDP43251 543 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 ARFGAP2Q8N6H7 521 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 ZNF653Q96CK0 615 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 C16orf45Q96MC5 204 aaPredicted RBP12.12□□□□□ -0.47
SCN5A-205ENST00000423572 ESRRBO95718 433 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 ARHGAP44Q17R89 818 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 IFNLR1Q8IU57 520 aaPredicted RBP12.12□□□□□ -0.47
SCN5A-205ENST00000423572 CDC26Q8NHZ8 85 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 COG4Q9H9E3 785 aa12.12□□□□□ -0.47
SCN5A-205ENST00000423572 TBC1D10BQ4KMP7 808 aaPredicted RBP12.11□□□□□ -0.47
SCN5A-205ENST00000423572 C14orf93Q9H972 538 aaKnown RBP12.11□□□□□ -0.47
SCN5A-205ENST00000423572 UNC13AQ9UPW8 1703 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 WDR97A6NE52 1622 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 ERVV-2B6SEH9 535 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 SLC12A1Q13621 1099 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 MYSM1Q5VVJ2 828 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 TTC23LQ6PF05 361 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 UBN2Q6ZU65 1347 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 NEUROG2Q9H2A3 272 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 PPFIA2O75334 1257 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 A1BGP04217 495 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 ABCD1P33897 745 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 MIGA2Q7L4E1 593 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 CEP120Q8N960 986 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 METTL22Q9BUU2 404 aaPredicted RBP12.11□□□□□ -0.47
SCN5A-205ENST00000423572 SMYD2Q9NRG4 433 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 EIF4A2Q14240 407 aaKnown RBP12.11□□□□□ -0.47
SCN5A-205ENST00000423572 FAM182BQ5T319 152 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 USPL1Q5W0Q7 1092 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 CPLX4Q7Z7G2 160 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 TCEANC2Q96MN5 208 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 RBSNQ9H1K0 784 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 RPF1Q9H9Y2 349 aaKnown RBP12.11□□□□□ -0.47
SCN5A-205ENST00000423572 RIPOR2Q9Y4F9 1068 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 PDE6CP51160 858 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 VAV2P52735 878 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 C16orf72Q14CZ0 275 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 ARL13BQ3SXY8 428 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 CTAGE3PQ8IX95 158 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 DNAJC10Q8IXB1 793 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 FAM178BQ8IXR5 827 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 SH3KBP1Q96B97 665 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 RILPQ96NA2 401 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 TTC41PQ6P2S7 1318 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 N4BP1O75113 896 aaKnown RBP12.11□□□□□ -0.47
SCN5A-205ENST00000423572 MMP10P09238 476 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 IL1RL1Q01638 556 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 IFT122Q9HBG6 1241 aa12.11□□□□□ -0.47
SCN5A-205ENST00000423572 SUCLA2Q9P2R7 463 aaPredicted RBP12.11□□□□□ -0.47
SCN5A-205ENST00000423572 HNRNPDLO14979 420 aaKnown RBP12.1□□□□□ -0.47
SCN5A-205ENST00000423572 EIF2B5Q13144 721 aaKnown RBP12.1□□□□□ -0.47
SCN5A-205ENST00000423572 UBXN8O00124 270 aa12.1□□□□□ -0.47
SCN5A-205ENST00000423572 EYA2O00167 538 aa12.1□□□□□ -0.47
SCN5A-205ENST00000423572 FBLN1P23142 703 aa12.1□□□□□ -0.47
SCN5A-205ENST00000423572 ANGPTL8Q6UXH0 198 aa12.1□□□□□ -0.47
SCN5A-205ENST00000423572 NLRP4Q96MN2 994 aa12.1□□□□□ -0.47
SCN5A-205ENST00000423572 LOC102724428A0A0B4J2F2 783 aa12.1□□□□□ -0.47
SCN5A-205ENST00000423572 SMCO2A6NFE2 343 aa12.1□□□□□ -0.47
SCN5A-205ENST00000423572 CCDC85CA6NKD9 419 aa12.1□□□□□ -0.47
SCN5A-205ENST00000423572 SIK1P57059 783 aa12.1□□□□□ -0.47
SCN5A-205ENST00000423572 ARHGAP4P98171 946 aa12.1□□□□□ -0.47
SCN5A-205ENST00000423572 PHLDB2Q86SQ0 1253 aa12.1□□□□□ -0.47
SCN5A-205ENST00000423572 MAIP1Q8WWC4 291 aa12.1□□□□□ -0.47
SCN5A-205ENST00000423572 SUFUQ9UMX1 484 aa12.1□□□□□ -0.47
SCN5A-205ENST00000423572 GARSP41250 739 aaKnown RBP12.1□□□□□ -0.47
SCN5A-205ENST00000423572 ST8SIA6P61647 398 aa12.1□□□□□ -0.47
SCN5A-205ENST00000423572 DYMQ7RTS9 669 aa12.1□□□□□ -0.47
SCN5A-205ENST00000423572 SCN4BQ8IWT1 228 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms