RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 SNAI1O95863 264 aaPredicted RBP18.22■□□□□ 0.51
SPC24-201ENST00000423327 ZNF865P0CJ78 1059 aaPredicted RBP18.22■□□□□ 0.51
SPC24-201ENST00000423327 FDX1P10109 184 aa18.22■□□□□ 0.51
SPC24-201ENST00000423327 IMMTQ16891 758 aaKnown RBP18.22■□□□□ 0.51
SPC24-201ENST00000423327 MUM1L1Q5H9M0 696 aa18.22■□□□□ 0.51
SPC24-201ENST00000423327 HABP4Q5JVS0 413 aaKnown RBP18.22■□□□□ 0.51
SPC24-201ENST00000423327 CCDC174Q6PII3 467 aa18.22■□□□□ 0.51
SPC24-201ENST00000423327 LENG1Q96BZ8 264 aaPredicted RBP18.22■□□□□ 0.51
SPC24-201ENST00000423327 RANBP17Q9H2T7 1088 aaKnown RBP18.22■□□□□ 0.51
SPC24-201ENST00000423327 PRO3102Q9H379 93 aa18.22■□□□□ 0.51
SPC24-201ENST00000423327 A1CFQ9NQ94 594 aaKnown RBP18.22■□□□□ 0.51
SPC24-201ENST00000423327 RNF146Q9NTX7 359 aa18.22■□□□□ 0.51
SPC24-201ENST00000423327 CTDP1Q9Y5B0 961 aaPredicted RBP18.22■□□□□ 0.51
SPC24-201ENST00000423327 TAF6LQ9Y6J9 622 aa18.22■□□□□ 0.51
SPC24-201ENST00000423327 SGSM2O43147 1006 aa18.21■□□□□ 0.51
SPC24-201ENST00000423327 CNTN2Q02246 1040 aa18.21■□□□□ 0.51
SPC24-201ENST00000423327 ZNF543Q08ER8 600 aa18.21■□□□□ 0.51
SPC24-201ENST00000423327 LRRC26Q2I0M4 334 aa18.21■□□□□ 0.51
SPC24-201ENST00000423327 MAMDC4Q6UXC1 1216 aa18.21■□□□□ 0.51
SPC24-201ENST00000423327 CHRDL2Q6WN34 429 aa18.21■□□□□ 0.51
SPC24-201ENST00000423327 C7orf61Q8IZ16 206 aa18.21■□□□□ 0.51
SPC24-201ENST00000423327 DDX11Q96FC9 970 aa18.21■□□□□ 0.51
SPC24-201ENST00000423327 TTC14Q96N46 770 aa18.21■□□□□ 0.51
SPC24-201ENST00000423327 ACAD9Q9H845 621 aa18.21■□□□□ 0.51
SPC24-201ENST00000423327 GPCPD1Q9NPB8 672 aa18.21■□□□□ 0.51
SPC24-201ENST00000423327 FBXO40Q9UH90 709 aa18.21■□□□□ 0.51
SPC24-201ENST00000423327 ASTN1O14525 1302 aa18.21■□□□□ 0.51
SPC24-201ENST00000423327 DNAH12Q6ZR08 3092 aa18.2■□□□□ 0.5
SPC24-201ENST00000423327 SLC34A2O95436 690 aa18.2■□□□□ 0.5
SPC24-201ENST00000423327 GJC2Q5T442 439 aaPredicted RBP18.2■□□□□ 0.5
SPC24-201ENST00000423327 SYDE2Q5VT97 1194 aa18.2■□□□□ 0.5
SPC24-201ENST00000423327 DGKHQ86XP1 1220 aa18.2■□□□□ 0.5
SPC24-201ENST00000423327 ENAHQ8N8S7 591 aaPredicted RBP18.2■□□□□ 0.5
SPC24-201ENST00000423327 ZSWIM5Q9P217 1185 aa18.2■□□□□ 0.5
SPC24-201ENST00000423327 NRBP1Q9UHY1 535 aa18.2■□□□□ 0.5
SPC24-201ENST00000423327 CTNNA3Q9UI47 895 aa18.2■□□□□ 0.5
SPC24-201ENST00000423327 SYNGAP1Q96PV0 1343 aa18.2■□□□□ 0.5
SPC24-201ENST00000423327 DNM1LO00429 736 aa18.19■□□□□ 0.5
SPC24-201ENST00000423327 ICAM1P05362 532 aa18.19■□□□□ 0.5
SPC24-201ENST00000423327 CYP21A2P08686 494 aa18.19■□□□□ 0.5
SPC24-201ENST00000423327 ALAS1P13196 640 aa18.19■□□□□ 0.5
SPC24-201ENST00000423327 CYB5R4Q7L1T6 521 aa18.19■□□□□ 0.5
SPC24-201ENST00000423327 ZNF467Q7Z7K2 595 aaPredicted RBP18.19■□□□□ 0.5
SPC24-201ENST00000423327 ANKRD35Q8N283 1001 aa18.19■□□□□ 0.5
SPC24-201ENST00000423327 MSL3Q8N5Y2 521 aaKnown RBP18.19■□□□□ 0.5
SPC24-201ENST00000423327 FAM133AQ8N9E0 248 aa18.19■□□□□ 0.5
SPC24-201ENST00000423327 ANKS1AQ92625 1134 aa18.19■□□□□ 0.5
SPC24-201ENST00000423327 TRERF1Q96PN7 1200 aa18.19■□□□□ 0.5
SPC24-201ENST00000423327 ZSCAN10Q96SZ4 725 aaPredicted RBP18.19■□□□□ 0.5
SPC24-201ENST00000423327 CPVLQ9H3G5 476 aa18.19■□□□□ 0.5
SPC24-201ENST00000423327 NR2E3Q9Y5X4 410 aa18.19■□□□□ 0.5
SPC24-201ENST00000423327 DDX49Q9Y6V7 483 aaKnown RBP18.19■□□□□ 0.5
SPC24-201ENST00000423327 TNKSO95271 1327 aa18.19■□□□□ 0.5
SPC24-201ENST00000423327 SOWAHBA6NEL2 793 aa18.18■□□□□ 0.5
SPC24-201ENST00000423327 ADCY6O43306 1168 aa18.18■□□□□ 0.5
SPC24-201ENST00000423327 GOLGA8HP0CJ92 632 aa18.18■□□□□ 0.5
SPC24-201ENST00000423327 NT5C2P49902 561 aa18.18■□□□□ 0.5
SPC24-201ENST00000423327 LRRC41Q15345 812 aa18.18■□□□□ 0.5
SPC24-201ENST00000423327 TKFCQ3LXA3 575 aa18.18■□□□□ 0.5
SPC24-201ENST00000423327 STOX1Q6ZVD7 989 aa18.18■□□□□ 0.5
SPC24-201ENST00000423327 PNMA1Q8ND90 353 aa18.18■□□□□ 0.5
SPC24-201ENST00000423327 KATNBL1Q9H079 304 aa18.18■□□□□ 0.5
SPC24-201ENST00000423327 RBM27Q9P2N5 1060 aaKnown RBP18.18■□□□□ 0.5
SPC24-201ENST00000423327 CCPG1Q9ULG6 757 aa18.18■□□□□ 0.5
SPC24-201ENST00000423327 ZMYND8Q9ULU4 1186 aaPredicted RBP18.18■□□□□ 0.5
SPC24-201ENST00000423327 LAMA3Q16787 3333 aa18.17■□□□□ 0.5
SPC24-201ENST00000423327 SEC23AQ15436 765 aa18.17■□□□□ 0.5
SPC24-201ENST00000423327 ARMCX2Q7L311 632 aa18.17■□□□□ 0.5
SPC24-201ENST00000423327 IQCA1Q86XH1 822 aa18.17■□□□□ 0.5
SPC24-201ENST00000423327 RUFY2Q8WXA3 655 aa18.17■□□□□ 0.5
SPC24-201ENST00000423327 SENP6Q9GZR1 1112 aaPredicted RBP18.17■□□□□ 0.5
SPC24-201ENST00000423327 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.17■□□□□ 0.5
SPC24-201ENST00000423327 CYP39A1Q9NYL5 469 aa18.17■□□□□ 0.5
SPC24-201ENST00000423327 NFIBO00712 420 aa18.16■□□□□ 0.5
SPC24-201ENST00000423327 AKR1A1P14550 325 aa18.16■□□□□ 0.5
SPC24-201ENST00000423327 SYN1P17600 705 aa18.16■□□□□ 0.5
SPC24-201ENST00000423327 CENPQQ7L2Z9 268 aaPredicted RBP18.16■□□□□ 0.5
SPC24-201ENST00000423327 CCDC144CPQ8IYA2 1237 aa18.16■□□□□ 0.5
SPC24-201ENST00000423327 PURBQ96QR8 312 aaKnown RBP18.16■□□□□ 0.5
SPC24-201ENST00000423327 KRT23Q9C075 422 aa18.16■□□□□ 0.5
SPC24-201ENST00000423327 CNNM2Q9H8M5 875 aa18.16■□□□□ 0.5
SPC24-201ENST00000423327 CNPY2Q9Y2B0 182 aa18.16■□□□□ 0.5
SPC24-201ENST00000423327 POTEB2H3BUK9 544 aa18.15■□□□□ 0.5
SPC24-201ENST00000423327 ADAMTS4O75173 837 aa18.15■□□□□ 0.5
SPC24-201ENST00000423327 PGK1P00558 417 aa18.15■□□□□ 0.5
SPC24-201ENST00000423327 ATN1P54259 1190 aaPredicted RBP18.15■□□□□ 0.5
SPC24-201ENST00000423327 IRX5P78411 483 aaPredicted RBP18.15■□□□□ 0.5
SPC24-201ENST00000423327 CLEC4DQ8WXI8 215 aa18.15■□□□□ 0.5
SPC24-201ENST00000423327 MAP4K1Q92918 833 aa18.15■□□□□ 0.5
SPC24-201ENST00000423327 UBA5Q9GZZ9 404 aa18.15■□□□□ 0.5
SPC24-201ENST00000423327 XPNPEP3Q9NQH7 507 aa18.15■□□□□ 0.5
SPC24-201ENST00000423327 ZHX1Q9UKY1 873 aaPredicted RBP18.15■□□□□ 0.5
SPC24-201ENST00000423327 SZT2Q5T011 3432 aa18.14■□□□□ 0.5
SPC24-201ENST00000423327 MYADML2A6NDP7 307 aa18.14■□□□□ 0.49
SPC24-201ENST00000423327 RARBP10826 455 aa18.14■□□□□ 0.49
SPC24-201ENST00000423327 FXR1P51114 621 aaKnown RBP eCLIP18.14■□□□□ 0.49
SPC24-201ENST00000423327 ACVR2BQ13705 512 aa18.14■□□□□ 0.49
SPC24-201ENST00000423327 COL9A3Q14050 684 aaPredicted RBP18.14■□□□□ 0.49
SPC24-201ENST00000423327 CCDC178Q5BJE1 867 aa18.14■□□□□ 0.49
SPC24-201ENST00000423327 GPATCH4Q5T3I0 446 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms